FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4173, 634 aa 1>>>pF1KE4173 634 - 634 aa - 634 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1228+/-0.000368; mu= 12.8480+/- 0.023 mean_var=159.2043+/-32.662, 0's: 0 Z-trim(118.2): 133 B-trim: 16 in 1/56 Lambda= 0.101648 statistics sampled from 30824 (30970) to 30824 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.363), width: 16 Scan time: 12.180 The best scores are: opt bits E(85289) NP_997279 (OMIM: 616923) RING finger protein 207 [ ( 634) 4290 641.4 2.8e-183 XP_011539741 (OMIM: 616923) PREDICTED: RING finger ( 682) 3491 524.3 5.6e-148 XP_016856748 (OMIM: 616923) PREDICTED: RING finger ( 656) 3352 503.9 7.5e-142 NP_443210 (OMIM: 606555) E3 ubiquitin-protein liga ( 550) 315 58.4 7.7e-08 XP_016876439 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 593) 315 58.5 8.1e-08 XP_016876438 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 611) 315 58.5 8.3e-08 XP_016876437 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 688) 315 58.5 9e-08 XP_016876436 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 692) 315 58.5 9.1e-08 XP_016876435 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 706) 315 58.5 9.2e-08 XP_016876434 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 710) 315 58.5 9.2e-08 NP_055978 (OMIM: 606555) E3 ubiquitin-protein liga ( 710) 315 58.5 9.2e-08 XP_005267359 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 714) 315 58.5 9.3e-08 XP_016876433 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 732) 315 58.5 9.5e-08 XP_005267358 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 777) 315 58.6 9.9e-08 XP_016876432 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 791) 315 58.6 1e-07 XP_006720081 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 795) 315 58.6 1e-07 XP_011534691 (OMIM: 606555) PREDICTED: E3 ubiquiti ( 802) 315 58.6 1e-07 NP_005753 (OMIM: 601742) transcription intermediar ( 835) 292 55.2 1.1e-06 NP_112223 (OMIM: 616996) E3 ubiquitin-protein liga ( 755) 216 44.0 0.0023 XP_011514891 (OMIM: 616996) PREDICTED: E3 ubiquiti ( 755) 216 44.0 0.0023 NP_001332879 (OMIM: 606125) probable E3 ubiquitin- ( 519) 204 42.1 0.0059 >>NP_997279 (OMIM: 616923) RING finger protein 207 [Homo (634 aa) initn: 4290 init1: 4290 opt: 4290 Z-score: 3411.3 bits: 641.4 E(85289): 2.8e-183 Smith-Waterman score: 4290; 100.0% identity (100.0% similar) in 634 aa overlap (1-634:1-634) 10 20 30 40 50 60 pF1KE4 MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 EHASLEGMRVVFQEIWEEAYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 EHASLEGMRVVFQEIWEEAYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 IAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_997 IAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWA 550 560 570 580 590 600 610 620 630 pF1KE4 PNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT :::::::::::::::::::::::::::::::::: NP_997 PNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT 610 620 630 >>XP_011539741 (OMIM: 616923) PREDICTED: RING finger pro (682 aa) initn: 3491 init1: 3491 opt: 3491 Z-score: 2777.6 bits: 524.3 E(85289): 5.6e-148 Smith-Waterman score: 3491; 100.0% identity (100.0% similar) in 526 aa overlap (109-634:157-682) 80 90 100 110 120 130 pF1KE4 DRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARMFA :::::::::::::::::::::::::::::: XP_011 PVSSGLFPRLLCRLPAWPRDRRPPHLPAVPDVETTYFCNTCGQPLCARCRDETHRARMFA 130 140 150 160 170 180 140 150 160 170 180 190 pF1KE4 RHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAYV 190 200 210 220 230 240 200 210 220 230 240 250 pF1KE4 QGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAERK 250 260 270 280 290 300 260 270 280 290 300 310 pF1KE4 ALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYELME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYELME 310 320 330 340 350 360 320 330 340 350 360 370 pF1KE4 RLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLGPK 