FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2537, 285 aa 1>>>pF1KE2537 285 - 285 aa - 285 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7034+/-0.000814; mu= 12.8227+/- 0.049 mean_var=63.7994+/-12.561, 0's: 0 Z-trim(106.4): 11 B-trim: 0 in 0/49 Lambda= 0.160571 statistics sampled from 8971 (8975) to 8971 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.276), width: 16 Scan time: 1.980 The best scores are: opt bits E(32554) CCDS705.1 DDAH1 gene_id:23576|Hs108|chr1 ( 285) 1853 437.8 4.2e-123 CCDS81348.1 DDAH1 gene_id:23576|Hs108|chr1 ( 185) 1195 285.3 2.2e-77 CCDS44170.1 DDAH1 gene_id:23576|Hs108|chr1 ( 182) 1182 282.3 1.7e-76 CCDS4718.1 DDAH2 gene_id:23564|Hs108|chr6 ( 285) 899 216.8 1.4e-56 >>CCDS705.1 DDAH1 gene_id:23576|Hs108|chr1 (285 aa) initn: 1853 init1: 1853 opt: 1853 Z-score: 2323.5 bits: 437.8 E(32554): 4.2e-123 Smith-Waterman score: 1853; 100.0% identity (100.0% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 pF1KE2 MAGLGHPAAFGRATHAVVRALPESLGQHALRSAKGEEVDVARAERQHQLYVGVLGSKLGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MAGLGHPAAFGRATHAVVRALPESLGQHALRSAKGEEVDVARAERQHQLYVGVLGSKLGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 QVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 DENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 DENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 AGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPE 190 200 210 220 230 240 250 260 270 280 pF1KE2 EYPESAKVYEKLKDHMLIPVSMSELEKVDGLLTCCSVLINKKVDS ::::::::::::::::::::::::::::::::::::::::::::: CCDS70 EYPESAKVYEKLKDHMLIPVSMSELEKVDGLLTCCSVLINKKVDS 250 260 270 280 >>CCDS81348.1 DDAH1 gene_id:23576|Hs108|chr1 (185 aa) initn: 1195 init1: 1195 opt: 1195 Z-score: 1502.8 bits: 285.3 E(32554): 2.2e-77 Smith-Waterman score: 1195; 100.0% identity (100.0% similar) in 184 aa overlap (102-285:2-185) 80 90 100 110 120 130 pF1KE2 PDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDV :::::::::::::::::::::::::::::: CCDS81 MVDMMKEALEKLQLNIVEMKDENATLDGGDV 10 20 30 140 150 160 170 180 190 pF1KE2 LFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSMAGPNLIAIGSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSMAGPNLIAIGSS 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE2 ESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEK 100 110 120 130 140 150 260 270 280 pF1KE2 LKDHMLIPVSMSELEKVDGLLTCCSVLINKKVDS :::::::::::::::::::::::::::::::::: CCDS81 LKDHMLIPVSMSELEKVDGLLTCCSVLINKKVDS 160 170 180 >>CCDS44170.1 DDAH1 gene_id:23576|Hs108|chr1 (182 aa) initn: 1182 init1: 1182 opt: 1182 Z-score: 1486.7 bits: 282.3 E(32554): 1.7e-76 Smith-Waterman score: 1182; 100.0% identity (100.0% similar) in 182 aa overlap (104-285:1-182) 80 90 100 110 120 130 pF1KE2 CVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLF :::::::::::::::::::::::::::::: CCDS44 MMKEALEKLQLNIVEMKDENATLDGGDVLF 10 20 30 140 150 160 170 180 190 pF1KE2 TGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSMAGPNLIAIGSSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSMAGPNLIAIGSSES 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE2 AQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEKLK 100 110 120 130 140 150 260 270 280 pF1KE2 DHMLIPVSMSELEKVDGLLTCCSVLINKKVDS :::::::::::::::::::::::::::::::: CCDS44 DHMLIPVSMSELEKVDGLLTCCSVLINKKVDS 160 170 180 >>CCDS4718.1 DDAH2 gene_id:23564|Hs108|chr6 (285 aa) initn: 915 init1: 778 opt: 899 Z-score: 1129.1 bits: 216.8 E(32554): 1.4e-56 Smith-Waterman score: 899; 52.0% identity (77.1% similar) in 279 aa overlap (4-278:1-279) 10 20 30 40 50 pF1KE2 MAGLGHPA-AFGRATHAVVRALPESLGQHALRSAKGEEVDVARAERQHQLYVGVLGSKLG .: :. ..:: .::..:..::::.. .: .:.:.:.:.: . : : ..:: CCDS47 MGTPGEGLGRCSHALIRGVPESLASGEGAGAGLPALDLAKAQREHGVLGGKLRQRLG 10 20 30 40 50 60 70 80 90 100 110 pF1KE2 LQVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEM ::..::: .:::: .. :.::. .::::::: .:.:: ::: ...::. : : :::. CCDS47 LQLLELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEVDGVRKALQDLGLRIVEI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 KDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCS :::::::: ::::::::::::::: ::.:::::.::::.:.:::::::. ::...:. CCDS47 GDENATLDGTDVLFTGREFFVGLSKWTNHRGAEIVADTFRDFAVSTVPVSGPSHLRGLCG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 MAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYL--NIPNKGHVLLHR :.:: .. :::..::::.. : ..:: : .::.::: ::.:..: ..:. :::: CCDS47 MGGPRTVVAGSSDAAQKAVRAMAVLTDHPYASLTLPDDAAADCLFLRPGLPGVPPFLLHR 180 190 200 210 220 230 240 250 260 270 280 pF1KE2 TPEEYPESAKVYEKLKDHMLIPVSMSELEKVD-GLLTCCSVLINKKVDS . :.: .. .::.: :.::: :::::. :: . : :: CCDS47 GGGDLPNSQEALQKLSDVTLVPVSCSELEKAGAGLSSLCLVLSTRPHS 240 250 260 270 280 285 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 03:36:28 2016 done: Tue Nov 8 03:36:28 2016 Total Scan time: 1.980 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]