FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3881, 452 aa 1>>>pF1KE3881 452 - 452 aa - 452 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8313+/-0.00117; mu= 14.7671+/- 0.070 mean_var=70.6604+/-14.008, 0's: 0 Z-trim(101.6): 21 B-trim: 159 in 1/51 Lambda= 0.152576 statistics sampled from 6678 (6680) to 6678 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.552), E-opt: 0.2 (0.2), width: 16 Scan time: 1.290 The best scores are: opt bits E(33420) CCDS687.2 IFI44L gene_id:10964|Hs109|chr1 ( 452) 2978 665.2 3.8e-191 CCDS688.1 IFI44 gene_id:10561|Hs109|chr1 ( 444) 1057 242.4 7.4e-64 >>CCDS687.2 IFI44L gene_id:10964|Hs109|chr1 (452 aa) initn: 2978 init1: 2978 opt: 2978 Z-score: 3545.3 bits: 665.2 E(33420): 3.8e-191 Smith-Waterman score: 2978; 100.0% identity (100.0% similar) in 452 aa overlap (1-452:1-452) 10 20 30 40 50 60 pF1KE3 MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSKTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSKTD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 IFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKAREHRNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 IFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKAREHRNR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 LLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 RYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 RYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPIT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVALLTKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 PEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVALLTKV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 DDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDILILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS68 DDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDILILS 370 380 390 400 410 420 430 440 450 pF1KE3 ALRQMLRAADDFLEDLPLEETGAIERALQPCI :::::::::::::::::::::::::::::::: CCDS68 ALRQMLRAADDFLEDLPLEETGAIERALQPCI 430 440 450 >>CCDS688.1 IFI44 gene_id:10561|Hs109|chr1 (444 aa) initn: 1167 init1: 583 opt: 1057 Z-score: 1260.1 bits: 242.4 E(33420): 7.4e-64 Smith-Waterman score: 1201; 45.1% identity (72.1% similar) in 455 aa overlap (1-451:1-439) 10 20 30 40 50 60 pF1KE3 MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM : ::::::: :. :.. .:. ::::::.:::: ...:: :: :.:. : . .. CCDS68 MAVTTRLTWLHEKILQNHFGGKRLSLLYKGSVHGFRNGVLLDRCCNQGPTLTVIYSEDHI 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSK-- : :. .: . . .: . :.:: :: : : .:. . . : ..: CCDS68 IGAYAEESYQEGKYASI-----ILFALQ---DTKISEWKLGLCTPETL---FCCDVTKYN 70 80 90 100 120 130 140 150 160 170 pF1KE3 --TDIFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKARE :.. : :. :. .: .:: : . . :::: : :.::. ..: . : CCDS68 SPTNFQIDGRNRKVIMDLKTMENLGLAQNCTISIQDYEVFRCE---DSLDE-RKIKGVIE 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 HRNRLLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDIT :. ::. .: :.::..::..:::::.::.:.:::::::::.:.:.:::: ::.::.. : CCDS68 LRKSLLSALRTYEPYGSLVQQIRILLLGPIGAGKSSFFNSVRSVFQGHVTHQALVGTNTT 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE3 SITERYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSR .:.:.:: ::..:::.:: :::.:::..::. :: ::: ::: .::.: . :::::: CCDS68 GISEKYRTYSIRDGKDGKYLPFILCDSLGLSEKEG-GLCRDDIFYILNGNIRDRYQFNPM 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE3 KPITPEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVAL . : .: .: ::::::::::::.:.: .::. . :.:..:.:....:..: :...::: CCDS68 ESIKLNHHDYIDSPSLKDRIHCVAFVFDASSIQYFSSQMIVKIKRIRRELVNAGVVHVAL 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE3 LTKVDDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDI ::.::. . . . ..... : .:.. .:.. ::. .:.: .:.::.:. ::::.::. CCDS68 LTHVDSMDLITKGDLIEIERCEPVRSKLEEVQRKLGFALSDISVVSNYSSEWELDPVKDV 350 360 370 380 390 400 420 430 440 450 pF1KE3 LILSALRQMLRAADDFLEDLPLEETGAIERALQPCI :::::::.:: ::::::::::.:. : ... . : CCDS68 LILSALRRMLWAADDFLEDLPFEQIGNLREEIINCAQGKK 410 420 430 440 452 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Aug 4 20:37:46 2021 done: Wed Aug 4 20:37:46 2021 Total Scan time: 1.290 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]