FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3143, 353 aa 1>>>pF1KE3143 353 - 353 aa - 353 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3955+/-0.000404; mu= 8.4233+/- 0.025 mean_var=170.0286+/-34.029, 0's: 0 Z-trim(117.4): 146 B-trim: 1454 in 2/55 Lambda= 0.098359 statistics sampled from 29178 (29333) to 29178 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.69), E-opt: 0.2 (0.344), width: 16 Scan time: 8.750 The best scores are: opt bits E(85289) NP_115977 (OMIM: 606131) E3 ubiquitin-protein liga ( 353) 2363 347.3 3.1e-95 XP_016858048 (OMIM: 606131) PREDICTED: E3 ubiquiti ( 379) 2348 345.2 1.4e-94 NP_908974 (OMIM: 606469) tripartite motif-containi ( 452) 1449 217.7 4.1e-56 XP_011515918 (OMIM: 606469) PREDICTED: tripartite ( 452) 1449 217.7 4.1e-56 XP_011515917 (OMIM: 606469) PREDICTED: tripartite ( 540) 1449 217.7 4.7e-56 NP_149047 (OMIM: 606469) tripartite motif-containi ( 540) 1449 217.7 4.7e-56 NP_908973 (OMIM: 606469) tripartite motif-containi ( 548) 1449 217.7 4.7e-56 XP_011515915 (OMIM: 606469) PREDICTED: tripartite ( 548) 1449 217.7 4.7e-56 XP_011515916 (OMIM: 606469) PREDICTED: tripartite ( 548) 1449 217.7 4.7e-56 XP_005251373 (OMIM: 606469) PREDICTED: tripartite ( 547) 1446 217.3 6.3e-56 NP_912730 (OMIM: 606474) tripartite motif-containi ( 358) 1437 215.9 1.1e-55 XP_016869397 (OMIM: 606469) PREDICTED: tripartite ( 479) 1111 169.7 1.2e-41 NP_908975 (OMIM: 606469) tripartite motif-containi ( 241) 1020 156.5 5.5e-38 NP_115935 (OMIM: 606474) tripartite motif-containi ( 400) 937 145.0 2.8e-34 XP_016869398 (OMIM: 606469) PREDICTED: tripartite ( 426) 809 126.8 8.5e-29 XP_011515919 (OMIM: 606469) PREDICTED: tripartite ( 426) 809 126.8 8.5e-29 NP_001269308 (OMIM: 600986) tripartite motif-conta ( 551) 363 63.6 1.2e-09 NP_001269307 (OMIM: 600986) tripartite motif-conta ( 633) 363 63.7 1.3e-09 NP_001243528 (OMIM: 600986) tripartite motif-conta ( 736) 363 63.7 1.4e-09 NP_001243530 (OMIM: 600986) tripartite motif-conta ( 746) 363 63.8 1.4e-09 XP_016857882 (OMIM: 600986) PREDICTED: tripartite ( 746) 363 63.8 1.4e-09 NP_079334 (OMIM: 600986) tripartite motif-containi ( 759) 363 63.8 1.5e-09 XP_011508304 (OMIM: 600986) PREDICTED: tripartite ( 788) 363 63.8 1.5e-09 XP_016865112 (OMIM: 609317) PREDICTED: E3 ubiquiti ( 529) 334 59.5 2e-08 NP_001287681 (OMIM: 609317) E3 ubiquitin-protein l ( 573) 334 59.5 2.1e-08 NP_001287688 (OMIM: 609317) E3 ubiquitin-protein l ( 716) 334 59.6 2.4e-08 NP_061170 (OMIM: 609317) E3 ubiquitin-protein liga ( 728) 334 59.6 2.5e-08 XP_016865111 (OMIM: 609317) PREDICTED: E3 ubiquiti ( 733) 334 59.6 2.5e-08 XP_016865110 (OMIM: 609317) PREDICTED: E3 ubiquiti ( 745) 334 59.6 2.5e-08 NP_001180208 (OMIM: 189960,300000,300552) E3 ubiqu ( 489) 319 57.3 8.1e-08 XP_016885031 (OMIM: 189960,300000,300552) PREDICTE ( 489) 319 57.3 8.1e-08 XP_016885029 (OMIM: 189960,300000,300552) PREDICTE ( 552) 319 57.4 8.8e-08 NP_001180206 (OMIM: 189960,300000,300552) E3 ubiqu ( 667) 319 57.5 1e-07 NP_001092094 (OMIM: 189960,300000,300552) E3 ubiqu ( 667) 319 57.5 1e-07 NP_150632 (OMIM: 189960,300000,300552) E3 ubiquiti ( 667) 319 57.5 1e-07 XP_016885025 (OMIM: 189960,300000,300552) PREDICTE ( 667) 319 57.5 1e-07 NP_000372 (OMIM: 189960,300000,300552) E3 ubiquiti ( 667) 319 57.5 1e-07 NP_001287818 (OMIM: 610584) tripartite motif-conta ( 721) 315 56.9 1.6e-07 XP_011542494 (OMIM: 610584) PREDICTED: tripartite ( 781) 315 57.0 1.7e-07 NP_001004342 (OMIM: 610584) tripartite motif-conta ( 783) 315 57.0 1.7e-07 XP_016856812 (OMIM: 610584) PREDICTED: tripartite ( 854) 315 57.0 1.8e-07 NP_443210 (OMIM: 606555) E3 ubiquitin-protein liga ( 550) 296 54.1 8.4e-07 XP_016876439 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 593) 296 54.2 8.9e-07 XP_016876438 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 611) 296 54.2 9.1e-07 XP_016876437 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 688) 296 54.2 9.9e-07 XP_016876436 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 692) 296 54.2 1e-06 XP_016876435 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 706) 296 54.2 1e-06 NP_055978 (OMIM: 606555) E3 ubiquitin-protein liga ( 710) 296 54.2 1e-06 XP_016876434 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 710) 296 54.2 1e-06 XP_005267359 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 714) 296 54.2 1e-06 >>NP_115977 (OMIM: 606131) E3 ubiquitin-protein ligase T (353 aa) initn: 2363 init1: 2363 opt: 2363 Z-score: 1830.8 bits: 347.3 E(85289): 3.1e-95 Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_115 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ 310 320 330 340 350 >>XP_016858048 (OMIM: 606131) PREDICTED: E3 ubiquitin-pr (379 aa) initn: 2504 init1: 2348 opt: 2348 Z-score: 1818.9 bits: 345.2 E(85289): 1.4e-94 Smith-Waterman score: 2348; 99.4% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQ 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ :::::::::::::::::::::::::::::::::::::::::::::::::::.. XP_016 GFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGKKFIYLHSF 310 320 330 340 350 360 XP_016 VPSFIPQQSEVPTVCEALC 370 >>NP_908974 (OMIM: 606469) tripartite motif-containing p (452 aa) initn: 864 init1: 820 opt: 1449 Z-score: 1128.4 bits: 217.7 E(85289): 4.1e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: NP_908 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: NP_908 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. NP_908 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: NP_908 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. NP_908 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: NP_908 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 NP_908 