370 380 390 400 410 420 380 390 400 410 420 430 pF1KE4 ALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPFAEHCRHYEDSYRHLQAEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPFAEHCRHYEDSYRHLQAEM 430 440 450 460 470 480 440 450 460 470 480 490 pF1KE4 QSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIASEHASLEGMRVVFQEIWEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIASEHASLEGMRVVFQEIWEE 490 500 510 520 530 540 500 510 520 530 540 550 pF1KE4 AYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRSIAKVKERLEPRFQAPVDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AYQRVANEQEIYEAQLHDLLQLRQENAYLTTITKQITPYVRSIAKVKERLEPRFQAPVDE 550 560 570 580 590 600 560 570 580 590 600 610 pF1KE4 QSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWAPNGLSEEPLLKNMDHHRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QSESLQNTHDDSRNNAASARNNPGSVPEKREKTSEPKGNSWAPNGLSEEPLLKNMDHHRS 610 620 630 640 650 660 620 630 pF1KE4 KQKNGGDVPTWREHPT :::::::::::::::: XP_011 KQKNGGDVPTWREHPT 670 680 >>XP_016856748 (OMIM: 616923) PREDICTED: RING finger pro (656 aa) initn: 3383 init1: 3352 opt: 3352 Z-score: 2667.7 bits: 503.9 E(85289): 7.5e-142 Smith-Waterman score: 4236; 96.6% identity (96.6% similar) in 656 aa overlap (1-634:1-656) 10 20 30 40 50 60 pF1KE4 MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSGAIFGPLEGPSSLDAPSIHPLVCPLCHVQYERPCLLDCFHDFCAGCLRGRATDGRLTC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PLCQHQTVLKGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QPLCARCRDETHRARMFARHDIVALGQRSRDVPQKCTLHAEPYLLFSTDKKLLLCIRCFR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LSLANKAEFLDLGYELMERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VAAAASGANTLAGGLGPKALTGPHCPSPVGKMSGSPVQKPTLHRSISTKVLLAEGENTPF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AEHCRHYEDSYRHLQAEMQSLKDQVQELHRDLTKHHSLIKAEIMGDVLHKSLQLDVQIAS 430 440 450 460 470 480 490 500 510 pF1KE4 EHASLEGMRVVFQE----------------------IWEEAYQRVANEQEIYEAQLHDLL :::::::::::::: :::::::::::::::::::::::: XP_016 EHASLEGMRVVFQEVALPRTLTPAPPVRGYLGYPKTIWEEAYQRVANEQEIYEAQLHDLL 490 500 510 520 530 540 520 530 540 550 560 570 pF1KE4 QLRQENAYLTTITKQITPYVRSIAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QLRQENAYLTTITKQITPYVRSIAKVKERLEPRFQAPVDEQSESLQNTHDDSRNNAASAR 550 560 570 580 590 600 580 590 600 610 620 630 pF1KE4 NNPGSVPEKREKTSEPKGNSWAPNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NNPGSVPEKREKTSEPKGNSWAPNGLSEEPLLKNMDHHRSKQKNGGDVPTWREHPT 610 620 630 640 650 >>NP_443210 (OMIM: 606555) E3 ubiquitin-protein ligase T (550 aa) initn: 233 init1: 143 opt: 315 Z-score: 261.7 bits: 58.4 E(85289): 7.7e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . NP_443 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: NP_443 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. NP_443 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . NP_443 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : NP_443 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. NP_443 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLE 390 400 410 420 430 440 >>XP_016876439 (OMIM: 606555) PREDICTED: E3 ubiquitin-pr (593 aa) initn: 233 init1: 143 opt: 315 Z-score: 261.3 bits: 58.5 E(85289): 8.1e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . XP_016 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: XP_016 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. XP_016 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . XP_016 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : XP_016 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. XP_016 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKVAWFAFDPGSAHSD 390 400 410 420 430 440 >>XP_016876438 (OMIM: 606555) PREDICTED: E3 ubiquitin-pr (611 aa) initn: 233 init1: 143 opt: 315 Z-score: 261.2 bits: 58.5 E(85289): 8.3e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . XP_016 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: