FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1707, 207 aa 1>>>pF1KE1707 207 - 207 aa - 207 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9315+/-0.000468; mu= 2.3031+/- 0.029 mean_var=175.8777+/-34.305, 0's: 0 Z-trim(114.5): 32 B-trim: 290 in 1/53 Lambda= 0.096709 statistics sampled from 24394 (24415) to 24394 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.286), width: 16 Scan time: 6.320 The best scores are: opt bits E(85289) NP_079349 (OMIM: 611656) suppressor of IKBKE 1 iso ( 207) 1305 193.9 1.6e-49 NP_001095866 (OMIM: 611656) suppressor of IKBKE 1 ( 211) 1287 191.4 9.2e-49 NP_001165358 (OMIM: 608858) FGFR1 oncogene partner ( 215) 667 104.9 1e-22 NP_001165359 (OMIM: 608858) FGFR1 oncogene partner ( 172) 454 75.1 7.6e-14 NP_056448 (OMIM: 608858) FGFR1 oncogene partner 2 ( 253) 454 75.2 1e-13 >>NP_079349 (OMIM: 611656) suppressor of IKBKE 1 isoform (207 aa) initn: 1305 init1: 1305 opt: 1305 Z-score: 1010.1 bits: 193.9 E(85289): 1.6e-49 Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLMVAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLMVAKK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELENKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 AVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELENKEL 130 140 150 160 170 180 190 200 pF1KE1 RELLSISSESLQARKENSMDTASQAIK ::::::::::::::::::::::::::: NP_079 RELLSISSESLQARKENSMDTASQAIK 190 200 >>NP_001095866 (OMIM: 611656) suppressor of IKBKE 1 isof (211 aa) initn: 978 init1: 978 opt: 1287 Z-score: 996.5 bits: 191.4 E(85289): 9.2e-49 Smith-Waterman score: 1287; 98.1% identity (98.1% similar) in 211 aa overlap (1-207:1-211) 10 20 30 40 50 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQ----YQE ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: NP_001 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQVRQRYQE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 DASDMKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DASDMKDMSKYKPHILLSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE 130 140 150 160 170 180 180 190 200 pF1KE1 NKELRELLSISSESLQARKENSMDTASQAIK ::::::::::::::::::::::::::::::: NP_001 NKELRELLSISSESLQARKENSMDTASQAIK 190 200 210 >>NP_001165358 (OMIM: 608858) FGFR1 oncogene partner 2 i (215 aa) initn: 727 init1: 441 opt: 667 Z-score: 528.8 bits: 104.9 E(85289): 1e-22 Smith-Waterman score: 667; 51.4% identity (81.2% similar) in 208 aa overlap (1-203:1-200) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. NP_001 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE 10 20 30 40 50 70 80 90 100 110 pF1KE1 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. NP_001 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE .:.: : ..: ...:: :.....:.: ::. :::::...:..: :: ::.. ::: : NP_001 MASKKDDPGIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQE 120 130 140 150 160 170 180 190 200 pF1KE1 NKELRELLSISSES-LQARKENSMDTASQAIK :: :::.:.:. :: :. ::... ...: NP_001 NKGLREILQITRESFLNLRKDDASESTSLSALVTNSDLSLRKS 180 190 200 210 >>NP_001165359 (OMIM: 608858) FGFR1 oncogene partner 2 i (172 aa) initn: 474 init1: 243 opt: 454 Z-score: 369.6 bits: 75.1 E(85289): 7.6e-14 Smith-Waterman score: 454; 53.2% identity (80.6% similar) in 139 aa overlap (1-135:1-131) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. NP_001 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE 10 20 30 40 50 70 80 90 100 110 pF1KE1 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. NP_001 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE .:.: : ..: ...:: NP_001 MASKKDDPGIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNVH 120 130 140 150 160 170 >>NP_056448 (OMIM: 608858) FGFR1 oncogene partner 2 isof (253 aa) initn: 630 init1: 243 opt: 454 Z-score: 367.3 bits: 75.2 E(85289): 1e-13 Smith-Waterman score: 574; 44.0% identity (68.5% similar) in 241 aa overlap (1-198:1-233) 10 20 30 40 50 60 pF1KE1 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. NP_056 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE 10 20 30 40 50 70 80 90 100 110 pF1KE1 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. NP_056 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL 60 70 80 90 100 110 120 130 pF1KE1 VAKKAVDAEPVLKAHQSHSA--------------------------------------EI .:.: : ..: ...:: :. NP_056 MASKKDDPGIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNEL 120 130 140 150 160 170 140 150 160 170 180 190 pF1KE1 ESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELENKELRELLSISSES-LQARKEN ....:.: ::. :::::...:..: :: ::.. ::: ::: :::.:.:. :: :. ::.. NP_056 QAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREILQITRESFLNLRKDD 180 190 200 210 220 230 200 pF1KE1 SMDTASQAIK . NP_056 ASESTSLSALVTNSDLSLRKS 240 250 207 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:59:33 2016 done: Sun Nov 6 18:59:34 2016 Total Scan time: 6.320 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]