FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8821, 384 aa 1>>>pF1KB8821 384 - 384 aa - 384 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6514+/-0.000282; mu= 18.3841+/- 0.018 mean_var=123.0853+/-26.872, 0's: 0 Z-trim(121.8): 40 B-trim: 4239 in 2/53 Lambda= 0.115604 statistics sampled from 38789 (38858) to 38789 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.456), width: 16 Scan time: 10.130 The best scores are: opt bits E(85289) NP_071332 (OMIM: 607468,616939) probable G-protein ( 384) 2560 437.4 2.6e-122 XP_016877087 (OMIM: 607970) PREDICTED: probable G- ( 494) 218 46.9 0.00012 XP_016877086 (OMIM: 607970) PREDICTED: probable G- ( 494) 218 46.9 0.00012 XP_016877088 (OMIM: 607970) PREDICTED: probable G- ( 494) 218 46.9 0.00012 NP_072093 (OMIM: 607970) probable G-protein couple ( 494) 218 46.9 0.00012 XP_016877085 (OMIM: 607970) PREDICTED: probable G- ( 494) 218 46.9 0.00012 NP_000016 (OMIM: 109691,601665) beta-3 adrenergic ( 408) 191 42.3 0.0024 NP_062874 (OMIM: 182137) 5-hydroxytryptamine recep ( 432) 189 42.0 0.0031 NP_000863 (OMIM: 182137) 5-hydroxytryptamine recep ( 445) 189 42.1 0.0032 NP_062873 (OMIM: 182137) 5-hydroxytryptamine recep ( 479) 189 42.1 0.0033 >>NP_071332 (OMIM: 607468,616939) probable G-protein cou (384 aa) initn: 2560 init1: 2560 opt: 2560 Z-score: 2316.7 bits: 437.4 E(85289): 2.6e-122 Smith-Waterman score: 2560; 99.7% identity (100.0% similar) in 384 aa overlap (1-384:1-384) 10 20 30 40 50 60 pF1KB8 MTNSSSTSTSSTTGGSLLLLCEEEESWAGRRIPVSLLYSGLAIGGTLANGMVIYLVSSFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 MTNSSSTSTSSTTGGSLLLLCEEEESWAGRRIPVSLLYSGLAIGGTLANGMVIYLVSSFR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 KLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGAGGSYRLLRGGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 KLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGAGGSYRLLRGGLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 GLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 GLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPWA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 PRPGAAPPRIHYPALLAAAALLAQTALLLHCYLGIVRRVRVSVKRVSVLNFHLLHQLPGC :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 PRPGAAPPRVHYPALLAAAALLAQTALLLHCYLGIVRRVRVSVKRVSVLNFHLLHQLPGC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 AAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLLLCCVFLLATQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 AAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLLLCCVFLLATQPL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 VWVSLASGFSLPVPWGVQAASWLLCCALSALNPLLYTWRNEEFRRSVRSVLPGVGDAAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 VWVSLASGFSLPVPWGVQAASWLLCCALSALNPLLYTWRNEEFRRSVRSVLPGVGDAAAA 310 320 330 340 350 360 370 380 pF1KB8 AVAATAVPAVSQAQLGTRAAGQHW :::::::::::::::::::::::: NP_071 AVAATAVPAVSQAQLGTRAAGQHW 370 380 >>XP_016877087 (OMIM: 607970) PREDICTED: probable G-prot (494 aa) initn: 