FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9283, 192 aa 1>>>pF1KE9283 192 - 192 aa - 192 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1451+/-0.000718; mu= 13.3226+/- 0.043 mean_var=58.1479+/-11.469, 0's: 0 Z-trim(107.9): 11 B-trim: 0 in 0/52 Lambda= 0.168193 statistics sampled from 9844 (9848) to 9844 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.303), width: 16 Scan time: 1.580 The best scores are: opt bits E(32554) CCDS1073.1 PMVK gene_id:10654|Hs108|chr1 ( 192) 1299 323.1 6.4e-89 >>CCDS1073.1 PMVK gene_id:10654|Hs108|chr1 (192 aa) initn: 1299 init1: 1299 opt: 1299 Z-score: 1709.9 bits: 323.1 E(32554): 6.4e-89 Smith-Waterman score: 1299; 100.0% identity (100.0% similar) in 192 aa overlap (1-192:1-192) 10 20 30 40 50 60 pF1KE9 MAPLGGAPRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MAPLGGAPRLVLLFSGKRKSGKDFVTEALQSRLGADVCAVLRLSGPLKEQYAQEHGLNFQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 RLLDTSTYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGISQPIWLVSDTRRVSDIQWFRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RLLDTSTYKEAFRKDMIRWGEEKRQADPGFFCRKIVEGISQPIWLVSDTRRVSDIQWFRE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 AYGAVTQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AYGAVTQTVRVVALEQSRQQRGWVFTPGVDDAESECGLDNFGDFDWVIENHGVEQRLEEQ 130 140 150 160 170 180 190 pF1KE9 LENLIEFIRSRL :::::::::::: CCDS10 LENLIEFIRSRL 190 192 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:19:43 2016 done: Tue Nov 8 10:19:44 2016 Total Scan time: 1.580 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]