FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1638, 152 aa 1>>>pF1KE1638 152 - 152 aa - 152 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0198+/-0.000699; mu= 12.6874+/- 0.042 mean_var=55.0481+/-11.092, 0's: 0 Z-trim(108.0): 11 B-trim: 0 in 0/51 Lambda= 0.172863 statistics sampled from 9896 (9902) to 9896 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.304), width: 16 Scan time: 1.260 The best scores are: opt bits E(32554) CCDS1249.1 MGST3 gene_id:4259|Hs108|chr1 ( 152) 1030 264.5 1.8e-71 >>CCDS1249.1 MGST3 gene_id:4259|Hs108|chr1 (152 aa) initn: 1030 init1: 1030 opt: 1030 Z-score: 1396.4 bits: 264.5 E(32554): 1.8e-71 Smith-Waterman score: 1030; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152) 10 20 30 40 50 60 pF1KE1 MAVLSKEYGFVLLTGAASFIMVAHLAINVSKARKKYKVEYPIMYSTDPENGHIFNCIQRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAVLSKEYGFVLLTGAASFIMVAHLAINVSKARKKYKVEYPIMYSTDPENGHIFNCIQRA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HQNTLEVYPPFLFFLAVGGVYHPRIASGLGLAWIVGRVLYAYGYYTGEPSKRSRGALGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 HQNTLEVYPPFLFFLAVGGVYHPRIASGLGLAWIVGRVLYAYGYYTGEPSKRSRGALGSI 70 80 90 100 110 120 130 140 150 pF1KE1 ALLGLVGTTVCSAFQHLGWVKSGLGSGPKCCH :::::::::::::::::::::::::::::::: CCDS12 ALLGLVGTTVCSAFQHLGWVKSGLGSGPKCCH 130 140 150 152 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:50:13 2016 done: Sun Nov 6 18:50:14 2016 Total Scan time: 1.260 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]