161 init1: 72 opt: 218 Z-score: 204.5 bits: 46.9 E(85289): 0.00012 Smith-Waterman score: 227; 30.5% identity (52.6% similar) in 272 aa overlap (1-230:55-315) 10 20 pF1KB8 MTNSSSTSTSSTTGGSLLLLC-EEEESWAG ....:. .:... ::. : .:. :. XP_016 SAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAA 30 40 50 60 70 80 30 40 50 60 70 pF1KB8 RRIPVS-----LLYSGLAIGGTLANGMVIYLVSSF------------RKLQTTSNAFIVN : :.. :: : :... ..:.:.::. :.:.:..::::.. XP_016 VRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLGNCAVMGVIVKHRQLRTVTNAFILS 90 100 110 120 130 140 80 90 100 110 120 pF1KB8 GCAADLSVCALWMPQEAVLGLL-PTGSAEPPA---DWDGAGGSYRLLRGGLLGLGLTVSL .:: . : .: : : :. : :.. : : : : .. :.. .. .:. :: XP_016 LSLSDLLTALLCLPA-AFLDLFTPPGGSAPAAAAGPWRGFCAASRFF-SSCFGI---VST 150 160 170 180 190 130 140 150 160 170 180 pF1KB8 LSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPW----APRPG :: :..:.:: :.: : . ::.. .:: .: :::. : :: ::: XP_016 LSVALISLDRYCAIVRPP---REKIGRRRALQLLAGAWLTALGFSL---PWELLGAPREL 200 210 220 230 240 250 190 200 210 220 pF1KB8 AAPPRIH---Y-----PALLAAA--------ALLAQTALLLHCYLGIVRRVRVSVKRVSV :: .: : :: :.:: : :. :. : . ::.: :: XP_016 AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRP 260 270 280 290 300 310 230 240 250 260 270 280 pF1KB8 LNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLL .: XP_016 VNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAV 320 330 340 350 360 370 >>XP_016877086 (OMIM: 607970) PREDICTED: probable G-prot (494 aa) initn: 161 init1: 72 opt: 218 Z-score: 204.5 bits: 46.9 E(85289): 0.00012 Smith-Waterman score: 227; 30.5% identity (52.6% similar) in 272 aa overlap (1-230:55-315) 10 20 pF1KB8 MTNSSSTSTSSTTGGSLLLLC-EEEESWAG ....:. .:... ::. : .:. :. XP_016 SAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAA 30 40 50 60 70 80 30 40 50 60 70 pF1KB8 RRIPVS-----LLYSGLAIGGTLANGMVIYLVSSF------------RKLQTTSNAFIVN : :.. :: : :... ..:.:.::. :.:.:..::::.. XP_016 VRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLGNCAVMGVIVKHRQLRTVTNAFILS 90 100 110 120 130 140 80 90 100 110 120 pF1KB8 GCAADLSVCALWMPQEAVLGLL-PTGSAEPPA---DWDGAGGSYRLLRGGLLGLGLTVSL .:: . : .: : : :. : :.. : : : : .. :.. .. .:. :: XP_016 LSLSDLLTALLCLPA-AFLDLFTPPGGSAPAAAAGPWRGFCAASRFF-SSCFGI---VST 150 160 170 180 190 130 140 150 160 170 180 pF1KB8 LSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPW----APRPG :: :..:.:: :.: : . ::.. .:: .: :::. : :: ::: XP_016 LSVALISLDRYCAIVRPP---REKIGRRRALQLLAGAWLTALGFSL---PWELLGAPREL 200 210 220 230 240 250 190 200 210 220 pF1KB8 AAPPRIH---Y-----PALLAAA--------ALLAQTALLLHCYLGIVRRVRVSVKRVSV :: .: : :: :.:: : :. :. : . ::.: :: XP_016 AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRP 260 270 280 290 300 310 230 240 250 260 270 280 pF1KB8 LNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLL .: XP_016 VNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAV 320 330 340 350 360 370 >>XP_016877088 (OMIM: 607970) PREDICTED: probable G-prot (494 aa) initn: 161 init1: 72 