Result of FASTA (ccds) for
pFN21AE6570
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6570, 117 aa
1>>>pF1KE6570 117 - 117 aa - 117 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0406+/-0.000566; mu= 8.1546+/- 0.034
mean_var=85.4292+/-16.675, 0's: 0 Z-trim(114.8): 11 B-trim: 69 in 1/52
Lambda= 0.138762
statistics sampled from 15388 (15399) to 15388 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.473), width: 16
Scan time: 1.270
The best scores are: opt bits E(32554)
CCDS963.1 ENSA gene_id:2029|Hs108|chr1 ( 117) 763 161.0 1.5e-40
CCDS958.1 ENSA gene_id:2029|Hs108|chr1 ( 121) 763 161.0 1.6e-40
CCDS964.1 ENSA gene_id:2029|Hs108|chr1 ( 113) 643 137.0 2.5e-33
CCDS961.1 ENSA gene_id:2029|Hs108|chr1 ( 117) 643 137.0 2.6e-33
CCDS32242.1 ARPP19 gene_id:10776|Hs108|chr15 ( 112) 554 119.2 5.8e-28
CCDS81883.1 ARPP19 gene_id:10776|Hs108|chr15 ( 96) 536 115.5 6.1e-27
CCDS76757.1 ARPP19 gene_id:10776|Hs108|chr15 ( 131) 537 115.8 6.9e-27
CCDS965.1 ENSA gene_id:2029|Hs108|chr1 ( 105) 389 86.1 4.8e-18
CCDS962.1 ENSA gene_id:2029|Hs108|chr1 ( 133) 389 86.2 5.8e-18
CCDS959.1 ENSA gene_id:2029|Hs108|chr1 ( 137) 389 86.2 6e-18
CCDS960.1 ENSA gene_id:2029|Hs108|chr1 ( 133) 374 83.2 4.7e-17
>>CCDS963.1 ENSA gene_id:2029|Hs108|chr1 (117 aa)
initn: 763 init1: 763 opt: 763 Z-score: 841.4 bits: 161.0 E(32554): 1.5e-40
Smith-Waterman score: 763; 99.1% identity (99.1% similar) in 117 aa overlap (1-117:1-117)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS96 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
70 80 90 100 110
>>CCDS958.1 ENSA gene_id:2029|Hs108|chr1 (121 aa)
initn: 763 init1: 763 opt: 763 Z-score: 841.2 bits: 161.0 E(32554): 1.6e-40
Smith-Waterman score: 763; 99.1% identity (99.1% similar) in 117 aa overlap (1-117:1-117)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS95 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV
70 80 90 100 110 120
CCDS95 E
>>CCDS964.1 ENSA gene_id:2029|Hs108|chr1 (113 aa)
initn: 643 init1: 643 opt: 643 Z-score: 711.8 bits: 137.0 E(32554): 2.5e-33
Smith-Waterman score: 643; 98.0% identity (99.0% similar) in 99 aa overlap (19-117:15-113)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.:: ::::::::::::::::::::::::::::::::::::::
CCDS96 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
60 70 80 90 100 110
>>CCDS961.1 ENSA gene_id:2029|Hs108|chr1 (117 aa)
initn: 643 init1: 643 opt: 643 Z-score: 711.6 bits: 137.0 E(32554): 2.6e-33
Smith-Waterman score: 643; 98.0% identity (99.0% similar) in 99 aa overlap (19-117:15-113)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.:: ::::::::::::::::::::::::::::::::::::::
CCDS96 MAGGLGCDVCYWFVEDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV
60 70 80 90 100 110
CCDS96 E
>>CCDS32242.1 ARPP19 gene_id:10776|Hs108|chr15 (112 aa)
initn: 552 init1: 535 opt: 554 Z-score: 615.6 bits: 119.2 E(32554): 5.8e-28
Smith-Waterman score: 554; 76.4% identity (88.2% similar) in 110 aa overlap (8-117:4-112)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
: : ..::... .: . ::.::::::::.:: ::::::::::: :::::
CCDS32 MSAEVPEAASAEEQKE-MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30 40 50
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
CCDS32 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
