FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3705, 138 aa 1>>>pF1KE3705 138 - 138 aa - 138 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6355+/-0.000798; mu= 10.3801+/- 0.048 mean_var=75.0121+/-14.531, 0's: 0 Z-trim(108.6): 32 B-trim: 131 in 1/50 Lambda= 0.148084 statistics sampled from 10292 (10317) to 10292 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.317), width: 16 Scan time: 1.540 The best scores are: opt bits E(32554) CCDS115.1 CENPS gene_id:378708|Hs108|chr1 ( 138) 867 193.8 2.9e-50 CCDS114.1 CORT gene_id:100526739|Hs108|chr1 ( 164) 586 133.8 3.9e-32 CCDS53266.1 CORT gene_id:100526739|Hs108|chr1 ( 77) 448 104.1 1.6e-23 >>CCDS115.1 CENPS gene_id:378708|Hs108|chr1 (138 aa) initn: 867 init1: 867 opt: 867 Z-score: 1016.0 bits: 193.8 E(32554): 2.9e-50 Smith-Waterman score: 867; 100.0% identity (100.0% similar) in 138 aa overlap (1-138:1-138) 10 20 30 40 50 60 pF1KE3 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED 70 80 90 100 110 120 130 pF1KE3 GSKNSRQPAEAGVVESEN :::::::::::::::::: CCDS11 GSKNSRQPAEAGVVESEN 130 >>CCDS114.1 CORT gene_id:100526739|Hs108|chr1 (164 aa) initn: 586 init1: 586 opt: 586 Z-score: 690.4 bits: 133.8 E(32554): 3.9e-32 Smith-Waterman score: 586; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92) 10 20 30 40 50 60 pF1KE3 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED :::::::::::::::::::::::::::::::: CCDS11 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLHMQEAAGIRKSSLLTFLAWWFEWTSQAS 70 80 90 100 110 120 130 pF1KE3 GSKNSRQPAEAGVVESEN CCDS11 AGPLIGEEAREVARRQEGAPPQQSARRDRMPCRNFFWKTFSSCK 130 140 150 160 >>CCDS53266.1 CORT gene_id:100526739|Hs108|chr1 (77 aa) initn: 448 init1: 448 opt: 448 Z-score: 536.0 bits: 104.1 E(32554): 1.6e-23 Smith-Waterman score: 448; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE3 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED ::::::::: CCDS53 FAKDLEMFASICRKRQE 70 138 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:53:09 2016 done: Mon Nov 7 18:53:09 2016 Total Scan time: 1.540 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]