Result of FASTA (omim) for pFN21AE1164
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1164, 593 aa
  1>>>pF1KE1164 593 - 593 aa - 593 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0861+/-0.000429; mu= 11.3490+/- 0.027
 mean_var=156.6941+/-31.629, 0's: 0 Z-trim(116.7): 98  B-trim: 234 in 2/51
 Lambda= 0.102458
 statistics sampled from 27921 (28036) to 27921 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.329), width:  16
 Scan time: 10.750

The best scores are:                                      opt bits E(85289)
NP_031384 (OMIM: 609882) metal-response element-bi ( 593) 4077 615.1  2e-175
XP_011539318 (OMIM: 609882) PREDICTED: metal-respo ( 491) 3392 513.8 5.3e-145
NP_001157863 (OMIM: 609882) metal-response element ( 491) 3392 513.8 5.3e-145
NP_001157865 (OMIM: 609882) metal-response element ( 491) 3392 513.8 5.3e-145
XP_016856165 (OMIM: 609882) PREDICTED: metal-respo ( 491) 3392 513.8 5.3e-145
NP_001157864 (OMIM: 609882) metal-response element ( 536) 2379 364.1 6.7e-100
XP_011539319 (OMIM: 609882) PREDICTED: metal-respo ( 331) 2208 338.6 1.9e-92
XP_011539321 (OMIM: 609882) PREDICTED: metal-respo ( 320) 1870 288.7   2e-77
XP_016856168 (OMIM: 609882) PREDICTED: metal-respo ( 320) 1870 288.7   2e-77
XP_016856166 (OMIM: 609882) PREDICTED: metal-respo ( 434) 1694 262.8 1.7e-69
XP_016856167 (OMIM: 609882) PREDICTED: metal-respo ( 434) 1694 262.8 1.7e-69
XP_011516811 (OMIM: 609740) PREDICTED: PHD finger  ( 580) 1673 259.8 1.8e-68
XP_016870101 (OMIM: 609740) PREDICTED: PHD finger  ( 580) 1673 259.8 1.8e-68
NP_056466 (OMIM: 609740) PHD finger protein 19 iso ( 580) 1673 259.8 1.8e-68
XP_005251963 (OMIM: 609740) PREDICTED: PHD finger  ( 580) 1673 259.8 1.8e-68
NP_001273769 (OMIM: 609740) PHD finger protein 19  ( 599) 1673 259.8 1.9e-68
XP_011516817 (OMIM: 609740) PREDICTED: PHD finger  ( 422) 1390 217.8 5.7e-56
XP_011516813 (OMIM: 609740) PREDICTED: PHD finger  ( 473) 1390 217.9 6.2e-56
XP_011516818 (OMIM: 609740) PREDICTED: PHD finger  ( 388) 1378 216.0 1.8e-55
XP_016870102 (OMIM: 609740) PREDICTED: PHD finger  ( 443) 1378 216.1   2e-55
XP_011512968 (OMIM: 602881) PREDICTED: PHD finger  ( 498) 1359 213.3 1.5e-54
XP_011512967 (OMIM: 602881) PREDICTED: PHD finger  ( 499) 1359 213.3 1.5e-54
XP_011512965 (OMIM: 602881) PREDICTED: PHD finger  ( 566) 1355 212.8 2.6e-54
XP_011512964 (OMIM: 602881) PREDICTED: PHD finger  ( 567) 1355 212.8 2.6e-54
NP_077084 (OMIM: 602881) PHD finger protein 1 isof ( 567) 1355 212.8 2.6e-54
XP_011512971 (OMIM: 602881) PREDICTED: PHD finger  ( 429) 1337 210.0 1.3e-53
NP_002627 (OMIM: 602881) PHD finger protein 1 isof ( 457) 1336 209.9 1.5e-53
XP_011512972 (OMIM: 602881) PREDICTED: PHD finger  ( 415) 1332 209.2 2.2e-53
NP_001273771 (OMIM: 609740) PHD finger protein 19  ( 371)  964 154.8 4.7e-37
XP_011512966 (OMIM: 602881) PREDICTED: PHD finger  ( 535)  719 118.7 4.9e-26
NP_001009936 (OMIM: 609740) PHD finger protein 19  ( 207)  436 76.5 9.6e-14
NP_001273772 (OMIM: 609740) PHD finger protein 19  ( 130)  324 59.8 6.6e-09
XP_006718902 (OMIM: 159555,605130) PREDICTED: hist (3133)  208 43.9  0.0097
XP_011541135 (OMIM: 159555,605130) PREDICTED: hist (3166)  208 43.9  0.0097