opt: 218 Z-score: 204.5 bits: 46.9 E(85289): 0.00012 Smith-Waterman score: 227; 30.5% identity (52.6% similar) in 272 aa overlap (1-230:55-315) 10 20 pF1KB8 MTNSSSTSTSSTTGGSLLLLC-EEEESWAG ....:. .:... ::. : .:. :. XP_016 SAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAA 30 40 50 60 70 80 30 40 50 60 70 pF1KB8 RRIPVS-----LLYSGLAIGGTLANGMVIYLVSSF------------RKLQTTSNAFIVN : :.. :: : :... ..:.:.::. :.:.:..::::.. XP_016 VRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLGNCAVMGVIVKHRQLRTVTNAFILS 90 100 110 120 130 140 80 90 100 110 120 pF1KB8 GCAADLSVCALWMPQEAVLGLL-PTGSAEPPA---DWDGAGGSYRLLRGGLLGLGLTVSL .:: . : .: : : :. : :.. : : : : .. :.. .. .:. :: XP_016 LSLSDLLTALLCLPA-AFLDLFTPPGGSAPAAAAGPWRGFCAASRFF-SSCFGI---VST 150 160 170 180 190 130 140 150 160 170 180 pF1KB8 LSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPW----APRPG :: :..:.:: :.: : . ::.. .:: .: :::. : :: ::: XP_016 LSVALISLDRYCAIVRPP---REKIGRRRALQLLAGAWLTALGFSL---PWELLGAPREL 200 210 220 230 240 250 190 200 210 220 pF1KB8 AAPPRIH---Y-----PALLAAA--------ALLAQTALLLHCYLGIVRRVRVSVKRVSV :: .: : :: :.:: : :. :. : . ::.: :: XP_016 AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRP 260 270 280 290 300 310 230 240 250 260 270 280 pF1KB8 LNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLL .: XP_016 VNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAV 320 330 340 350 360 370 >>NP_072093 (OMIM: 607970) probable G-protein coupled re (494 aa) initn: 161 init1: 72 opt: 218 Z-score: 204.5 bits: 46.9 E(85289): 0.00012 Smith-Waterman score: 227; 30.5% identity (52.6% similar) in 272 aa overlap (1-230:55-315) 10 20 pF1KB8 MTNSSSTSTSSTTGGSLLLLC-EEEESWAG ....:. .:... ::. : .:. :. NP_072 SAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAA 30 40 50 60 70 80 30 40 50 60 70 pF1KB8 RRIPVS-----LLYSGLAIGGTLANGMVIYLVSSF------------RKLQTTSNAFIVN : :.. :: : :... ..:.:.::. :.:.:..::::.. NP_072 VRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLGNCAVMGVIVKHRQLRTVTNAFILS 90 100 110 120 130 140 80 90 100 110 120 pF1KB8 GCAADLSVCALWMPQEAVLGLL-PTGSAEPPA---DWDGAGGSYRLLRGGLLGLGLTVSL .:: . : .: : : :. : :.. : : : : .. :.. .. .:. :: NP_072 LSLSDLLTALLCLPA-AFLDLFTPPGGSAPAAAAGPWRGFCAASRFF-SSCFGI---VST 150 160 170 180 190 130 140 150 160 170 180 pF1KB8 LSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPW----APRPG :: :..:.:: :.: : . ::.. .:: .: :::. : :: ::: NP_072 LSVALISLDRYCAIVRPP---REKIGRRRALQLLAGAWLTALGFSL---PWELLGAPREL 200 210 220 230 240 250 190 200 210 220 pF1KB8 AAPPRIH---Y-----PALLAAA--------ALLAQTALLLHCYLGIVRRVRVSVKRVSV :: .: : :: :.:: : :. :. : . ::.: :: NP_072 AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRP 260 270 280 290 300 310 230 240 250 260 270 280 pF1KB8 LNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLL .: NP_072 VNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAV 320 330 340 350 360 370 >>XP_016877085 (OMIM: 607970) PREDICTED: probable G-prot (494 aa) initn: 161 init1: 72 opt: 218 Z-score: 