FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5153, 106 aa 1>>>pF1KE5153 106 - 106 aa - 106 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7186+/-0.000711; mu= 4.3220+/- 0.043 mean_var=111.8172+/-22.137, 0's: 0 Z-trim(113.3): 5 B-trim: 170 in 1/53 Lambda= 0.121289 statistics sampled from 13930 (13933) to 13930 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.428), width: 16 Scan time: 1.600 The best scores are: opt bits E(32554) CCDS319.1 ATPIF1 gene_id:93974|Hs108|chr1 ( 106) 699 131.6 8.9e-32 CCDS44096.1 ATPIF1 gene_id:93974|Hs108|chr1 ( 60) 400 79.1 3.2e-16 CCDS320.1 ATPIF1 gene_id:93974|Hs108|chr1 ( 71) 400 79.2 3.6e-16 >>CCDS319.1 ATPIF1 gene_id:93974|Hs108|chr1 (106 aa) initn: 699 init1: 699 opt: 699 Z-score: 683.9 bits: 131.6 E(32554): 8.9e-32 Smith-Waterman score: 699; 100.0% identity (100.0% similar) in 106 aa overlap (1-106:1-106) 10 20 30 40 50 60 pF1KE5 MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR 10 20 30 40 50 60 70 80 90 100 pF1KE5 AQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKIKMLKHDD :::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKIKMLKHDD 70 80 90 100 >>CCDS44096.1 ATPIF1 gene_id:93974|Hs108|chr1 (60 aa) initn: 400 init1: 400 opt: 400 Z-score: 404.8 bits: 79.1 E(32554): 3.2e-16 Smith-Waterman score: 400; 100.0% identity (100.0% similar) in 60 aa overlap (1-60:1-60) 10 20 30 40 50 60 pF1KE5 MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR 10 20 30 40 50 60 70 80 90 100 pF1KE5 AQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKIKMLKHDD >>CCDS320.1 ATPIF1 gene_id:93974|Hs108|chr1 (71 aa) initn: 400 init1: 400 opt: 400 Z-score: 403.7 bits: 79.2 E(32554): 3.6e-16 Smith-Waterman score: 400; 100.0% identity (100.0% similar) in 60 aa overlap (1-60:1-60) 10 20 30 40 50 60 pF1KE5 MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MAVTALAARTWLGVWGVRTMQARGFGSDQSENVDRGAGSIREAGGAFGKREQAEEERYFR 10 20 30 40 50 60 70 80 90 100 pF1KE5 AQSREQLAALKKHHEEEIVHHKKEIERLQKEIERHKQKIKMLKHDD CCDS32 HYRLCFEISLG 70 106 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:01:25 2016 done: Mon Nov 7 22:01:26 2016 Total Scan time: 1.600 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]