FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6683, 320 aa 1>>>pF1KE6683 320 - 320 aa - 320 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3739+/-0.000698; mu= 13.0444+/- 0.042 mean_var=120.3269+/-24.540, 0's: 0 Z-trim(114.4): 2 B-trim: 399 in 2/52 Lambda= 0.116921 statistics sampled from 15005 (15006) to 15005 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.461), width: 16 Scan time: 2.080 The best scores are: opt bits E(32554) CCDS602.1 BSND gene_id:7809|Hs108|chr1 ( 320) 2250 389.7 1.6e-108 >>CCDS602.1 BSND gene_id:7809|Hs108|chr1 (320 aa) initn: 2250 init1: 2250 opt: 2250 Z-score: 2061.8 bits: 389.7 E(32554): 1.6e-108 Smith-Waterman score: 2250; 100.0% identity (100.0% similar) in 320 aa overlap (1-320:1-320) 10 20 30 40 50 60 pF1KE6 MADEKTFRIGFIVLGLFLLALGTFLMSHDRPQVYGTFYAMGSVMVIGGIIWSMCQCYPKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 MADEKTFRIGFIVLGLFLLALGTFLMSHDRPQVYGTFYAMGSVMVIGGIIWSMCQCYPKI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TFVPADSDFQGILSPKAMGLLENGLAAEMKSPSPQPPYVRLWEEAAYDQSLPDFSHIQMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 TFVPADSDFQGILSPKAMGLLENGLAAEMKSPSPQPPYVRLWEEAAYDQSLPDFSHIQMK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VMSYSEDHRSLLAPEMGQPKLGTSDGGEGGPGDVQAWMEAAVVIHKGSDESEGERRLTQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 VMSYSEDHRSLLAPEMGQPKLGTSDGGEGGPGDVQAWMEAAVVIHKGSDESEGERRLTQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 WPGPLACPQGPAPLASFQDDLDMDSSEGSSPNASPHDREEACSPQQEPQGCRCPLDRFQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 WPGPLACPQGPAPLASFQDDLDMDSSEGSSPNASPHDREEACSPQQEPQGCRCPLDRFQD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 FALIDAPTLEDEPQEGQQWEIALPNNWQRYPRTKVEEKEASDTGGEEPEKEEEDLYYGLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 FALIDAPTLEDEPQEGQQWEIALPNNWQRYPRTKVEEKEASDTGGEEPEKEEEDLYYGLP 250 260 270 280 290 300 310 320 pF1KE6 DGAGDLLPDKELGFEPDTQG :::::::::::::::::::: CCDS60 DGAGDLLPDKELGFEPDTQG 310 320 320 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:23:15 2016 done: Tue Nov 8 15:23:15 2016 Total Scan time: 2.080 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]