FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5145, 100 aa 1>>>pF1KE5145 100 - 100 aa - 100 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6874+/-0.000514; mu= 14.0385+/- 0.031 mean_var=67.9154+/-13.358, 0's: 0 Z-trim(115.2): 2 B-trim: 0 in 0/50 Lambda= 0.155629 statistics sampled from 15763 (15765) to 15763 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.841), E-opt: 0.2 (0.484), width: 16 Scan time: 1.510 The best scores are: opt bits E(32554) CCDS1134.1 BGLAP gene_id:632|Hs108|chr1 ( 100) 684 160.7 1.3e-40 >>CCDS1134.1 BGLAP gene_id:632|Hs108|chr1 (100 aa) initn: 684 init1: 684 opt: 684 Z-score: 842.4 bits: 160.7 E(32554): 1.3e-40 Smith-Waterman score: 684; 100.0% identity (100.0% similar) in 100 aa overlap (1-100:1-100) 10 20 30 40 50 60 pF1KE5 MRALTLLALLALAALCIAGQAGAKPSGAESSKGAAFVSKQEGSEVVKRPRRYLYQWLGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MRALTLLALLALAALCIAGQAGAKPSGAESSKGAAFVSKQEGSEVVKRPRRYLYQWLGAP 10 20 30 40 50 60 70 80 90 100 pF1KE5 VPYPDPLEPRREVCELNPDCDELADHIGFQEAYRRFYGPV :::::::::::::::::::::::::::::::::::::::: CCDS11 VPYPDPLEPRREVCELNPDCDELADHIGFQEAYRRFYGPV 70 80 90 100 100 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:20:30 2016 done: Tue Nov 8 07:20:30 2016 Total Scan time: 1.510 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]