204.5 bits: 46.9 E(85289): 0.00012 Smith-Waterman score: 227; 30.5% identity (52.6% similar) in 272 aa overlap (1-230:55-315) 10 20 pF1KB8 MTNSSSTSTSSTTGGSLLLLC-EEEESWAG ....:. .:... ::. : .:. :. XP_016 SAAGPPGGTSSAATAAVLSFSTVATAALGNLSDASGGGTAAAPGGGGLGGSGAAREAGAA 30 40 50 60 70 80 30 40 50 60 70 pF1KB8 RRIPVS-----LLYSGLAIGGTLANGMVIYLVSSF------------RKLQTTSNAFIVN : :.. :: : :... ..:.:.::. :.:.:..::::.. XP_016 VRRPLGPEAAPLLSHGAAVAAQALVLLLIFLLSSLGNCAVMGVIVKHRQLRTVTNAFILS 90 100 110 120 130 140 80 90 100 110 120 pF1KB8 GCAADLSVCALWMPQEAVLGLL-PTGSAEPPA---DWDGAGGSYRLLRGGLLGLGLTVSL .:: . : .: : : :. : :.. : : : : .. :.. .. .:. :: XP_016 LSLSDLLTALLCLPA-AFLDLFTPPGGSAPAAAAGPWRGFCAASRFF-SSCFGI---VST 150 160 170 180 190 130 140 150 160 170 180 pF1KB8 LSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPW----APRPG :: :..:.:: :.: : . ::.. .:: .: :::. : :: ::: XP_016 LSVALISLDRYCAIVRPP---REKIGRRRALQLLAGAWLTALGFSL---PWELLGAPREL 200 210 220 230 240 250 190 200 210 220 pF1KB8 AAPPRIH---Y-----PALLAAA--------ALLAQTALLLHCYLGIVRRVRVSVKRVSV :: .: : :: :.:: : :. :. : . ::.: :: XP_016 AAAQSFHGCLYRTSPDPAQLGAAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRP 260 270 280 290 300 310 230 240 250 260 270 280 pF1KB8 LNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLL .: XP_016 VNTYARVLRFFSEVRTATTVLIMIVFVICCWGPYCFLVLLAAARQAQTMQAPSLLSVVAV 320 330 340 350 360 370 >>NP_000016 (OMIM: 109691,601665) beta-3 adrenergic rece (408 aa) initn: 151 init1: 88 opt: 191 Z-score: 181.1 bits: 42.3 E(85289): 0.0024 Smith-Waterman score: 295; 30.1% identity (51.8% similar) in 396 aa overlap (24-384:36-405) 10 20 30 40 50 pF1KB8 MTNSSSTSTSSTTGGSLLLLCEEEESWAGRRIPVSLLYSGLAIGGTLANGMVI : . :: . ...: . .::.: .:: NP_000 HENSSLAPWPDLPTLAPNTANTSGLPGVPWEAALAGALLALAVLAT---VGGNL---LVI 10 20 30 40 50 60 70 80 90 100 110 pF1KB8 YLVSSFRKLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWD-GAGGSY .. .::: .:.:... :::: . : .: :.:.: :: : :: : NP_000 VAIAWTPRLQTMTNVFVTSLAAADLVMGLLVVPPAATLAL--TGH------WPLGATGCE 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 RLLRGGLLGLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWAL--AL : .. : .:.:. . : .:..::: .: : : :: .: . ..: :.. :. NP_000 --LWTSVDVLCVTASIETLCALAVDRYLAVTN-PLRYGALVTKRCARTAVVLVWVVSAAV 120 130 140 150 160 180 190 200 210 pF1KB8 GLVLLLPPWAPRPGA--APPRIHY-PALLAAAA-----LLAQTA---LLLHCYLGIVRRV ... .. : : :: : : : : :. ::.... : : .: . :: NP_000 SFAPIMSQWW-RVGADAEAQRCHSNPRCCAFASNMPYVLLSSSVSFYLPLLVMLFVYARV 170 180 190 200 210 220 220 230 240 250 260 270 pF1KB8 RVSVKRVSVLNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPL----PPALHPR : . : : : ..: . : :. . ::.: :. : .. : : : : NP_000 FVVATRQLRLLRGELGRFPPEESPPA--PSRSLAPAPVGTCAPPEGVPACGRRPARLLPL 230 240 250 260 270 280 280 290 300 310 320 330 pF1KB8 RAQRRLSGLSVLL----LCCV-FLLATQPLVWVSLASGFSLPVPWGVQAASWLLCCALSA : .: : :.... :: . :.::. : .:.. .: : . : .:: : :: NP_000 REHRALCTLGLIMGTFTLCWLPFFLAN---VLRALGGPSLVPGP-AFLALNWL-GYANSA 290 300 310 320 