Result of FASTA (omim) for
pFN21AE1579
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1579, 81 aa
1>>>pF1KE1579 81 - 81 aa - 81 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.3994+/-0.00023; mu= 12.0496+/- 0.014
mean_var=44.8615+/- 9.125, 0's: 0 Z-trim(121.1): 22 B-trim: 1653 in 1/57
Lambda= 0.191486
statistics sampled from 37253 (37275) to 37253 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.825), E-opt: 0.2 (0.437), width: 16
Scan time: 4.340
The best scores are: opt bits E(85289)
NP_001012329 (OMIM: 607758) beta-catenin-interacti ( 81) 520 149.7 4.9e-37
XP_016857343 (OMIM: 607758) PREDICTED: beta-cateni ( 81) 520 149.7 4.9e-37
XP_016857342 (OMIM: 607758) PREDICTED: beta-cateni ( 81) 520 149.7 4.9e-37
NP_064633 (OMIM: 607758) beta-catenin-interacting ( 81) 520 149.7 4.9e-37
XP_016857344 (OMIM: 607758) PREDICTED: beta-cateni ( 81) 520 149.7 4.9e-37
NP_001303902 (OMIM: 610458) protein LZIC isoform a ( 190) 183 56.8 1.1e-08
NP_115744 (OMIM: 610458) protein LZIC isoform a [H ( 190) 183 56.8 1.1e-08
NP_001303903 (OMIM: 610458) protein LZIC isoform b ( 211) 183 56.8 1.2e-08
NP_001303904 (OMIM: 610458) protein LZIC isoform c ( 205) 158 49.9 1.4e-06
XP_005263563 (OMIM: 610458) PREDICTED: protein LZI ( 205) 158 49.9 1.4e-06
XP_016858035 (OMIM: 610458) PREDICTED: protein LZI ( 176) 152 48.2 3.7e-06
XP_016858036 (OMIM: 610458) PREDICTED: protein LZI ( 176) 152 48.2 3.7e-06
>>NP_001012329 (OMIM: 607758) beta-catenin-interacting p (81 aa)
initn: 520 init1: 520 opt: 520 Z-score: 786.0 bits: 149.7 E(85289): 4.9e-37
Smith-Waterman score: 520; 100.0% identity (100.0% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
10 20 30 40 50 60
70 80
pF1KE1 DQGAEDVVMAFSRSETEDRRQ
:::::::::::::::::::::
NP_001 DQGAEDVVMAFSRSETEDRRQ
70 80
>>XP_016857343 (OMIM: 607758) PREDICTED: beta-catenin-in (81 aa)
initn: 520 init1: 520 opt: 520 Z-score: 786.0 bits: 149.7 E(85289): 4.9e-37
Smith-Waterman score: 520; 100.0% identity (100.0% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
10 20 30 40 50 60
70 80
pF1KE1 DQGAEDVVMAFSRSETEDRRQ
:::::::::::::::::::::
XP_016 DQGAEDVVMAFSRSETEDRRQ
70 80
>>XP_016857342 (OMIM: 607758) PREDICTED: beta-catenin-in (81 aa)
initn: 520 init1: 520 opt: 520 Z-score: 786.0 bits: 149.7 E(85289): 4.9e-37
Smith-Waterman score: 520; 100.0% identity (100.0% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
10 20 30 40 50 60
70 80
pF1KE1 DQGAEDVVMAFSRSETEDRRQ
:::::::::::::::::::::
XP_016 DQGAEDVVMAFSRSETEDRRQ
70 80
>>NP_064633 (OMIM: 607758) beta-catenin-interacting prot (81 aa)
initn: 520 init1: 520 opt: 520 Z-score: 786.0 bits: 149.7 E(85289): 4.9e-37
Smith-Waterman score: 520; 100.0% identity (100.0% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_064 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
10 20 30 40 50 60
70 80
pF1KE1 DQGAEDVVMAFSRSETEDRRQ
:::::::::::::::::::::
NP_064 DQGAEDVVMAFSRSETEDRRQ
70 80
>>XP_016857344 (OMIM: 607758) PREDICTED: beta-catenin-in (81 aa)
initn: 520 init1: 520 opt: 520 Z-score: 786.0 bits: 149.7 E(85289): 4.9e-37
Smith-Waterman score: 520; 100.0% identity (100.0% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPPHSI
10 20 30 40 50 60
70 80
pF1KE1 DQGAEDVVMAFSRSETEDRRQ
:::::::::::::::::::::
XP_016 DQGAEDVVMAFSRSETEDRRQ
70 80
>>NP_001303902 (OMIM: 610458) protein LZIC isoform a [Ho (190 aa)
initn: 142 init1: 142 opt: 183 Z-score: 277.2 bits: 56.8 E(85289): 1.1e-08
Smith-Waterman score: 183; 39.5% identity (67.9% similar) in 81 aa overlap (1-81:113-190)
10 20 30
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMG
:.:. :: ...: ::::..: :::.:
NP_001 AAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLG
90 100 110 120 130 140
40 50 60 70 80
pF1KE1 SNLTASEEEFLRTYAGVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ
.:::..: :: . ::.. :::. : : :. : ..:.. :.: ..
