FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2190, 531 aa 1>>>pF1KE2190 531 - 531 aa - 531 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4268+/-0.000948; mu= 9.6964+/- 0.057 mean_var=128.3916+/-25.613, 0's: 0 Z-trim(108.9): 10 B-trim: 0 in 0/51 Lambda= 0.113189 statistics sampled from 10502 (10505) to 10502 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.323), width: 16 Scan time: 3.390 The best scores are: opt bits E(32554) CCDS1382.1 CDC73 gene_id:79577|Hs108|chr1 ( 531) 3504 583.6 2e-166 >>CCDS1382.1 CDC73 gene_id:79577|Hs108|chr1 (531 aa) initn: 3504 init1: 3504 opt: 3504 Z-score: 3101.5 bits: 583.6 E(32554): 2e-166 Smith-Waterman score: 3504; 100.0% identity (100.0% similar) in 531 aa overlap (1-531:1-531) 10 20 30 40 50 60 pF1KE2 MADVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MADVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LFLLNNVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 STQVKRAADEVLAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 STQVKRAADEVLAEAKKPRIEDEECVRLDKERLAARLEGHKEGIVQTEQIRSLSEAMSVE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 KIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KIAAIKAKIMAKKRSTIKTDLDDDITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 TGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQPIPAAYNRYDQERFKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TGKNFSKNIFAILQSVKAREEGRAPEQRPAPNAAPVDPTLRTKQPIPAAYNRYDQERFKG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 KEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQPVPRPVSQARPPPNQKKGSRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KEETEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQPVPRPVSQARPPPNQKKGSRTP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 IIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 IIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAIS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 VTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKY 430 440 450 460 470 480 490 500 510 520 530 pF1KE2 DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHLRF ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 DEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHKSHLRF 490 500 510 520 530 531 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:45:37 2016 done: Sun Nov 6 18:45:37 2016 Total Scan time: 3.390 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]