FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6167, 134 aa 1>>>pF1KE6167 134 - 134 aa - 134 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4258+/-0.000739; mu= 9.8782+/- 0.044 mean_var=56.5394+/-11.671, 0's: 0 Z-trim(107.0): 23 B-trim: 0 in 0/51 Lambda= 0.170568 statistics sampled from 9286 (9307) to 9286 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.286), width: 16 Scan time: 1.310 The best scores are: opt bits E(32554) CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 927 235.9 5.6e-63 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 562 146.1 8.8e-36 CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 556 144.6 1.7e-35 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 485 127.1 3.1e-30 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 319 86.3 6.1e-18 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 314 85.1 1.5e-17 CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 312 84.6 2.3e-17 CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 309 83.9 3.9e-17 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 307 83.3 4.7e-17 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 307 83.3 4.7e-17 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 306 83.1 5.8e-17 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 303 82.4 1.1e-16 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 301 81.9 1.3e-16 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 263 72.5 9e-14 >>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa) initn: 927 init1: 927 opt: 927 Z-score: 1244.1 bits: 235.9 E(32554): 5.6e-63 Smith-Waterman score: 927; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134) 10 20 30 40 50 60 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM 70 80 90 100 110 120 130 pF1KE6 FCEGQVCKQTFQRA :::::::::::::: CCDS10 FCEGQVCKQTFQRA 130 >>CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 (197 aa) initn: 589 init1: 562 opt: 562 Z-score: 755.9 bits: 146.1 E(32554): 8.8e-36 Smith-Waterman score: 562; 57.1% identity (82.7% similar) in 133 aa overlap (1-133:63-195) 10 20 30 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFAT ::.:..: : .: ..::: :. :: .. : CCDS31 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE6 RKIAKLLKPQKVIEQNGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWD ::::.::::.: : :.:: . :.: :..:::.. :.::.::.:: :.:.::: . : :: CCDS31 RKIANLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMTTVSWD 100 110 120 130 140 150 100 110 120 130 pF1KE6 NDRLTCIQKGEKKNRGWTHWIEGDKLHLEMFCEGQVCKQTFQRA .:.: :.:::::..::::.:::::.::::: :: ::::.:.. CCDS31 GDKLQCVQKGEKEGRGWTQWIEGDELHLEMRVEGVVCKQVFKKVQ 160 170 180 190 >>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa) initn: 558 init1: 545 opt: 556 Z-score: 750.7 bits: 144.6 E(32554): 1.7e-35 Smith-Waterman score: 556; 59.4% identity (80.5% similar) in 133 aa overlap (1-133:1-133) 10 20 30 40 50 60 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN : : .::: . :..:::::: :: ::::::::: : :::.:.::.: .:.:..:: CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM : : : :: :::: ...::::. :.:: :..: :.:.:::::.:::: .:::::::.::. CCDS31 YDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLVCVQKGEKENRGWKQWIEGDKLYLEL 70 80 90 100 110 120 130 pF1KE6 FCEGQVCKQTFQRA : :::.:.:.. CCDS31 TCGDQVCRQVFKKK 130 >>CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 (135 aa) initn: 498 init1: 485 opt: 485 Z-score: 656.2 bits: 127.1 E(32554): 3.1e-30 Smith-Waterman score: 485; 49.6% identity (82.7% similar) in 133 aa overlap (1-133:1-133) 10 20 30 40 50 60 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN :: .:.: . ..:. :.: :. ::.:..:.:::: ::::.: ::..:. .:..: :..:: CCDS85 MPPNLTGYYRFVSQKNMEDYLQALNISLAVRKIALLLKPDKEIEHQGNHMTVRTLSTFRN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM : :.: :: ::.:: :..:.:::...: :....:.:.:::: :::: ::.::. :.::. CCDS85 YTVQFDVGVEFEEDLRSVDGRKCQTIVTWEEEHLVCVQKGEVPNRGWRHWLEGEMLYLEL 70 80 90 100 110 120 130 pF1KE6 FCEGQVCKQTFQRA . ::.:.:.. CCDS85 TARDAVCEQVFRKVR 130 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 338 init1: 250 opt: 319 Z-score: 