NP_001 EKLTADDEAFLSANAGAI---LSQFEKVSTDLGSGDKILALASFEVEKTKK
150 160 170 180 190
>>NP_115744 (OMIM: 610458) protein LZIC isoform a [Homo (190 aa)
initn: 142 init1: 142 opt: 183 Z-score: 277.2 bits: 56.8 E(85289): 1.1e-08
Smith-Waterman score: 183; 39.5% identity (67.9% similar) in 81 aa overlap (1-81:113-190)
10 20 30
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMG
:.:. :: ...: ::::..: :::.:
NP_115 AAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLG
90 100 110 120 130 140
40 50 60 70 80
pF1KE1 SNLTASEEEFLRTYAGVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ
.:::..: :: . ::.. :::. : : :. : ..:.. :.: ..
NP_115 EKLTADDEAFLSANAGAI---LSQFEKVSTDLGSGDKILALASFEVEKTKK
150 160 170 180 190
>>NP_001303903 (OMIM: 610458) protein LZIC isoform b [Ho (211 aa)
initn: 142 init1: 142 opt: 183 Z-score: 276.5 bits: 56.8 E(85289): 1.2e-08
Smith-Waterman score: 183; 39.5% identity (67.9% similar) in 81 aa overlap (1-81:134-211)
10 20 30
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMG
:.:. :: ...: ::::..: :::.:
NP_001 AAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLG
110 120 130 140 150 160
40 50 60 70 80
pF1KE1 SNLTASEEEFLRTYAGVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ
.:::..: :: . ::.. :::. : : :. : ..:.. :.: ..
NP_001 EKLTADDEAFLSANAGAI---LSQFEKVSTDLGSGDKILALASFEVEKTKK
170 180 190 200 210
>>NP_001303904 (OMIM: 610458) protein LZIC isoform c [Ho (205 aa)
initn: 142 init1: 142 opt: 158 Z-score: 239.4 bits: 49.9 E(85289): 1.4e-06
Smith-Waterman score: 158; 40.8% identity (63.4% similar) in 71 aa overlap (1-71:113-180)
10 20 30
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMG
:.:. :: ...: ::::..: :::.:
NP_001 AAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLG
90 100 110 120 130 140
40 50 60 70 80
pF1KE1 SNLTASEEEFLRTYAGVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ
.:::..: :: . ::.. :::. : : : : .
NP_001 EKLTADDEAFLSANAGAI---LSQFEKVSTDLGRPPSYMNYLLDSHPSKNIDVPSKISFL
150 160 170 180 190
NP_001 LKIQDL
200
>>XP_005263563 (OMIM: 610458) PREDICTED: protein LZIC is (205 aa)
initn: 142 init1: 142 opt: 158 Z-score: 239.4 bits: 49.9 E(85289): 1.4e-06
Smith-Waterman score: 158; 40.8% identity (63.4% similar) in 71 aa overlap (1-71:113-180)
10 20 30
pF1KE1 MNREGAPGKSPEEMYIQQKVRVLLMLRKMG
:.:. :: ...: ::::..: :::.:
XP_005 AAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLG
90 100 110 120 130 140
40 50 60 70 80
pF1KE1 SNLTASEEEFLRTYAGVVNSQLSQLPPHSIDQGAEDVVMAFSRSETEDRRQ
.:::..: :: . ::.. :::. : : : : .
XP_005 EKLTADDEAFLSANAGAI---LSQFEKVSTDLGRPPSYMNYLLDSHPSKNIDVPSKISFL
150 160 170 180 190
XP_005 LKIQDL
200
81 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:32:25 2016 done: Sun Nov 6 19:32:26 2016
Total Scan time: 4.340 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]