>>NP_031384 (OMIM: 609882) metal-response element-bindin  (593 aa)
 initn: 4077 init1: 4077 opt: 4077  Z-score: 3270.4  bits: 615.1 E(85289): 2e-175
Smith-Waterman score: 4077; 100.0% identity (100.0% similar) in 593 aa overlap (1-593:1-593)

               10        20        30        40        50        60
pF1KE1 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 AEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 AEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD
              490       500       510       520       530       540

              550       560       570       580       590   
pF1KE1 QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_031 QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
              550       560       570       580       590   

>>XP_011539318 (OMIM: 609882) PREDICTED: metal-response   (491 aa)
 initn: 3392 init1: 3392 opt: 3392  Z-score: 2724.3  bits: 513.8 E(85289): 5.3e-145
Smith-Waterman score: 3392; 100.0% identity (100.0% similar) in 491 aa overlap (103-593:1-491)

             80        90       100       110       120       130  
pF1KE1 KQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                     ::::::::::::::::::::::::::::::
XP_011                               MVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                             10        20        30

            140       150       160       170       180       190  
pF1KE1 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
               40        50        60        70        80        90

            200       210       220       230       240       250  
pF1KE1 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
              100       110       120       130       140       150

            260       270       280       290       300       310  
pF1KE1 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
              160       170       180       190       200       210

            320       330       340       350       360       370  
pF1KE1 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
              220       230       240       250       260       270

            380       390       400       410       420       430  
pF1KE1 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
              280       290       300       310       320       330

            440       450       460       470       480       490  
pF1KE1 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
              340       350       360       370       380       390

            500       510       520       530       540       550  
pF1KE1 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
              400       410       420       430       440       450

            560       570       580       590   
pF1KE1 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::
XP_011 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
              460       470       480       490 

>>NP_001157863 (OMIM: 609882) metal-response element-bin  (491 aa)
 initn: 3392 init1: 3392 opt: 3392  Z-score: 2724.3  bits: 513.8 E(85289): 5.3e-145
Smith-Waterman score: 3392; 100.0% identity (100.0% similar) in 491 aa overlap (103-593:1-491)

             80        90       100       110       120       130  
pF1KE1 KQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                     ::::::::::::::::::::::::::::::
NP_001                               MVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                             10        20        30

            140       150       160       170       180       190  
pF1KE1 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
               40        50        60        70        80        90

            200       210       220       230       240       250  
pF1KE1 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
              100       110       120       130       140       150

            260       270       280       290       300       310  
pF1KE1 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
              160       170       180       190       200       210

            320       330       340       350       360       370  
pF1KE1 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
              220       230       240       250       260       270

            380       390       400       410       420       430  
pF1KE1 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
              280       290       300       310       320       330

            440       450       460       470       480       490  
pF1KE1 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
              340       350       360       370       380       390

            500       510       520       530       540       550  
pF1KE1 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
              400       410       420       430       440       450

            560       570       580       590   
pF1KE1 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::
NP_001 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
              460       470       480       490 

>>NP_001157865 (OMIM: 609882) metal-response element-bin  (491 aa)
 initn: 3392 init1: 3392 opt: 3392  Z-score: 2724.3  bits: 513.8 E(85289): 5.3e-145
Smith-Waterman score: 3392; 100.0% identity (100.0% similar) in 491 aa overlap (103-593:1-491)

             80        90       100       110       120       130  
pF1KE1 KQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                     ::::::::::::::::::::::::::::::
NP_001                               MVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                             10        20        30

            140       150       160       170       180       190  
pF1KE1 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
               40        50        60        70        80        90

            200       210       220       230       240       250  
pF1KE1 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
              100       110       120       130       140       150

            260       270       280       290       300       310  
pF1KE1 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
              160       170       180       190       200       210

            320       330       340       350       360       370  
pF1KE1 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
              220       230       240       250       260       270

            380       390       400       410       420       430  
pF1KE1 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
              280       290       300       310       320       330

            440       450       460       470       480       490  
pF1KE1 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
              340       350       360       370       380       390

            500       510       520       530       540       550  
pF1KE1 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
              400       410       420       430       440       450

            560       570       580       590   
pF1KE1 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::
NP_001 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
              460       470       480       490 

