FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3278, 696 aa 1>>>pF1KE3278 696 - 696 aa - 696 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6647+/-0.00124; mu= 17.7273+/- 0.074 mean_var=71.7180+/-14.405, 0's: 0 Z-trim(101.8): 35 B-trim: 276 in 1/49 Lambda= 0.151447 statistics sampled from 6674 (6680) to 6674 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.557), E-opt: 0.2 (0.205), width: 16 Scan time: 3.510 The best scores are: opt bits E(32554) CCDS1340.1 XPR1 gene_id:9213|Hs108|chr1 ( 696) 4670 1030.4 0 CCDS44284.1 XPR1 gene_id:9213|Hs108|chr1 ( 631) 2907 645.2 8.7e-185 >>CCDS1340.1 XPR1 gene_id:9213|Hs108|chr1 (696 aa) initn: 4670 init1: 4670 opt: 4670 Z-score: 5512.1 bits: 1030.4 E(32554): 0 Smith-Waterman score: 4670; 100.0% identity (100.0% similar) in 696 aa overlap (1-696:1-696) 10 20 30 40 50 60 pF1KE3 MKFAEHLSAHITPEWRKQYIQYEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MKFAEHLSAHITPEWRKQYIQYEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 TCEKELAKINTFYSEKLAEAQRRFATLQNELQSSLDAQKESTGVTTLRQRRKPVFHLSHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 TCEKELAKINTFYSEKLAEAQRRFATLQNELQSSLDAQKESTGVTTLRQRRKPVFHLSHE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ERVQHRNIKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVAHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 ERVQHRNIKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVAHV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CGIFIVLNITLVLAAVFKLETDRSIWPLIRIYRGGFLLIEFLFLLGINTYGWRQAGVNHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 CGIFIVLNITLVLAAVFKLETDRSIWPLIRIYRGGFLLIEFLFLLGINTYGWRQAGVNHV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 NPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSLE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 LKWDESKGLLPNNSEESGICHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LKWDESKGLLPNNSEESGICHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 GKYSTTFFMVTFAALYSTHKERGHSDTMVFFYLWIVFYIISSCYTLIWDLKMDWGLFDKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 GKYSTTFFMVTFAALYSTHKERGHSDTMVFFYLWIVFYIISSCYTLIWDLKMDWGLFDKN 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 AGENTFLREEIVYPQKAYYYCAIIEDVILRFAWTIQISITSTTLLPHSGDIIATVFAPLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AGENTFLREEIVYPQKAYYYCAIIEDVILRFAWTIQISITSTTLLPHSGDIIATVFAPLE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 VFRRFVWNFFRLENEHLNNCGEFRAVRDISVAPLNADDQTLLEQMMDQDDGVRNRQKNRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VFRRFVWNFFRLENEHLNNCGEFRAVRDISVAPLNADDQTLLEQMMDQDDGVRNRQKNRS 610 620 630 640 650 660 670 680 690 pF1KE3 WKYNQSISLRRPRLASQSKARDTKVLIEDTDDEANT :::::::::::::::::::::::::::::::::::: CCDS13 WKYNQSISLRRPRLASQSKARDTKVLIEDTDDEANT 670 680 690 >>CCDS44284.1 XPR1 gene_id:9213|Hs108|chr1 (631 aa) initn: 2907 init1: 2907 opt: 2907 Z-score: 3431.0 bits: 645.2 E(32554): 8.7e-185 Smith-Waterman score: 4079; 90.7% identity (90.7% similar) in 696 aa overlap (1-696:1-631) 10 20 30 40 50 60 pF1KE3 MKFAEHLSAHITPEWRKQYIQYEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MKFAEHLSAHITPEWRKQYIQYEAFKDMLYSAQDQAPSVEVTDEDTVKRYFAKFEEKFFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 TCEKELAKINTFYSEKLAEAQRRFATLQNELQSSLDAQKESTGVTTLRQRRKPVFHLSHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TCEKELAKINTFYSEKLAEAQRRFATLQNELQSSLDAQKESTGVTTLRQRRKPVFHLSHE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ERVQHRNIKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVAHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ERVQHRNIKDLKLAFSEFYLSLILLQNYQNLNFTGFRKILKKHDKILETSRGADWRVAHV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 EVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EVAPFYTCKKINQLISETEAVVTNELEDGDRQKAMKRLRVPPLGAAQPAPAWTTFRVGLF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CGIFIVLNITLVLAAVFKLETDRSIWPLIRIYRGGFLLIEFLFLLGINTYGWRQAGVNHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 CGIFIVLNITLVLAAVFKLETDRSIWPLIRIYRGGFLLIEFLFLLGINTYGWRQAGVNHV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 LIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LIFELNPRSNLSHQHLFEIAGFLGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 NPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 NPTKTFYYKSRFWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSLE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 LKWDESKGLLPNNSEESGICHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNA :::::::::::::::: CCDS44 LKWDESKGLLPNNSEE-------------------------------------------- 430 490 500 510 520 530 540 pF1KE3 GKYSTTFFMVTFAALYSTHKERGHSDTMVFFYLWIVFYIISSCYTLIWDLKMDWGLFDKN ::::::::::::::::::::::::::::::::::::::: CCDS44 ---------------------RGHSDTMVFFYLWIVFYIISSCYTLIWDLKMDWGLFDKN 440 450 460 470 550 560 570 580 590 600 pF1KE3 AGENTFLREEIVYPQKAYYYCAIIEDVILRFAWTIQISITSTTLLPHSGDIIATVFAPLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AGENTFLREEIVYPQKAYYYCAIIEDVILRFAWTIQISITSTTLLPHSGDIIATVFAPLE 480 490 500 510 520 530 610 620 630 640 650 660 pF1KE3 VFRRFVWNFFRLENEHLNNCGEFRAVRDISVAPLNADDQTLLEQMMDQDDGVRNRQKNRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VFRRFVWNFFRLENEHLNNCGEFRAVRDISVAPLNADDQTLLEQMMDQDDGVRNRQKNRS 540 550 560 570 580 590 670 680 690 pF1KE3 WKYNQSISLRRPRLASQSKARDTKVLIEDTDDEANT :::::::::::::::::::::::::::::::::::: CCDS44 WKYNQSISLRRPRLASQSKARDTKVLIEDTDDEANT 600 610 620 630 696 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:46:20 2016 done: Sun Nov 6 18:46:20 2016 Total Scan time: 3.510 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]