FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3249, 551 aa 1>>>pF1KE3249 551 - 551 aa - 551 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6556+/-0.00103; mu= 16.4618+/- 0.061 mean_var=61.7689+/-12.547, 0's: 0 Z-trim(104.2): 32 B-trim: 298 in 2/48 Lambda= 0.163188 statistics sampled from 7790 (7803) to 7790 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.24), width: 16 Scan time: 3.330 The best scores are: opt bits E(32554) CCDS611.2 FGGY gene_id:55277|Hs108|chr1 ( 551) 3726 886.0 0 CCDS44155.1 FGGY gene_id:55277|Hs108|chr1 ( 575) 2818 672.3 4.3e-193 CCDS58003.1 FGGY gene_id:55277|Hs108|chr1 ( 463) 2677 639.1 3.5e-183 CCDS60155.1 FGGY gene_id:55277|Hs108|chr1 ( 252) 1667 401.2 7.6e-112 >>CCDS611.2 FGGY gene_id:55277|Hs108|chr1 (551 aa) initn: 3726 init1: 3726 opt: 3726 Z-score: 4735.6 bits: 886.0 E(32554): 0 Smith-Waterman score: 3726; 99.8% identity (100.0% similar) in 551 aa overlap (1-551:1-551) 10 20 30 40 50 60 pF1KE3 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKKWEPQFNHHEQSSEDIWA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: CCDS61 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH 490 500 510 520 530 540 550 pF1KE3 QKEYLAIMNDD ::::::::::: CCDS61 QKEYLAIMNDD 550 >>CCDS44155.1 FGGY gene_id:55277|Hs108|chr1 (575 aa) initn: 2818 init1: 2818 opt: 2818 Z-score: 3580.0 bits: 672.3 E(32554): 4.3e-193 Smith-Waterman score: 3668; 95.7% identity (95.8% similar) in 575 aa overlap (1-551:1-575) 10 20 30 40 50 60 pF1KE3 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKKWEPQFNHHEQSSEDIWA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: CCDS44 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ 310 320 330 340 350 360 370 380 390 400 pF1KE3 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGM------------- ::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMRTTGYLYIPALAA 370 380 390 400 410 420 410 420 430 440 450 pF1KE3 -----------VTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCG ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LHSPSSLLSPQVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCG 430 440 450 460 470 480 460 470 480 490 500 510 pF1KE3 GLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKV 490 500 510 520 530 540 520 530 540 550 pF1KE3 VFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD ::::::::::::::::::::::::::::::::::: CCDS44 VFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD 550 560 570 >>CCDS58003.1 FGGY gene_id:55277|Hs108|chr1 (463 aa) initn: 2676 init1: 2676 opt: 2677 Z-score: 3402.2 bits: 639.1 E(32554): 3.5e-183 Smith-Waterman score: 2948; 83.8% identity (84.0% similar) in 551 aa overlap (1-551:1-463) 10 20 30 40 50 60 pF1KE3 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKKWEPQFNHHEQSSEDIWA ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: CCDS58 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV ::::::: CCDS58 ACCVVTK----------------------------------------------------- 130 140 150 160 170 180 pF1KE3 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT ::::::::::::::::::::::::: CCDS58 -----------------------------------NLREICWDKAGHFFDLPDFLSWKAT 70 80 90 190 200 210 220 230 240 pF1KE3 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE3 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE3 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE3 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE3 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ 340 350 360 370 380 390 490 500 510 520 530 540 pF1KE3 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH 400 410 420 430 440 450 550 pF1KE3 QKEYLAIMNDD ::::::::::: CCDS58 QKEYLAIMNDD 460 >>CCDS60155.1 FGGY gene_id:55277|Hs108|chr1 (252 aa) initn: 1667 init1: 1667 opt: 1667 Z-score: 2121.5 bits: 401.2 E(32554): 7.6e-112 Smith-Waterman score: 1667; 100.0% identity (100.0% similar) in 252 aa overlap (300-551:1-252) 270 280 290 300 310 320 pF1KE3 GADVRGHGLICEGQPVTSRLAVICGTSSCHMGISKDPIFVPGVWGPYFSAMVPGFWLNEG :::::::::::::::::::::::::::::: CCDS60 MGISKDPIFVPGVWGPYFSAMVPGFWLNEG 10 20 30 330 340 350 360 370 380 pF1KE3 GQSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 GQSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHVW 40 50 60 70 80 90 390 400 410 420 430 440 pF1KE3 PDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 PDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSI 100 110 120 130 140 150 450 460 470 480 490 500 pF1KE3 STLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 STLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAK 160 170 180 190 200 210 510 520 530 540 550 pF1KE3 MSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD :::::::::::::::::::::::::::::::::::::::::: CCDS60 MSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD 220 230 240 250 551 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:59:59 2016 done: Sun Nov 6 06:00:00 2016 Total Scan time: 3.330 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]