FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1904, 434 aa 1>>>pF1KE1904 434 - 434 aa - 434 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6922+/-0.000767; mu= 16.3161+/- 0.047 mean_var=78.7511+/-15.838, 0's: 0 Z-trim(109.1): 16 B-trim: 0 in 0/49 Lambda= 0.144526 statistics sampled from 10667 (10674) to 10667 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.328), width: 16 Scan time: 3.080 The best scores are: opt bits E(32554) CCDS1257.1 MAEL gene_id:84944|Hs108|chr1 ( 434) 2976 629.9 1.5e-180 CCDS72975.1 MAEL gene_id:84944|Hs108|chr1 ( 378) 2598 551.0 7.1e-157 CCDS65712.1 MAEL gene_id:84944|Hs108|chr1 ( 403) 2470 524.3 8.1e-149 >>CCDS1257.1 MAEL gene_id:84944|Hs108|chr1 (434 aa) initn: 2976 init1: 2976 opt: 2976 Z-score: 3354.9 bits: 629.9 E(32554): 1.5e-180 Smith-Waterman score: 2976; 99.8% identity (100.0% similar) in 434 aa overlap (1-434:1-434) 10 20 30 40 50 60 pF1KE1 MPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWALLREEEKEKYAEMARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWALLREEEKEKYAEMARE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 WRAAQGKDPGPSEKQKPVFTPLRRPGMLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 WRAAQGKDPGPSEKQKPVFTPLRRPGMLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 FSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 FSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 IPISNFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 IPISNFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 QLLTVEDLVVGIYQQKFLKEPSKTWIRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QLLTVEDLVVGIYQQKFLKEPSKTWIRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 KIAYCISNSLATLFGIQLTEAHVPLQDYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. CCDS12 KIAYCISNSLATLFGIQLTEAHVPLQDYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 SSNEEQRSNTPIGDYPSRAKISGQNSSVRGRGITRLLESISNSSSNIHKFSNCDTSLSPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SSNEEQRSNTPIGDYPSRAKISGQNSSVRGRGITRLLESISNSSSNIHKFSNCDTSLSPY 370 380 390 400 410 420 430 pF1KE1 MSQKDGYKSFSSLS :::::::::::::: CCDS12 MSQKDGYKSFSSLS 430 >>CCDS72975.1 MAEL gene_id:84944|Hs108|chr1 (378 aa) initn: 2598 init1: 2598 opt: 2598 Z-score: 2929.8 bits: 551.0 E(32554): 7.1e-157 Smith-Waterman score: 2598; 99.7% identity (100.0% similar) in 378 aa overlap (57-434:1-378) 30 40 50 60 70 80 pF1KE1 LPVARVADAIPYCSSDWALLREEEKEKYAEMAREWRAAQGKDPGPSEKQKPVFTPLRRPG :::::::::::::::::::::::::::::: CCDS72 MAREWRAAQGKDPGPSEKQKPVFTPLRRPG 10 20 30 90 100 110 120 130 140 pF1KE1 MLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNIFSHGELPPHCEQRFLPCEIGCVKYSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNIFSHGELPPHCEQRFLPCEIGCVKYSL 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE1 QEGIMADFHSFINPGEIPRGFRFHCQAASDSSHKIPISNFERGHNQATVLQNLYRFIHPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 QEGIMADFHSFINPGEIPRGFRFHCQAASDSSHKIPISNFERGHNQATVLQNLYRFIHPN 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE1 PGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 PGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDLQLLTVEDLVVGIYQQKFLKEPSKTWI 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE1 RSLLDVAMWDYSSNTRCKWHEENDILFCALAVCKKIAYCISNSLATLFGIQLTEAHVPLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 RSLLDVAMWDYSSNTRCKWHEENDILFCALAVCKKIAYCISNSLATLFGIQLTEAHVPLQ 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE1 DYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFSSSNEEQRSNTPIGDYPSRAKISGQNS :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: CCDS72 DYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFNSSNEEQRSNTPIGDYPSRAKISGQNS 280 290 300 310 320 330 390 400 410 420 430 pF1KE1 SVRGRGITRLLESISNSSSNIHKFSNCDTSLSPYMSQKDGYKSFSSLS :::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 SVRGRGITRLLESISNSSSNIHKFSNCDTSLSPYMSQKDGYKSFSSLS 340 350 360 370 >>CCDS65712.1 MAEL gene_id:84944|Hs108|chr1 (403 aa) initn: 2463 init1: 2463 opt: 2470 Z-score: 2785.2 bits: 524.3 E(32554): 8.1e-149 Smith-Waterman score: 2694; 92.6% identity (92.9% similar) in 434 aa overlap (1-434:1-403) 10 20 30 40 50 60 pF1KE1 MPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWALLREEEKEKYAEMARE :::::::::::::::::::::::::::::::::::::::::::: CCDS65 MPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWA---------------- 10 20 30 40 70 80 90 100 110 120 pF1KE1 WRAAQGKDPGPSEKQKPVFTPLRRPGMLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNI ::::::::::::::::::::::::::::::::::::::::::::: CCDS65 ---------------KPVFTPLRRPGMLVPKQNVSPPDMSALSLKGDQALLGGIFYFLNI 50 60 70 80 130 140 150 160 170 180 pF1KE1 FSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 FSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHCQAASDSSHK 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE1 IPISNFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 IPISNFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDL 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE1 QLLTVEDLVVGIYQQKFLKEPSKTWIRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 QLLTVEDLVVGIYQQKFLKEPSKTWIRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCK 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE1 KIAYCISNSLATLFGIQLTEAHVPLQDYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. CCDS65 KIAYCISNSLATLFGIQLTEAHVPLQDYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFN 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE1 SSNEEQRSNTPIGDYPSRAKISGQNSSVRGRGITRLLESISNSSSNIHKFSNCDTSLSPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 SSNEEQRSNTPIGDYPSRAKISGQNSSVRGRGITRLLESISNSSSNIHKFSNCDTSLSPY 330 340 350 360 370 380 430 pF1KE1 MSQKDGYKSFSSLS :::::::::::::: CCDS65 MSQKDGYKSFSSLS 390 400 434 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:49:04 2016 done: Sun Nov 6 18:49:04 2016 Total Scan time: 3.080 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]