>>XP_016856165 (OMIM: 609882) PREDICTED: metal-response   (491 aa)
 initn: 3392 init1: 3392 opt: 3392  Z-score: 2724.3  bits: 513.8 E(85289): 5.3e-145
Smith-Waterman score: 3392; 100.0% identity (100.0% similar) in 491 aa overlap (103-593:1-491)

             80        90       100       110       120       130  
pF1KE1 KQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                     ::::::::::::::::::::::::::::::
XP_016                               MVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                             10        20        30

            140       150       160       170       180       190  
pF1KE1 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
               40        50        60        70        80        90

            200       210       220       230       240       250  
pF1KE1 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
              100       110       120       130       140       150

            260       270       280       290       300       310  
pF1KE1 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
              160       170       180       190       200       210

            320       330       340       350       360       370  
pF1KE1 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
              220       230       240       250       260       270

            380       390       400       410       420       430  
pF1KE1 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
              280       290       300       310       320       330

            440       450       460       470       480       490  
pF1KE1 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
              340       350       360       370       380       390

            500       510       520       530       540       550  
pF1KE1 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
              400       410       420       430       440       450

            560       570       580       590   
pF1KE1 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::
XP_016 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
              460       470       480       490 

>>NP_001157864 (OMIM: 609882) metal-response element-bin  (536 aa)
 initn: 2364 init1: 2364 opt: 2379  Z-score: 1914.5  bits: 364.1 E(85289): 6.7e-100
Smith-Waterman score: 3573; 90.4% identity (90.4% similar) in 593 aa overlap (1-593:1-536)

               10        20        30        40        50        60
pF1KE1 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK
       ::::::::::::::::::::::::::::::                              
NP_001 DRLHPGELADTPKSERYEHVLEALNDYKTM------------------------------
              310       320       330                              

              370       380       390       400       410       420
pF1KE1 AEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP
                                  :::::::::::::::::::::::::::::::::
NP_001 ---------------------------EVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEP
                                         340       350       360   

              430       440       450       460       470       480
pF1KE1 LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSR
           370       380       390       400       410       420   

              490       500       510       520       530       540
pF1KE1 KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLAD
           430       440       450       460       470       480   

              550       560       570       580       590   
pF1KE1 QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
           490       500       510       520       530      

>>XP_011539319 (OMIM: 609882) PREDICTED: metal-response   (331 aa)
 initn: 2208 init1: 2208 opt: 2208  Z-score: 1780.7  bits: 338.6 E(85289): 1.9e-92
Smith-Waterman score: 2208; 99.7% identity (100.0% similar) in 308 aa overlap (1-308:1-308)

               10        20        30        40        50        60
pF1KE1 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRDSTGAGNSLVHKRSPLRRNQKTPTSLTKLSLQDGHKAKKPACKFEEGQDVLARWSDGL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FYLGTIKKINILKQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLPYSVADLEWDAGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDRFYTFICSVCSSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 DRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFK
       :::::::.                                                    
XP_011 DRLHPGEFWGQISLVWISGPAFSSSCVFVAC                             
              310       320       330                              

>>XP_011539321 (OMIM: 609882) PREDICTED: metal-response   (320 aa)
 initn: 1870 init1: 1870 opt: 1870  Z-score: 1510.8  bits: 288.7 E(85289): 2e-77
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 286 aa overlap (308-593:35-320)

       280       290       300       310       320       330       
pF1KE1 SVIHKKKYFDSELELMTYINENWDRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEI
                                     ::::::::::::::::::::::::::::::
XP_011 ANAIWRQILYVYMLCLQFWTRIPQTSTITVLADTPKSERYEHVLEALNDYKTMFMSGKEI
           10        20        30        40        50        60    

       340       350       360       370       380       390       
pF1KE1 KKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKG
           70        80        90       100       110       120    

       400       410       420       430       440       450       
pF1KE1 KKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFT
          130       140       150       160       170       180    

       460       470       480       490       500       510       
pF1KE1 GASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVK
          190       200       210       220       230       240    

       520       530       540       550       560       570       
pF1KE1 DDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTL
          250       260       270       280       290       300    