330 340 340 350 360 370 pF1KB8 LNPLLYTWRNEEFRRSVRSVL--------PGVGDAAAAAVAATAVPAV----SQAQLGTR .:::.: :. .:: . : .: : :: :. ..:::. .: .: : NP_000 FNPLIYC-RSPDFRSAFRRLLCRCGRRLPPEPCAAARPALFPSGVPAARSSPAQPRLCQR 350 360 370 380 390 380 pF1KB8 AAGQHW : : NP_000 LDGASWGVS 400 >>NP_062874 (OMIM: 182137) 5-hydroxytryptamine receptor (432 aa) initn: 123 init1: 70 opt: 189 Z-score: 179.0 bits: 42.0 E(85289): 0.0031 Smith-Waterman score: 190; 23.6% identity (50.3% similar) in 348 aa overlap (21-351:70-399) 10 20 30 40 pF1KB8 MTNSSSTSTSSTTGGSLLLLCEEEESWAGR--RIPVSLLYSGLAIGGTLA : :. .. :: .. .. . . ... . NP_062 VAGSWAPHLLSEVTASPAPTWDAPPDNASGCGEQINY-GRVEKVVIGSILTLITLLTIAG 40 50 60 70 80 90 50 60 70 80 90 100 pF1KB8 NGMVIYLVSSFRKLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGA : .:. : .::. :: .::. ::::: . :: .: :. : . : NP_062 NCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLI--G-----GKWI-F 100 110 120 130 140 150 110 120 130 140 150 160 pF1KB8 GGSYRLLRGGLLGLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWAL : . . .. . :.:... :.....::: ::: : :: . . . : :. : : NP_062 GHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITR-PLTYPVRQNGKCMAKMILSVWLL 160 170 180 190 200 170 180 190 200 210 220 pF1KB8 ALGLVLLLPP---WAP-----RPGAAPPRIHYPALLAAAALLAQTALLLHCYLGIVRRVR . ...: :: :: . . : .:.:. ...: : : . .: NP_062 SASITL--PPLFGWAQNVNDDKVCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAAR 210 220 230 240 250 260 230 240 250 260 270 280 pF1KB8 VSVKRVSVLNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRR :. . . .: .. : . : .. :. . . .: :. NP_062 KSAAKHKFPGFPRVE--PDSVIALNGIVKLQKEVEECANLSRLLKHERKNISIFKREQKA 270 280 290 300 310 320 290 300 310 320 330 pF1KB8 LSGLSVLL---LCC---VFLLAT-QPLVWVSLASGFSLPVPWGVQAASWLLCCALSALNP . :.... : :::.: .:.. .: .:. : .. :: : : .:: NP_062 ATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPL-WVERTFLWL-GYANSLINP 330 340 350 360 370 380 340 350 360 370 380 pF1KB8 LLYTWRNEEFRRSVRSVLPGVGDAAAAAVAATAVPAVSQAQLGTRAAGQHW ..:.. :...: . ::.: NP_062 FIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERPEFVL 390 400 410 420 430 >>NP_000863 (OMIM: 182137) 5-hydroxytryptamine receptor (445 aa) initn: 123 init1: 70 opt: 189 Z-score: 178.9 bits: 42.1 E(85289): 0.0032 Smith-Waterman score: 190; 23.6% identity (50.3% similar) in 348 aa overlap (21-351:70-399) 10 20 30 40 pF1KB8 MTNSSSTSTSSTTGGSLLLLCEEEESWAGR--RIPVSLLYSGLAIGGTLA : :. .. :: .. .. . . ... . NP_000 VAGSWAPHLLSEVTASPAPTWDAPPDNASGCGEQINY-GRVEKVVIGSILTLITLLTIAG 40 50 60 70 80 90 50 60 70 80 90 100 pF1KB8 NGMVIYLVSSFRKLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGA : .:. : .::. :: .::. ::::: . :: .: :. : . : NP_000 NCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLI--G-----GKWI-F 100 110 120 130 140 150 110 120 130 140 150 160 pF1KB8 GGSYRLLRGGLLGLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWAL : . . .. . :.:... :.....::: ::: : :: . . . : :. : : NP_000 GHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITR-PLTYPVRQNGKCMAKMILSVWLL 