FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2372, 657 aa 1>>>pF1KE2372 657 - 657 aa - 657 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.6840+/-0.00131; mu= -9.2868+/- 0.077 mean_var=469.9241+/-99.634, 0's: 0 Z-trim(108.9): 98 B-trim: 0 in 0/54 Lambda= 0.059164 statistics sampled from 10485 (10526) to 10485 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.663), E-opt: 0.2 (0.323), width: 16 Scan time: 3.950 The best scores are: opt bits E(32554) CCDS764.1 SASS6 gene_id:163786|Hs108|chr1 ( 657) 4194 373.5 5.2e-103 >>CCDS764.1 SASS6 gene_id:163786|Hs108|chr1 (657 aa) initn: 4194 init1: 4194 opt: 4194 Z-score: 1962.8 bits: 373.5 E(32554): 5.2e-103 Smith-Waterman score: 4194; 99.8% identity (100.0% similar) in 657 aa overlap (1-657:1-657) 10 20 30 40 50 60 pF1KE2 MSQVLFHQLVPLQVKCKDCEERRVSIRMSIELQSVSNPVHRKDLVIRLTDDTDPFFLYNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MSQVLFHQLVPLQVKCKDCEERRVSIRMSIELQSVSNPVHRKDLVIRLTDDTDPFFLYNL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 VISEEDFQSLKFQQGLLVDFLAFPQKFIDLLQQCTQEHAKEIPRFLLQLVSPAAILDNSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VISEEDFQSLKFQQGLLVDFLAFPQKFIDLLQQCTQEHAKEIPRFLLQLVSPAAILDNSP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 AFLNVVETNPFKHLTHLSLKLLPGNDVEIKKFLAGCLKCSKEEKLSLMQSLDDATKQLDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AFLNVVETNPFKHLTHLSLKLLPGNDVEIKKFLAGCLKCSKEEKLSLMQSLDDATKQLDF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 TRKTLAEKKQELDKLRNEWASHTAALTNKHSQELTNEKEKALQAQVQYQQQHEQQKKDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 TRKTLAEKKQELDKLRNEWASHTAALTNKHSQELTNEKEKALQAQVQYQQQHEQQKKDLE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ILHQQNIHQLQNRLSELEVANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLR ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: CCDS76 ILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 RENSTLDVECHEKEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 KNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 KNQVQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLKLKNTVTIQQEKLLAEKEE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 KLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVKKLEESKQLLKNNEKLITWLNKELNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 KLQKEQKELQDVGQSLRIKEQEVCKLQEQLEATVKKLEESKQLLKNNEKLITWLNKELNE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 NQLVRKQDVLGPSTTPPAHSSSNTIRSGISPNLNVVDGRLTYPTCGIGYPVSSAFAFQNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NQLVRKQDVLGPSTTPPAHSSSNTIRSGISPNLNVVDGRLTYPTCGIGYPVSSAFAFQNT 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 FPHSISAKNTSHPGSGTKVQFNLQFTKPNASLGDVQSGATISMPCSTDKENGENVGLESK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 FPHSISAKNTSHPGSGTKVQFNLQFTKPNASLGDVQSGATISMPCSTDKENGENVGLESK 550 560 570 580 590 600 610 620 630 640 650 pF1KE2 YLKKREDSIPLRGLSQNLFSNSDHQRDGTLGALHTSSKPTALPSASSAYFPGQLPNS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 YLKKREDSIPLRGLSQNLFSNSDHQRDGTLGALHTSSKPTALPSASSAYFPGQLPNS 610 620 630 640 650 657 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:12:16 2016 done: Sun Nov 6 19:12:17 2016 Total Scan time: 3.950 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]