FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3976, 273 aa 1>>>pF1KE3976 273 - 273 aa - 273 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3542+/-0.000804; mu= 14.2716+/- 0.049 mean_var=59.0589+/-12.140, 0's: 0 Z-trim(106.7): 41 B-trim: 363 in 1/51 Lambda= 0.166890 statistics sampled from 9102 (9136) to 9102 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.281), width: 16 Scan time: 2.330 The best scores are: opt bits E(32554) CCDS102.1 SPSB1 gene_id:80176|Hs108|chr1 ( 273) 1887 462.5 1.4e-130 CCDS3115.1 SPSB4 gene_id:92369|Hs108|chr3 ( 273) 1458 359.2 1.8e-99 CCDS8567.1 SPSB2 gene_id:84727|Hs108|chr12 ( 263) 884 221.0 6.8e-58 CCDS46985.1 FBXO45 gene_id:200933|Hs108|chr3 ( 286) 490 126.2 2.7e-29 >>CCDS102.1 SPSB1 gene_id:80176|Hs108|chr1 (273 aa) initn: 1887 init1: 1887 opt: 1887 Z-score: 2457.7 bits: 462.5 E(32554): 1.4e-130 Smith-Waterman score: 1887; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273) 10 20 30 40 50 60 pF1KE3 MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNND 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 DAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDL 190 200 210 220 230 240 250 260 270 pF1KE3 CRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ ::::::::::::::::::::::::::::::::: CCDS10 CRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ 250 260 270 >>CCDS3115.1 SPSB4 gene_id:92369|Hs108|chr3 (273 aa) initn: 1458 init1: 1458 opt: 1458 Z-score: 1899.5 bits: 359.2 E(32554): 1.8e-99 Smith-Waterman score: 1458; 74.7% identity (90.5% similar) in 273 aa overlap (1-273:1-273) 10 20 30 40 50 60 pF1KE3 MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNND ::::..:..:.:..:.:. :: :.::.: . .:.::: ::::: .. ::: :.:: .: CCDS31 MGQKLSGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNPED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATA ::::::::.::.: :::::::::::.::::::..::::.:::.: :::::::::::::: CCDS31 RSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVA :::::::::.:::.. :::::::::.::::::::::. .::::: :::.: .:::.::. CCDS31 RAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDL ::::.:::::::::::.::::::::::::::::::::::::. :::.::::::::::::: CCDS31 LDMDEGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDL 190 200 210 220 230 240 250 260 270 pF1KE3 CRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ ::::.: ::::.:: .: .:::: ::: :: :: CCDS31 CRRSIRSALGRQRLQDISSLPLPQSLKNYLQYQ 250 260 270 >>CCDS8567.1 SPSB2 gene_id:84727|Hs108|chr12 (263 aa) initn: 879 init1: 417 opt: 884 Z-score: 1152.8 bits: 221.0 E(32554): 6.8e-58 Smith-Waterman score: 889; 50.9% identity (72.9% similar) in 273 aa overlap (1-273:1-263) 10 20 30 40 50 60 pF1KE3 MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNND ::: . .: .. :: . : .:. : : :. ::. :: . .: :.:: .: CCDS85 MGQTALAGGSS---STPTPQALYPDLS----C-PEGLEELLSAPPPDLGAQRRHGWNPKD 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATA : :. ::: : :.:.:::::::. ::: ::.::::.:.:.: ..::::::::::::: CCDS85 CSENIEVKEGG-LYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 DAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVA :::.. :..:.:.: ::::::.::..:::..:. . ::: . : . ::. .::. CCDS85 LAPLQTDHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQ-GEQLEVPERLLVV 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 LDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDL :::..:::.. . : :.: :::::::. :::.::::::.:..:.:::. :: :. : CCDS85 LDMEEGTLGYAIGGTYLGPAFRGLKGRTLYPAVSAVWGQCQVRIRYLGERRAEPHSLLHL 180 190 200 210 220 230 250 260 270 pF1KE3 CRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ : :: :: :::.. .:::: ..: ::::: CCDS85 SRLCVRHNLGDTRLGQVSALPLPPAMKRYLLYQ 240 250 260 >>CCDS46985.1 FBXO45 gene_id:200933|Hs108|chr3 (286 aa) initn: 441 init1: 162 opt: 490 Z-score: 639.5 bits: 126.2 E(32554): 2.7e-29 Smith-Waterman score: 490; 39.4% identity (69.4% similar) in 193 aa overlap (36-227:93-280) 10 20 30 40 50 60 pF1KE3 TGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLL-HSWNNNDRSLN : :.: ..: . .. . :....:: : : CCDS46 CKHWYRCLHGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCSRN 70 80 90 100 110 120 70 80 90 100 110 120 pF1KE3 VFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPL :..:.. . .::.:.:::::. : :.:...: :.:.. : :: ::.:.:: ::. CCDS46 VYIKKNG-FTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEG-PLGTVAVIGIATKRAPM 130 140 150 160 170 180 130 140 150 160 170 180 pF1KE3 HSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMD . ::..:.:.. .::::.: : : :.:. . : .: . . . . . . : :::. CCDS46 QCQGYVALLGSDDQSWGWNLVDNNLLHNGEVNGS--FPQCNNAPK-YQIGERIRVILDME 190 200 210 220 230 190 200 210 220 230 240 pF1KE3 DGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDLCRRS : ::.: ...::::::: :::.::::.:. :. . :: CCDS46 DKTLAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG 240 250 260 270 280 250 260 270 pF1KE3 VRLALGRERLGEIHTLPLPASLKAYLLYQ 273 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:25:28 2016 done: Sun Nov 6 08:25:28 2016 Total Scan time: 2.330 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]