Result of FASTA (omim) for
pFN21AE6506
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6506, 104 aa
1>>>pF1KE6506 104 - 104 aa - 104 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0212+/-0.000293; mu= 11.1567+/- 0.018
mean_var=62.5276+/-12.447, 0's: 0 Z-trim(117.6): 46 B-trim: 1292 in 1/55
Lambda= 0.162195
statistics sampled from 29610 (29664) to 29610 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.753), E-opt: 0.2 (0.348), width: 16
Scan time: 4.430
The best scores are: opt bits E(85289)
NP_065723 (OMIM: 607986) protein S100-A14 [Homo sa ( 104) 692 169.6 8e-43
XP_016857364 (OMIM: 607986) PREDICTED: protein S10 ( 104) 692 169.6 8e-43
XP_005245419 (OMIM: 607986) PREDICTED: protein S10 ( 104) 692 169.6 8e-43
XP_005245491 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
NP_001019384 (OMIM: 601989) protein S100-A13 [Homo ( 98) 237 63.1 8.6e-11
XP_016857525 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
XP_011508166 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
NP_001019383 (OMIM: 601989) protein S100-A13 [Homo ( 98) 237 63.1 8.6e-11
XP_016857524 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
NP_001019381 (OMIM: 601989) protein S100-A13 [Homo ( 98) 237 63.1 8.6e-11
XP_011508165 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
NP_005970 (OMIM: 601989) protein S100-A13 [Homo sa ( 98) 237 63.1 8.6e-11
NP_001019382 (OMIM: 601989) protein S100-A13 [Homo ( 98) 237 63.1 8.6e-11
XP_011508164 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
XP_016857523 (OMIM: 601989) PREDICTED: protein S10 ( 98) 237 63.1 8.6e-11
NP_002956 (OMIM: 123886) protein S100-A9 [Homo sap ( 114) 141 40.7 0.00056
NP_062427 (OMIM: 114210) protein S100-A4 [Homo sap ( 101) 140 40.4 0.0006
NP_002952 (OMIM: 114210) protein S100-A4 [Homo sap ( 101) 140 40.4 0.0006
NP_002957 (OMIM: 114085) protein S100-A10 [Homo sa ( 97) 136 39.5 0.0011
NP_006263 (OMIM: 176990) protein S100-B [Homo sapi ( 92) 128 37.6 0.0039
XP_016883913 (OMIM: 176990) PREDICTED: protein S10 ( 92) 128 37.6 0.0039
NP_005969 (OMIM: 176993) protein S100-A2 [Homo sap ( 97) 128 37.6 0.0041
NP_005612 (OMIM: 603112) protein S100-A12 [Homo sa ( 92) 127 37.4 0.0046
XP_011508162 (OMIM: 176991) PREDICTED: protein S10 ( 104) 126 37.2 0.006
NP_002953 (OMIM: 176991) protein S100-A5 [Homo sap ( 92) 123 36.4 0.0088
XP_016857521 (OMIM: 176991) PREDICTED: protein S10 ( 92) 123 36.4 0.0088
XP_016857520 (OMIM: 176991) PREDICTED: protein S10 ( 92) 123 36.4 0.0088
>>NP_065723 (OMIM: 607986) protein S100-A14 [Homo sapien (104 aa)
initn: 692 init1: 692 opt: 692 Z-score: 889.8 bits: 169.6 E(85289): 8e-43
Smith-Waterman score: 692; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS
10 20 30 40 50 60
70 80 90 100
pF1KE6 NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
::::::::::::::::::::::::::::::::::::::::::::
NP_065 NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
70 80 90 100
>>XP_016857364 (OMIM: 607986) PREDICTED: protein S100-A1 (104 aa)
initn: 692 init1: 692 opt: 692 Z-score: 889.8 bits: 169.6 E(85289): 8e-43
Smith-Waterman score: 692; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS
10 20 30 40 50 60
70 80 90 100
pF1KE6 NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
::::::::::::::::::::::::::::::::::::::::::::
XP_016 NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
70 80 90 100
>>XP_005245419 (OMIM: 607986) PREDICTED: protein S100-A1 (104 aa)
initn: 692 init1: 692 opt: 692 Z-score: 889.8 bits: 169.6 E(85289): 8e-43
Smith-Waterman score: 692; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)
10 20 30 40 50 60
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSVEGGKETLTPSELRDLVTQQLPHLMPS
10 20 30 40 50 60
70 80 90 100
pF1KE6 NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
::::::::::::::::::::::::::::::::::::::::::::
XP_005 NCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
70 80 90 100
>>XP_005245491 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
XP_005 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
XP_005 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
>>NP_001019384 (OMIM: 601989) protein S100-A13 [Homo sap (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
NP_001 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
NP_001 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
>>XP_016857525 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
XP_016 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
XP_016 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
>>XP_011508166 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
XP_011 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
XP_011 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
>>NP_001019383 (OMIM: 601989) protein S100-A13 [Homo sap (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
NP_001 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
NP_001 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
>>XP_016857524 (OMIM: 601989) PREDICTED: protein S100-A1 (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
XP_016 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
XP_016 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
>>NP_001019381 (OMIM: 601989) protein S100-A13 [Homo sap (98 aa)
initn: 227 init1: 202 opt: 237 Z-score: 314.7 bits: 63.1 E(85289): 8.6e-11
Smith-Waterman score: 237; 38.0% identity (77.2% similar) in 92 aa overlap (12-102:3-94)
10 20 30 40 50
pF1KE6 MGQCRSANAEDAQEFSDVERAIETLIKNFHQYSV-EGGKETLTPSELRDLVTQQLPHLMP
:. ....:..:::.. .: .. :: :..:. .:...:::::::::.
NP_001 MAAEPLTELEESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK
10 20 30 40 50
60 70 80 90 100
pF1KE6 SNCGLEEKIANLGSCNDSKLEFRSFWELIGEAAKSVKLERPVRGH
. .:.::. .: .::.:.: .:.:::: :: .. .. ..
NP_001 DVGSLDEKMKSLDVNQDSELKFNEYWRLIGELAKEIRKKKDLKIRKK
60 70 80 90
104 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 03:57:22 2016 done: Tue Nov 8 03:57:22 2016
Total Scan time: 4.430 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]