FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1641, 155 aa 1>>>pF1KE1641 155 - 155 aa - 155 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3071+/-0.000511; mu= 12.8555+/- 0.031 mean_var=67.3565+/-13.267, 0's: 0 Z-trim(114.9): 9 B-trim: 0 in 0/50 Lambda= 0.156273 statistics sampled from 15490 (15495) to 15490 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.826), E-opt: 0.2 (0.476), width: 16 Scan time: 1.900 The best scores are: opt bits E(32554) CCDS117.2 CORT gene_id:1325|Hs108|chr1 ( 105) 721 170.0 3.6e-43 CCDS72699.1 CORT gene_id:100526739|Hs108|chr1 ( 143) 516 123.8 3.8e-29 CCDS114.1 CORT gene_id:100526739|Hs108|chr1 ( 164) 516 123.9 4.3e-29 >>CCDS117.2 CORT gene_id:1325|Hs108|chr1 (105 aa) initn: 721 init1: 721 opt: 721 Z-score: 888.5 bits: 170.0 E(32554): 3.6e-43 Smith-Waterman score: 721; 100.0% identity (100.0% similar) in 105 aa overlap (51-155:1-105) 30 40 50 60 70 80 pF1KE1 ETQVPKTLISGLPGRKSSSRVGEKLQSAHKMPLSPGLLLLLLSGATATAALPLEGGPTGR :::::::::::::::::::::::::::::: CCDS11 MPLSPGLLLLLLSGATATAALPLEGGPTGR 10 20 30 90 100 110 120 130 140 pF1KE1 DSEHMQEAAGIRKSSLLTFLAWWFEWTSQASAGPLIGEEAREVARRQEGAPPQQSARRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DSEHMQEAAGIRKSSLLTFLAWWFEWTSQASAGPLIGEEAREVARRQEGAPPQQSARRDR 40 50 60 70 80 90 150 pF1KE1 MPCRNFFWKTFSSCK ::::::::::::::: CCDS11 MPCRNFFWKTFSSCK 100 >>CCDS72699.1 CORT gene_id:100526739|Hs108|chr1 (143 aa) initn: 516 init1: 516 opt: 516 Z-score: 636.8 bits: 123.8 E(32554): 3.8e-29 Smith-Waterman score: 516; 97.3% identity (98.7% similar) in 75 aa overlap (81-155:69-143) 60 70 80 90 100 110 pF1KE1 MPLSPGLLLLLLSGATATAALPLEGGPTGRDSEHMQEAAGIRKSSLLTFLAWWFEWTSQA .: ::::::::::::::::::::::::::: CCDS72 NFAKDLEMFARHAKRTTINTEDVKLLARRSNSLHMQEAAGIRKSSLLTFLAWWFEWTSQA 40 50 60 70 80 90 120 130 140 150 pF1KE1 SAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK ::::::::::::::::::::::::::::::::::::::::::::: CCDS72 SAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK 100 110 120 130 140 >>CCDS114.1 CORT gene_id:100526739|Hs108|chr1 (164 aa) initn: 516 init1: 516 opt: 516 Z-score: 635.9 bits: 123.9 E(32554): 4.3e-29 Smith-Waterman score: 516; 97.3% identity (98.7% similar) in 75 aa overlap (81-155:90-164) 60 70 80 90 100 110 pF1KE1 MPLSPGLLLLLLSGATATAALPLEGGPTGRDSEHMQEAAGIRKSSLLTFLAWWFEWTSQA .: ::::::::::::::::::::::::::: CCDS11 NFAKDLEMFARHAKRTTINTEDVKLLARRSNSLHMQEAAGIRKSSLLTFLAWWFEWTSQA 60 70 80 90 100 110 120 130 140 150 pF1KE1 SAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK ::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SAGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK 120 130 140 150 160 155 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 19:31:52 2016 done: Sun Nov 6 19:31:53 2016 Total Scan time: 1.900 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]