FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1622, 136 aa 1>>>pF1KE1622 136 - 136 aa - 136 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4871+/-0.000596; mu= 11.2972+/- 0.036 mean_var=80.7205+/-16.020, 0's: 0 Z-trim(113.5): 4 B-trim: 3 in 1/49 Lambda= 0.142752 statistics sampled from 14157 (14160) to 14157 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.435), width: 16 Scan time: 1.800 The best scores are: opt bits E(32554) CCDS1049.1 SNAPIN gene_id:23557|Hs108|chr1 ( 136) 875 188.5 1.1e-48 >>CCDS1049.1 SNAPIN gene_id:23557|Hs108|chr1 (136 aa) initn: 875 init1: 875 opt: 875 Z-score: 987.8 bits: 188.5 E(32554): 1.1e-48 Smith-Waterman score: 875; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136) 10 20 30 40 50 60 pF1KE1 MAGAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHVHAVRESQVELREQIDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MAGAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHVHAVRESQVELREQIDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LATELCRINEDQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHSVAKETARR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LATELCRINEDQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHSVAKETARR 70 80 90 100 110 120 130 pF1KE1 RAMLDSGIYPPGSPGK :::::::::::::::: CCDS10 RAMLDSGIYPPGSPGK 130 136 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:54:04 2016 done: Sun Nov 6 18:54:04 2016 Total Scan time: 1.800 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]