60 70 80 90 100 110
>>CCDS81883.1 ARPP19 gene_id:10776|Hs108|chr15 (96 aa)
initn: 535 init1: 535 opt: 536 Z-score: 597.1 bits: 115.5 E(32554): 6.1e-27
Smith-Waterman score: 536; 83.3% identity (91.7% similar) in 96 aa overlap (22-117:1-96)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
.: . ::.::::::::.:: ::::::::::: :::::
CCDS81 MEDKVTSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQK
10 20 30
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:::::::::::::::::::::::.:.:::. :::::::::::::::: :::.:::::
CCDS81 GQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG
40 50 60 70 80 90
>>CCDS76757.1 ARPP19 gene_id:10776|Hs108|chr15 (131 aa)
initn: 551 init1: 535 opt: 537 Z-score: 596.1 bits: 115.8 E(32554): 6.9e-27
Smith-Waterman score: 537; 81.6% identity (90.8% similar) in 98 aa overlap (20-117:34-131)
10 20 30 40
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPG
. .: . ::.::::::::.:: ::::::
CCDS76 EVPEAASAEEQKSEHNMLPWSLQPSIPNSLEEMEDKVTSPEKAEEAKLKARYPHLGQKPG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE6 GSDFLMKRLQKGQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSS
::::: ::::::::::::::::::::::::::::.:.:::. :::::::::::::::: :
CCDS76 GSDFLRKRLQKGQKYFDSGDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPS
70 80 90 100 110 120
110
pF1KE6 LVTSKLAG
::.:::::
CCDS76 LVASKLAG
130
>>CCDS965.1 ENSA gene_id:2029|Hs108|chr1 (105 aa)
initn: 389 init1: 389 opt: 389 Z-score: 437.5 bits: 86.1 E(32554): 4.8e-18
Smith-Waterman score: 389; 98.4% identity (98.4% similar) in 61 aa overlap (1-61:1-61)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS96 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100 110
pF1KE6 GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
:
CCDS96 GVWGIVSYPLSLELKEVLRMKSVEVLLDPFLEVLLLNRSRGEFEI
70 80 90 100
>>CCDS962.1 ENSA gene_id:2029|Hs108|chr1 (133 aa)
initn: 749 init1: 389 opt: 389 Z-score: 435.9 bits: 86.2 E(32554): 5.8e-18
Smith-Waterman score: 721; 87.2% identity (87.2% similar) in 133 aa overlap (1-117:1-133)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS96 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100
pF1KE6 G----------------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP
: :::::::::::::::::::::::::::::::::::::::::::
CCDS96 GDYKSLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP
70 80 90 100 110 120
110
pF1KE6 QRKSSLVTSKLAG
:::::::::::::
CCDS96 QRKSSLVTSKLAG
130
>>CCDS959.1 ENSA gene_id:2029|Hs108|chr1 (137 aa)
initn: 749 init1: 389 opt: 389 Z-score: 435.7 bits: 86.2 E(32554): 6e-18
Smith-Waterman score: 721; 87.2% identity (87.2% similar) in 133 aa overlap (1-117:1-133)
10 20 30 40 50 60
pF1KE6 MSQKQEEENPAEETGEEKQDTLEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS95 MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
10 20 30 40 50 60
70 80 90 100
pF1KE6 G----------------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP
: :::::::::::::::::::::::::::::::::::::::::::
CCDS95 GDYKSLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP
70 80 90 100 110 120
110
pF1KE6 QRKSSLVTSKLAG
:::::::::::::
CCDS95 QRKSSLVTSKLAGGQVE
130
117 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 14:29:41 2016 done: Tue Nov 8 14:29:41 2016
Total Scan time: 1.270 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]