FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3883, 228 aa 1>>>pF1KE3883 228 - 228 aa - 228 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4975+/-0.000792; mu= 14.3996+/- 0.048 mean_var=76.2485+/-14.560, 0's: 0 Z-trim(107.4): 16 B-trim: 0 in 0/54 Lambda= 0.146879 statistics sampled from 9645 (9652) to 9645 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.289), width: 16 Scan time: 0.980 The best scores are: opt bits E(33420) CCDS1315.1 CACYBP gene_id:27101|Hs109|chr1 ( 228) 1451 316.4 1e-86 CCDS30942.1 CACYBP gene_id:27101|Hs109|chr1 ( 185) 1202 263.6 6.4e-71 >>CCDS1315.1 CACYBP gene_id:27101|Hs109|chr1 (228 aa) initn: 1451 init1: 1451 opt: 1451 Z-score: 1670.7 bits: 316.4 E(33420): 1e-86 Smith-Waterman score: 1451; 100.0% identity (100.0% similar) in 228 aa overlap (1-228:1-228) 10 20 30 40 50 60 pF1KE3 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 AAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 AAVVAPITTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 NGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPS 130 140 150 160 170 180 190 200 210 220 pF1KE3 YDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF :::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 YDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF 190 200 210 220 >>CCDS30942.1 CACYBP gene_id:27101|Hs109|chr1 (185 aa) initn: 1202 init1: 1202 opt: 1202 Z-score: 1386.9 bits: 263.6 E(33420): 6.4e-71 Smith-Waterman score: 1202; 100.0% identity (100.0% similar) in 185 aa overlap (44-228:1-185) 20 30 40 50 60 70 pF1KE3 KVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAAVVAPITTGYTV :::::::::::::::::::::::::::::: CCDS30 MQQKSQKKAELLDNEKPAAVVAPITTGYTV 10 20 30 80 90 100 110 120 130 pF1KE3 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLL 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE3 KPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 KPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDPSEGLMN 100 110 120 130 140 150 200 210 220 pF1KE3 VLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF ::::::::::::::::::::::::::::::::::: CCDS30 VLKKIYEDGDDDMKRTINKAWVESREKQAKGDTEF 160 170 180 228 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Aug 4 20:38:43 2021 done: Wed Aug 4 20:38:43 2021 Total Scan time: 0.980 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]