435.6 bits: 86.3 E(32554): 6.1e-18 Smith-Waterman score: 319; 39.4% identity (70.1% similar) in 127 aa overlap (7-133:7-131) 10 20 30 40 50 60 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN ::: :..: ::. :: .::. ::::..:.. :: .::.::: .:..:.:...: CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM ..::.: :::: . :.:: ::.: :. .:. .:: . .. .. . :: : . CCDS34 TEISFKLGVEFDETT--ADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTL 70 80 90 100 110 130 pF1KE6 FCEGQVCKQTFQRA :: .:... CCDS34 THGTAVCTRTYEKEA 120 130 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 296 init1: 147 opt: 314 Z-score: 428.7 bits: 85.1 E(32554): 1.5e-17 Smith-Waterman score: 314; 39.3% identity (69.3% similar) in 140 aa overlap (1-133:1-137) 10 20 30 40 50 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIA--KLLKPQKVIEQNGDSFTIHTNSSL :: ..::.: .. :.::: . .::.. :::: :: :.:.::.: :.:.... CCDS11 MP-NFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDND-RLTCIQK---GEKKNRGWTHWIEGD :. ..:::::::.:.. .:.: ::::: :... ...: :: :: . .::. . .: CCDS11 RTTEINFKVGEEFEEQT--VDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTND 60 70 80 90 100 110 120 130 pF1KE6 -KLHLEMFCEGQVCKQTFQRA .: : : . :: ... : CCDS11 GELILTMTADDVVCTRVYVRE 120 130 >>CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 (153 aa) initn: 325 init1: 312 opt: 312 Z-score: 425.3 bits: 84.6 E(32554): 2.3e-17 Smith-Waterman score: 312; 52.9% identity (80.0% similar) in 85 aa overlap (1-85:63-147) 10 20 30 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFAT ::.:..: : .: ..::: :. :: .. : CCDS46 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE6 RKIAKLLKPQKVIEQNGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWD ::::.::::.: : :.:: . :.: :..:::.. :.::.::.:: :.:.::: : CCDS46 RKIANLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMSETGFS 100 110 120 130 140 150 100 110 120 130 pF1KE6 NDRLTCIQKGEKKNRGWTHWIEGDKLHLEMFCEGQVCKQTFQRA CCDS46 S >>CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 (157 aa) initn: 309 init1: 309 opt: 309 Z-score: 421.1 bits: 83.9 E(32554): 3.9e-17 Smith-Waterman score: 309; 53.0% identity (80.7% similar) in 83 aa overlap (1-83:63-145) 10 20 30 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFAT ::.:..: : .: ..::: :. :: .. : CCDS46 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE6 RKIAKLLKPQKVIEQNGDSFTIHTNSSLRNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWD ::::.::::.: : :.:: . :.: :..:::.. :.::.::.:: :.:.::: CCDS46 RKIANLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMAGVQSR 100 110 120 130 140 150 100 110 120 130 pF1KE6 NDRLTCIQKGEKKNRGWTHWIEGDKLHLEMFCEGQVCKQTFQRA CCDS46 DLSSL >>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa) initn: 313 init1: 236 opt: 307 Z-score: 419.7 bits: 83.3 E(32554): 4.7e-17 Smith-Waterman score: 307; 39.8% identity (68.0% similar) in 128 aa overlap (7-134:7-132) 10 20 30 40 50 60 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN ::: :.::.::. :: .:. :::::.: . ::. .: ::: .::...:...: CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM ..: .:.:::: . :.:: :: . :. :. .:: . :. . : ::: .: CCDS62 TEISFILGQEFDEVTA--DDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVEC 70 80 90 100 110 130 pF1KE6 FCEGQVCKQTFQRA .: . ....:: CCDS62 VMKGVTSTRVYERA 120 130 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 307 init1: 225 opt: 307 Z-score: 419.7 bits: 83.3 E(32554): 4.7e-17 Smith-Waterman score: 307; 37.3% identity (70.1% similar) in 134 aa overlap (1-134:1-132) 10 20 30 40 50 60 pF1KE6 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN : . .:: : .:.::. :: :::. ::::..... :: .: :.::. .:.: :...: CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM ..:..:::::: . :.:.:::.: :.:.:. ::: . :. .... :. :. . . CCDS51 TEISFQLGEEFDETT--ADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTL 70 80 90 100 110 130 pF1KE6 FCEGQVCKQTFQRA : . ...: CCDS51 TFGDVVAVRHYEKA 120 130 134 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:01:12 2016 done: Tue Nov 8 10:01:12 2016 Total Scan time: 1.310 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]