XP_016 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. XP_016 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . XP_016 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : XP_016 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. XP_016 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKVAWFAFDPGSAHSD 390 400 410 420 430 440 >>XP_016876437 (OMIM: 606555) PREDICTED: E3 ubiquitin-pr (688 aa) initn: 233 init1: 143 opt: 315 Z-score: 260.5 bits: 58.5 E(85289): 9e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . XP_016 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: XP_016 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. XP_016 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . XP_016 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : XP_016 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. XP_016 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKVPATPILQLEECCT 390 400 410 420 430 440 >>XP_016876436 (OMIM: 606555) PREDICTED: E3 ubiquitin-pr (692 aa) initn: 233 init1: 143 opt: 315 Z-score: 260.5 bits: 58.5 E(85289): 9.1e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . XP_016 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: XP_016 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. XP_016 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . XP_016 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : XP_016 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. XP_016 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLE 390 400 410 420 430 440 >>XP_016876435 (OMIM: 606555) PREDICTED: E3 ubiquitin-pr (706 aa) initn: 233 init1: 143 opt: 315 Z-score: 260.3 bits: 58.5 E(85289): 9.2e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . XP_016 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: XP_016 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. XP_016 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . XP_016 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : XP_016 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. XP_016 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKVPATPILQLEECCT 390 400 410 420 430 440 >>XP_016876434 (OMIM: 606555) PREDICTED: E3 ubiquitin-pr (710 aa) initn: 233 init1: 143 opt: 315 Z-score: 260.3 bits: 58.5 E(85289): 9.2e-08 Smith-Waterman score: 315; 26.9% identity (59.6% similar) in 275 aa overlap (58-321:126-394) 30 40 50 60 70 80 pF1KE4 CHVQYERPCLLDCFHDFCAGCLRGRATDGRLTCPLCQHQTVL--KGPSGLPPVDRLLQFL .::: :... .: .: :.: .:.:. . XP_016 PNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPK-NRVLEGV 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE4 VDSSGDGVEAVRCANCDLECSEQDVETTYFCNTCGQPLCARCRDETHRARM-FARHDIV- .: .. :. .:.: : . :.: .:. : : :: . : : .:.: .: XP_016 IDRYQQSKAAA--LKCQL-CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVP 160 170 180 190 200 210 150 160 170 180 190 pF1KE4 -ALGQRSRDV-PQK---CTLHA-EPYLLFSTDKKLLLCIRCFRDMQKESRAHCVDLESAY : :. :: . :.: :: : : . .. .. :. .: .:... .. : : : .:. XP_016 PAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSS--HEVKALGAM 220 230 240 250 260 200 210 220 230 240 250 pF1KE4 VQGCE-RLEQAVLAVKALQTATREAIALLQAMVEEVRHSAAEEEDAIHALFGSMQDRLAE . . .: ::. ... ..: .. :. ::........: : . : .. : : . XP_016 WKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNR 270 280 290 300 310 320 260 270 280 290 300 310 pF1KE4 RKALLLQAVQSQYEEKDKAFKEQLSHLATLLPTLQVHLVICSSFLSLANKAEFLDLGYEL ::: :: :....:.: :. ..:.:: .. : . : .. . . ::... : XP_016 RKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDAL 330 340 350 360 370 380 320 330 340 350 360 370 pF1KE4 MERLQGIVTRPHHLRPIQSSKIASDHRAEFARCLEPLLLLGPRRVAAAASGANTLAGGLG ..:.. XP_016 IRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLE 390 400 410 420 430 440 634 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:34:36 2016 done: Sun Nov 6 03:34:38 2016 Total Scan time: 12.180 Total Display time: 0.120 Function used was FASTA [36.3.4 Apr, 2011]