Result of FASTA (ccds) for
pFN21AE5837
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5837, 1682 aa
1>>>pF1KE5837 1682 - 1682 aa - 1682 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 18.0269+/-0.00127; mu= -31.3724+/- 0.077
mean_var=878.5914+/-195.122, 0's: 0 Z-trim(116.4): 12 B-trim: 0 in 0/56
Lambda= 0.043269
statistics sampled from 17009 (17020) to 17009 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.523), width: 16
Scan time: 4.730
The best scores are: opt bits E(32554)
CCDS151.1 PRDM2 gene_id:7799|Hs108|chr1 (1682) 11275 720.6 1.1e-206
CCDS150.1 PRDM2 gene_id:7799|Hs108|chr1 (1718) 11248 719.0 3.5e-206
CCDS30603.1 PRDM2 gene_id:7799|Hs108|chr1 (1481) 9916 635.8 3.4e-181
CCDS44061.1 PRDM2 gene_id:7799|Hs108|chr1 ( 226) 1161 88.6 2.6e-17
>>CCDS151.1 PRDM2 gene_id:7799|Hs108|chr1 (1682 aa)
initn: 11275 init1: 11275 opt: 11275 Z-score: 3824.3 bits: 720.6 E(32554): 1.1e-206
Smith-Waterman score: 11275; 100.0% identity (100.0% similar) in 1682 aa overlap (1-1682:1-1682)
10 20 30 40 50 60
pF1KE5 MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 KGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 TPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 NENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEANGDVFETFMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 NENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEANGDVFETFMF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 PCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSSVVEENGEVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSSVVEENGEVK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 ELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQAQATQNVYVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQAQATQNVYVP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 STEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESASADLYGINC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 STEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESASADLYGINC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 LLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIKAETDSDPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIKAETDSDPMV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 PSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEIAKLGPVCVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEIAKLGPVCVS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 APASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSKKSKLESHSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 APASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSKKSKLESHSD
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 SPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVKQKAEGTGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVKQKAEGTGKT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 PVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGID
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE5 LPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE5 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE5 PILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE5 ISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVCNVCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVCNVCE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE5 SPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNIFVCSVCKKEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNIFVCSVCKKEF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE5 AFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE5 ELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNF
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE5 TTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPK
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE5 NGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 NGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSA
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE5 KQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPPKKKVSHSSKKGGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 KQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPPKKKVSHSSKKGGHS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE5 SPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQVPLPSSSFRSKQNVKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQVPLPSSSFRSKQNVKFA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE5 ASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQLSSKTSRSLHVRVQKSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQLSSKTSRSLHVRVQKSKA
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE5 VLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLSENKREDGSAKQELKDFRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 VLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLSENKREDGSAKQELKDFRN
1630 1640 1650 1660 1670 1680
pF1KE5 FL
::
CCDS15 FL
>>CCDS150.1 PRDM2 gene_id:7799|Hs108|chr1 (1718 aa)
initn: 11248 init1: 11248 opt: 11248 Z-score: 3815.1 bits: 719.0 E(32554): 3.5e-206
Smith-Waterman score: 11248; 100.0% identity (100.0% similar) in 1678 aa overlap (1-1678:1-1678)
10 20 30 40 50 60
pF1KE5 MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 KGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 KGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVASQEVPPELA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 TPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 NENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEANGDVFETFMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 NENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEANGDVFETFMF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 PCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSSVVEENGEVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSSVVEENGEVK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 ELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQAQATQNVYVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQAQATQNVYVP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE5 STEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESASADLYGINC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 STEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESASADLYGINC
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE5 LLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIKAETDSDPMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIKAETDSDPMV
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE5 PSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEIAKLGPVCVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEIAKLGPVCVS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE5 APASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSKKSKLESHSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 APASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSKKSKLESHSD
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE5 SPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVKQKAEGTGKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVKQKAEGTGKT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE5 PVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKVLLNEYNGID
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE5 LPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQ
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE5 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPL
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE5 PILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 PILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE5 ISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVCNVCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFNKNFVCNVCE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE5 SPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNIFVCSVCKKEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNIFVCSVCKKEF
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE5 AFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 AFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLETSKEEE
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE5 ELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNF
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE5 TTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 TTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPK
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE5 NGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 NGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSA
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE5 KQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPPKKKVSHSSKKGGHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 KQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPPKKKVSHSSKKGGHS
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE5 SPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQVPLPSSSFRSKQNVKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 SPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQVPLPSSSFRSKQNVKFA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE5 ASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQLSSKTSRSLHVRVQKSKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 ASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQLSSKTSRSLHVRVQKSKA
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE5 VLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLSENKREDGSAKQELKDFRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 VLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLSENKREDGSAKQELKDFSY
1630 1640 1650 1660 1670 1680
pF1KE5 FL
CCDS15 SLRLASRCSPPAAPYITRQYRKVKAPAAAQFQGPFFKE
1690 1700 1710
>>CCDS30603.1 PRDM2 gene_id:7799|Hs108|chr1 (1481 aa)
initn: 9916 init1: 9916 opt: 9916 Z-score: 3366.6 bits: 635.8 E(32554): 3.4e-181
Smith-Waterman score: 9916; 100.0% identity (100.0% similar) in 1481 aa overlap (202-1682:1-1481)
180 190 200 210 220 230
pF1KE5 KKKSQENKNKGNKIQDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVA
::::::::::::::::::::::::::::::
CCDS30 MRDSAEGPKEDEEKPSASALEQPATLQEVA
10 20 30
240 250 260 270 280 290
pF1KE5 SQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SQEVPPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELED
40 50 60 70 80 90
300 310 320 330 340 350
pF1KE5 EGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 EGEEEASMPNENSVKEPEIRCDEKPEDLLEEPKTTSEETLEDCSEVTPAMQIPRTKEEAN
100 110 120 130 140 150
360 370 380 390 400 410
pF1KE5 GDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYCGKAFGTQINRRRHERR
160 170 180 190 200 210
420 430 440 450 460 470
pF1KE5 HEAGLKRKPSQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 HEAGLKRKPSQTLQPSEDLADGKASGENVASKDDSSPPSLGPDCLIMNSEKASQDTINSS
220 230 240 250 260 270
480 490 500 510 520 530
pF1KE5 VVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLEEPQPPAEQA
280 290 300 310 320 330
540 550 560 570 580 590
pF1KE5 QATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 QATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQTNNNTSNCDVIEMESA
340 350 360 370 380 390
600 610 620 630 640 650
pF1KE5 SADLYGINCLLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SADLYGINCLLTPVTVEITQNIKTTQVPVTEDLPKEPLGSTNSEAKKRRTASPPALPKIK
400 410 420 430 440 450
660 670 680 690 700 710
pF1KE5 AETDSDPMVPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AETDSDPMVPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLLQTQDKLTPAGISATEI
460 470 480 490 500 510
720 730 740 750 760 770
pF1KE5 AKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFGKPSDGKAAWTDAGLTSK
520 530 540 550 560 570
780 790 800 810 820 830
pF1KE5 KSKLESHSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 KSKLESHSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTASSAFSSVCNQQPLDLSSGVK
580 590 600 610 620 630
840 850 860 870 880 890
pF1KE5 QKAEGTGKTPVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 QKAEGTGKTPVQWESVLDLSVHKKHCSDSEGKEFKESHSVQPTCSAVKKRKPTTCMLQKV
640 650 660 670 680 690
900 910 920 930 940 950
pF1KE5 LLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LLNEYNGIDLPVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPAL
700 710 720 730 740 750
960 970 980 990 1000 1010
pF1KE5 QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 QTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPL
760 770 780 790 800 810
1020 1030 1040 1050 1060 1070
pF1KE5 SNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SNATAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSS
820 830 840 850 860 870
1080 1090 1100 1110 1120 1130
pF1KE5 SPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 SPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVVQETFN
880 890 900 910 920 930
1140 1150 1160 1170 1180 1190
pF1KE5 KNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 KNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFKDKTDLSEHRFLLHGVGNIF
940 950 960 970 980 990
1200 1210 1220 1230 1240 1250
pF1KE5 VCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 VCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHEFESGTLRPQNFTDPSKAHVEHMQSLPED
1000 1010 1020 1030 1040 1050
1260 1270 1280 1290 1300 1310
pF1KE5 PLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRNPM
1060 1070 1080 1090 1100 1110
1320 1330 1340 1350 1360 1370
pF1KE5 GIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 GIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPV
1120 1130 1140 1150 1160 1170
1380 1390 1400 1410 1420 1430
pF1KE5 PLKQTVQPKNGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PLKQTVQPKNGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQK
1180 1190 1200 1210 1220 1230
1440 1450 1460 1470 1480 1490
pF1KE5 AILQKNKSAKQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPPKKKVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AILQKNKSAKQKADLKNACESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPPKKKVS
1240 1250 1260 1270 1280 1290
1500 1510 1520 1530 1540 1550
pF1KE5 HSSKKGGHSSPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQVPLPSSSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 HSSKKGGHSSPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTRARSSGPTQVPLPSSSF
1300 1310 1320 1330 1340 1350
1560 1570 1580 1590 1600 1610
pF1KE5 RSKQNVKFAASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQLSSKTSRSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RSKQNVKFAASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAVAKNHSAQLSSKTSRSL
1360 1370 1380 1390 1400 1410
1620 1630 1640 1650 1660 1670
pF1KE5 HVRVQKSKAVLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLSENKREDGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 HVRVQKSKAVLQSKSTLASKKRTDRFNIKSRERSGGPVTRSLQLAAAADLSENKREDGSA
1420 1430 1440 1450 1460 1470
1680
pF1KE5 KQELKDFRNFL
:::::::::::
CCDS30 KQELKDFRNFL
1480
>>CCDS44061.1 PRDM2 gene_id:7799|Hs108|chr1 (226 aa)
initn: 1161 init1: 1161 opt: 1161 Z-score: 424.4 bits: 88.6 E(32554): 2.6e-17
Smith-Waterman score: 1162; 85.1% identity (91.3% similar) in 208 aa overlap (1-199:1-208)
10 20 30 40 50 60
pF1KE5 MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MNQNTTEPVAATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
70 80 90 100 110 120
130 140 150 160 170
pF1KE5 AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKS-----
::::::::::::::::::::::::::::::::::::::::::::::::::. ..
CCDS44 AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKATASAWRPDA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE5 --QENKNKGNKI--QDIQLKTSEPDFTSANMRDSAEGPKEDEEKPSASALEQPATLQEVA
:. ... ..: . .::. : : .:
CCDS44 LHQRPRTSPGSIGRSKLQLQPSSRDHSSKSRHSGCSLTAPEVTWNQ
190 200 210 220
1682 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 07:07:56 2016 done: Tue Nov 8 07:07:57 2016
Total Scan time: 4.730 Total Display time: 0.310
Function used was FASTA [36.3.4 Apr, 2011]