FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6282, 256 aa 1>>>pF1KE6282 256 - 256 aa - 256 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4051+/-0.000874; mu= 9.6718+/- 0.053 mean_var=85.7594+/-17.369, 0's: 0 Z-trim(107.7): 7 B-trim: 3 in 1/51 Lambda= 0.138495 statistics sampled from 9739 (9741) to 9739 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.299), width: 16 Scan time: 2.000 The best scores are: opt bits E(32554) CCDS836.1 ATP5F1 gene_id:515|Hs108|chr1 ( 256) 1643 337.8 4.3e-93 >>CCDS836.1 ATP5F1 gene_id:515|Hs108|chr1 (256 aa) initn: 1643 init1: 1643 opt: 1643 Z-score: 1784.8 bits: 337.8 E(32554): 4.3e-93 Smith-Waterman score: 1643; 100.0% identity (100.0% similar) in 256 aa overlap (1-256:1-256) 10 20 30 40 50 60 pF1KE6 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MLSRVVLSAAATAAPSLKNAAFLGPGVLQATRTFHTGQPHLVPVPPLPEYGGKVRYGLIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 EEFFQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 ADFADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 TYRERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCI 190 200 210 220 230 240 250 pF1KE6 ADLKLLAKKAQAQPVM :::::::::::::::: CCDS83 ADLKLLAKKAQAQPVM 250 256 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:45:18 2016 done: Tue Nov 8 11:45:19 2016 Total Scan time: 2.000 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]