FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3879, 976 aa 1>>>pF1KE3879 976 - 976 aa - 976 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 14.7931+/-0.00183; mu= -22.9352+/- 0.107 mean_var=554.6399+/-120.961, 0's: 0 Z-trim(106.7): 223 B-trim: 461 in 1/51 Lambda= 0.054459 statistics sampled from 9105 (9279) to 9105 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.278), width: 16 Scan time: 2.320 The best scores are: opt bits E(33420) CCDS879.1 SYCP1 gene_id:6847|Hs109|chr1 ( 976) 6102 495.8 1.8e-139 CCDS72840.1 SYCP1 gene_id:6847|Hs109|chr1 ( 951) 4685 384.4 5.9e-106 >>CCDS879.1 SYCP1 gene_id:6847|Hs109|chr1 (976 aa) initn: 6102 init1: 6102 opt: 6102 Z-score: 2617.5 bits: 495.8 E(33420): 1.8e-139 Smith-Waterman score: 6102; 100.0% identity (100.0% similar) in 976 aa overlap (1-976:1-976) 10 20 30 40 50 60 pF1KE3 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 YDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 YDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA 910 920 930 940 950 960 970 pF1KE3 KMDRKKKLKEAEKLFV :::::::::::::::: CCDS87 KMDRKKKLKEAEKLFV 970 >>CCDS72840.1 SYCP1 gene_id:6847|Hs109|chr1 (951 aa) initn: 4677 init1: 4677 opt: 4685 Z-score: 2016.0 bits: 384.4 E(33420): 5.9e-106 Smith-Waterman score: 5900; 97.4% identity (97.4% similar) in 976 aa overlap (1-976:1-951) 10 20 30 40 50 60 pF1KE3 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 YDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE :::::::::::::::::::::::::::::: ::::: CCDS72 YDKIIEERDSELGLYKSKEQEQSSLRASLE-------------------------KLKRE 730 740 750 790 800 810 820 830 840 pF1KE3 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW 760 770 780 790 800 810 850 860 870 880 890 900 pF1KE3 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL 820 830 840 850 860 870 910 920 930 940 950 960 pF1KE3 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA 880 890 900 910 920 930 970 pF1KE3 KMDRKKKLKEAEKLFV :::::::::::::::: CCDS72 KMDRKKKLKEAEKLFV 940 950 976 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Aug 4 20:36:48 2021 done: Wed Aug 4 20:36:48 2021 Total Scan time: 2.320 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]