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>XP_011515918 (OMIM: 606469) PREDICTED: tripartite moti (452 aa) initn: 864 init1: 820 opt: 1449 Z-score: 1128.4 bits: 217.7 E(85289): 4.1e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: XP_011 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: XP_011 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. XP_011 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: XP_011 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. XP_011 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: XP_011 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 XP_011 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>XP_011515917 (OMIM: 606469) PREDICTED: tripartite moti (540 aa) initn: 843 init1: 820 opt: 1449 Z-score: 1127.4 bits: 217.7 E(85289): 4.7e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: XP_011 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: XP_011 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. XP_011 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: XP_011 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. XP_011 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: XP_011 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 XP_011 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>NP_149047 (OMIM: 606469) tripartite motif-containing p (540 aa) initn: 843 init1: 820 opt: 1449 Z-score: 1127.4 bits: 217.7 E(85289): 4.7e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: NP_149 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: NP_149 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. NP_149 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: NP_149 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. NP_149 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: NP_149 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 NP_149 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>NP_908973 (OMIM: 606469) tripartite motif-containing p (548 aa) initn: 843 init1: 820 opt: 1449 Z-score: 1127.3 bits: 217.7 E(85289): 4.7e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: NP_908 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: NP_908 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. NP_908 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: NP_908 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. NP_908 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: NP_908 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 NP_908 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>XP_011515915 (OMIM: 606469) PREDICTED: tripartite moti (548 aa) initn: 843 init1: 820 opt: 1449 Z-score: 1127.3 bits: 217.7 E(85289): 4.7e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: XP_011 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: XP_011 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. XP_011 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: XP_011 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. XP_011 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: XP_011 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 XP_011 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>XP_011515916 (OMIM: 606469) PREDICTED: tripartite moti (548 aa) initn: 843 init1: 820 opt: 1449 Z-score: 1127.3 bits: 217.7 E(85289): 4.7e-56 Smith-Waterman score: 1449; 60.4% identity (84.3% similar) in 351 aa overlap (1-351:5-345) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: XP_011 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: XP_011 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. XP_011 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: XP_011 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. XP_011 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: . :.::.::::. ::..:: XP_011 KIEHGYENMNHFTVNLNREEKIIREIDF--------YREDEDEEEEEGGEGEKEGEGEVG 300 310 320 330 340 350 XP_011 GEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPV 360 370 380 390 400 410 >>XP_005251373 (OMIM: 606469) PREDICTED: tripartite moti (547 aa) initn: 853 init1: 830 opt: 1446 Z-score: 1125.0 bits: 217.3 E(85289): 6.3e-56 Smith-Waterman score: 1446; 60.7% identity (83.8% similar) in 351 aa overlap (1-351:5-350) 10 20 30 40 50 pF1KE3 MDYKSSLIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAAN ..::: . .. . :.:::::::::::::::::::::::::::::::::.:::::.: XP_005 MSASLNYKS-FSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASN 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 PYWTSRGSSVSMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQK :: .::... ::::::::.:::::..:::::::::::::::::::::::: :.:: .: XP_005 PYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-STRPEKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISM ...:::.:::.:.::::::.:::::::.::::: :: :.:::: ::: ::.::.. :.. XP_005 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 LVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQE ::..::::: .:.::::. .. .: .. :.:: .::: ::.::.:.:.:. : ::. :: XP_005 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 KKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLG .:: ..:::..:...:.. .::::..:: .::: :.:: .:: :.:.: ::::. :. XP_005 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTEQGFENMDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEEGHQ : :.:.:::. ::..:.. .: ::: ::.:: ::: : :. ::. : XP_005 KIEHGYENMNHFTVNLNREEKIIREIDFYRDEDEE---EEEGGEGEKEGEGEVGGEAVEV 300 310 320 330 340 350 XP_005 EEVENVQTEFPGEDENPEKASELSQVELQAAPGALPVSSPEPPPALPPAADAPVTQGEVV 360 370 380 390 400 410 353 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:26:04 2016 done: Sun Nov 6 19:26:05 2016 Total Scan time: 8.750 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]