160 170 180 190 200 170 180 190 200 210 220 pF1KB8 ALGLVLLLPP---WAP-----RPGAAPPRIHYPALLAAAALLAQTALLLHCYLGIVRRVR . ...: :: :: . . : .:.:. ...: : : . .: NP_000 SASITL--PPLFGWAQNVNDDKVCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAAR 210 220 230 240 250 260 230 240 250 260 270 280 pF1KB8 VSVKRVSVLNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRR :. . . .: .. : . : .. :. . . .: :. NP_000 KSAAKHKFPGFPRVE--PDSVIALNGIVKLQKEVEECANLSRLLKHERKNISIFKREQKA 270 280 290 300 310 320 290 300 310 320 330 pF1KB8 LSGLSVLL---LCC---VFLLAT-QPLVWVSLASGFSLPVPWGVQAASWLLCCALSALNP . :.... : :::.: .:.. .: .:. : .. :: : : .:: NP_000 ATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPL-WVERTFLWL-GYANSLINP 330 340 350 360 370 380 340 350 360 370 380 pF1KB8 LLYTWRNEEFRRSVRSVLPGVGDAAAAAVAATAVPAVSQAQLGTRAAGQHW ..:.. :...: . ::.: NP_000 FIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERPEFVLQNADYCRKK 390 400 410 420 430 440 >>NP_062873 (OMIM: 182137) 5-hydroxytryptamine receptor (479 aa) initn: 123 init1: 70 opt: 189 Z-score: 178.5 bits: 42.1 E(85289): 0.0033 Smith-Waterman score: 190; 23.6% identity (50.3% similar) in 348 aa overlap (21-351:70-399) 10 20 30 40 pF1KB8 MTNSSSTSTSSTTGGSLLLLCEEEESWAGR--RIPVSLLYSGLAIGGTLA : :. .. :: .. .. . . ... . NP_062 VAGSWAPHLLSEVTASPAPTWDAPPDNASGCGEQINY-GRVEKVVIGSILTLITLLTIAG 40 50 60 70 80 90 50 60 70 80 90 100 pF1KB8 NGMVIYLVSSFRKLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGA : .:. : .::. :: .::. ::::: . :: .: :. : . : NP_062 NCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLI--G-----GKWI-F 100 110 120 130 140 150 110 120 130 140 150 160 pF1KB8 GGSYRLLRGGLLGLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWAL : . . .. . :.:... :.....::: ::: : :: . . . : :. : : NP_062 GHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITR-PLTYPVRQNGKCMAKMILSVWLL 160 170 180 190 200 170 180 190 200 210 220 pF1KB8 ALGLVLLLPP---WAP-----RPGAAPPRIHYPALLAAAALLAQTALLLHCYLGIVRRVR . ...: :: :: . . : .:.:. ...: : : . .: NP_062 SASITL--PPLFGWAQNVNDDKVCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAAR 210 220 230 240 250 260 230 240 250 260 270 280 pF1KB8 VSVKRVSVLNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRR :. . . .: .. : . : .. :. . . .: :. NP_062 KSAAKHKFPGFPRVE--PDSVIALNGIVKLQKEVEECANLSRLLKHERKNISIFKREQKA 270 280 290 300 310 320 290 300 310 320 330 pF1KB8 LSGLSVLL---LCC---VFLLAT-QPLVWVSLASGFSLPVPWGVQAASWLLCCALSALNP . :.... : :::.: .:.. .: .:. : .. :: : : .:: NP_062 ATTLGIIVGAFTVCWLPFFLLSTARPFI--CGTSCSCIPL-WVERTFLWL-GYANSLINP 330 340 350 360 370 380 340 350 360 370 380 pF1KB8 LLYTWRNEEFRRSVRSVLPGVGDAAAAAVAATAVPAVSQAQLGTRAAGQHW ..:.. :...: . ::.: NP_062 FIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERPEFVLRACTRRVLL 390 400 410 420 430 440 384 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:01:29 2016 done: Sun Nov 6 19:01:31 2016 Total Scan time: 10.130 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]