FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5740, 702 aa 1>>>pF1KE5740 702 - 702 aa - 702 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7775+/-0.000884; mu= 14.2587+/- 0.054 mean_var=118.9215+/-23.896, 0's: 0 Z-trim(110.6): 9 B-trim: 118 in 1/51 Lambda= 0.117610 statistics sampled from 11707 (11712) to 11707 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.36), width: 16 Scan time: 4.210 The best scores are: opt bits E(32554) CCDS80.1 NOL9 gene_id:79707|Hs108|chr1 ( 702) 4751 817.4 0 >>CCDS80.1 NOL9 gene_id:79707|Hs108|chr1 (702 aa) initn: 4751 init1: 4751 opt: 4751 Z-score: 4360.8 bits: 817.4 E(32554): 0 Smith-Waterman score: 4751; 99.6% identity (99.7% similar) in 702 aa overlap (1-702:1-702) 10 20 30 40 50 60 pF1KE5 MADSGLLLKWGSCRSTWLRVRKARPQLILSRRPRRRLGSLRWCGRRRLRRRLLQAQAAGV ::::::::: ::::::::::::::::::::::::::::::::::::::: :::::::.:: CCDS80 MADSGLLLKRGSCRSTWLRVRKARPQLILSRRPRRRLGSLRWCGRRRLRWRLLQAQASGV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 DWREGARQVSRAAAARRPNTATPSPIPSPTPASEPESEPELESASSCHRPLLIPPVRPVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 DWREGARQVSRAAAARRPNTATPSPIPSPTPASEPESEPELESASSCHRPLLIPPVRPVG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PGRALLLLPVEQGFTFSGICRVTCLYGQVQVFGFTISQGQPAQDIFSVYTHSCLSIHALH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 PGRALLLLPVEQGFTFSGICRVTCLYGQVQVFGFTISQGQPAQDIFSVYTHSCLSIHALH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 YSQPEKSKKELKREARNLLKSHLNLDDRRWSMQNFSPQCSIVLLEHLKTATVNFITSYPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 YSQPEKSKKELKREARNLLKSHLNLDDRRWSMQNFSPQCSIVLLEHLKTATVNFITSYPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 SSYIFVQESPTPQIKPEYLALRSVGIRREKKRKGLQLTESTLSALEELVNVSCEEVDGCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 SSYIFVQESPTPQIKPEYLALRSVGIRREKKRKGLQLTESTLSALEELVNVSCEEVDGCP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 VILVCGSQDVGKSTFNRYLINHLLNSLPCVDYLECDLGQTEFTPPGCISLLNITEPVLGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 VILVCGSQDVGKSTFNRYLINHLLNSLPCVDYLECDLGQTEFTPPGCISLLNITEPVLGP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 PFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKRESPLIVNTMGWVSDQGLLLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 PFTHLRTPQKMVYYGKPSCKNNYENYIDIVKYVFSAYKRESPLIVNTMGWVSDQGLLLLI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 DLIRLLSPSHVVQFRSDHSKYMPDLTPQYVDDMDGLYTKSKTKMRNRRFRLAAFADALEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 DLIRLLSPSHVVQFRSDHSKYMPDLTPQYVDDMDGLYTKSKTKMRNRRFRLAAFADALEF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 ADEEKESPVEFTGHKLIGVYTDFAFRITPRNRESHNKILRDLSILSYLSQLQPPMPKPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 ADEEKESPVEFTGHKLIGVYTDFAFRITPRNRESHNKILRDLSILSYLSQLQPPMPKPLS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 PLHSLTPYQVPFNAVALRITHSDVAPTHILYAVNASWVGLCKIQDDVRGYTNGPILLAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 PLHSLTPYQVPFNAVALRITHSDVAPTHILYAVNASWVGLCKIQDDVRGYTNGPILLAQT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 PICDCLGFGICRGIDMEKRLYHILTPVPPEELRTVNCLLVGAIAIPHCVLKCQRGIEGTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 PICDCLGFGICRGIDMEKRLYHILTPVPPEELRTVNCLLVGAIAIPHCVLKCQRGIEGTV 610 620 630 640 650 660 670 680 690 700 pF1KE5 PYVTTDYNFKLPGASEKIGAREPEEAHKEKPYRRPKFCRKMK :::::::::::::::::::::::::::::::::::::::::: CCDS80 PYVTTDYNFKLPGASEKIGAREPEEAHKEKPYRRPKFCRKMK 670 680 690 700 702 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:16:26 2016 done: Tue Nov 8 06:16:27 2016 Total Scan time: 4.210 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]