       580       590   
pF1KE1 DGKVQYLVEWEGATAS
       ::::::::::::::::
XP_011 DGKVQYLVEWEGATAS
          310       320

>>XP_016856168 (OMIM: 609882) PREDICTED: metal-response   (320 aa)
 initn: 1870 init1: 1870 opt: 1870  Z-score: 1510.8  bits: 288.7 E(85289): 2e-77
Smith-Waterman score: 1870; 100.0% identity (100.0% similar) in 286 aa overlap (308-593:35-320)

       280       290       300       310       320       330       
pF1KE1 SVIHKKKYFDSELELMTYINENWDRLHPGELADTPKSERYEHVLEALNDYKTMFMSGKEI
                                     ::::::::::::::::::::::::::::::
XP_016 ANAIWRQILYVYMLCLQFWTRIPQTSTITVLADTPKSERYEHVLEALNDYKTMFMSGKEI
           10        20        30        40        50        60    

       340       350       360       370       380       390       
pF1KE1 KKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEFKIKGRKASKPISDSREVSNGIEKKG
           70        80        90       100       110       120    

       400       410       420       430       440       450       
pF1KE1 KKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPTLDLPCSIGRTEGTAHSSNTSDVDFT
          130       140       150       160       170       180    

       460       470       480       490       500       510       
pF1KE1 GASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAAIPHLRRRRGRLPRRALQTQNSEIVK
          190       200       210       220       230       240    

       520       530       540       550       560       570       
pF1KE1 DDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDEGKEDYQFDELNTEILNNLADQELQLNHLKNSITSYFGAAGRIACGEKYRVLARRVTL
          250       260       270       280       290       300    

       580       590   
pF1KE1 DGKVQYLVEWEGATAS
       ::::::::::::::::
XP_016 DGKVQYLVEWEGATAS
          310       320

>>XP_016856166 (OMIM: 609882) PREDICTED: metal-response   (434 aa)
 initn: 1679 init1: 1679 opt: 1694  Z-score: 1368.5  bits: 262.8 E(85289): 1.7e-69
Smith-Waterman score: 2888; 88.4% identity (88.4% similar) in 491 aa overlap (103-593:1-434)

             80        90       100       110       120       130  
pF1KE1 KQSCFIIFEDSSKSWVLWKDIQTGATGSGEMVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                     ::::::::::::::::::::::::::::::
XP_016                               MVCTICQEEYSEAPNEMVICDKCGQGYHQL
                                             10        20        30

            140       150       160       170       180       190  
pF1KE1 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CHTPHIDSSVIDSDEKWLCRQCVFATTTKRGGALKKGPNAKALQVMKQTLPYSVADLEWD
               40        50        60        70        80        90

            200       210       220       230       240       250  
pF1KE1 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGHKTNVQQCYCYCGGPGDWYLKMLQCCKCKQWFHEACVQCLQKPMLFGDRFYTFICSVC
              100       110       120       130       140       150

            260       270       280       290       300       310  
pF1KE1 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGPEYLKRLPLQWVDIAHLCLYNLSVIHKKKYFDSELELMTYINENWDRLHPGELADTP
              160       170       180       190       200       210

            320       330       340       350       360       370  
pF1KE1 KSERYEHVLEALNDYKTMFMSGKEIKKKKHLFGLRIRVPPVPPNVAFKAEKEPEGTSHEF
       ::::::::::::::::::                                          
XP_016 KSERYEHVLEALNDYKTM------------------------------------------
              220                                                  

            380       390       400       410       420       430  
pF1KE1 KIKGRKASKPISDSREVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
                      :::::::::::::::::::::::::::::::::::::::::::::
XP_016 ---------------EVSNGIEKKGKKKSVGRPPGPYTRKMIQKTAEPLLDKESISENPT
                     230       240       250       260       270   

            440       450       460       470       480       490  
pF1KE1 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LDLPCSIGRTEGTAHSSNTSDVDFTGASSAKETTSSSISRHYGLSDSRKRTRTGRSWPAA
           280       290       300       310       320       330   

            500       510       520       530       540       550  
pF1KE1 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPHLRRRRGRLPRRALQTQNSEIVKDDEGKEDYQFDELNTEILNNLADQELQLNHLKNSI
           340       350       360       370       380       390   

            560       570       580       590   
pF1KE1 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
       :::::::::::::::::::::::::::::::::::::::::
XP_016 TSYFGAAGRIACGEKYRVLARRVTLDGKVQYLVEWEGATAS
           400       410       420       430    




593 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 19:12:57 2016 done: Sun Nov  6 19:12:58 2016
 Total Scan time: 10.750 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com