FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6692, 329 aa 1>>>pF1KE6692 329 - 329 aa - 329 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3547+/-0.000266; mu= 17.8884+/- 0.017 mean_var=87.0033+/-17.500, 0's: 0 Z-trim(121.2): 75 B-trim: 1916 in 1/54 Lambda= 0.137501 statistics sampled from 37387 (37463) to 37387 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.439), width: 16 Scan time: 7.440 The best scores are: opt bits E(85289) NP_542172 (OMIM: 271640,615291,615349) beta-1,3-ga ( 329) 2257 456.8 2.9e-128 NP_689703 (OMIM: 610194,615181) UDP-GalNAc:beta-1, ( 500) 296 67.9 5e-11 XP_016855883 (OMIM: 610194,615181) PREDICTED: UDP- ( 541) 296 67.9 5.3e-11 XP_011525236 (OMIM: 615357) PREDICTED: UDP-GlcNAc: ( 397) 290 66.6 9.7e-11 NP_940942 (OMIM: 615357) UDP-GlcNAc:betaGal beta-1 ( 397) 290 66.6 9.7e-11 XP_006711812 (OMIM: 610194,615181) PREDICTED: UDP- ( 586) 286 66.0 2.2e-10 XP_011525928 (OMIM: 605863) PREDICTED: N-acetyllac ( 372) 276 63.8 6.3e-10 NP_055071 (OMIM: 605863) N-acetyllactosaminide bet ( 372) 276 63.8 6.3e-10 XP_005247010 (OMIM: 615313) PREDICTED: UDP-GlcNAc: ( 328) 274 63.4 7.6e-10 NP_660279 (OMIM: 615313) UDP-GlcNAc:betaGal beta-1 ( 401) 274 63.5 8.8e-10 XP_016883718 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883716 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883723 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883727 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883725 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 NP_006048 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 264 61.4 2.9e-09 XP_016883730 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883717 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 NP_149360 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 264 61.4 2.9e-09 XP_016883719 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883720 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883728 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883722 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 NP_001265579 (OMIM: 604066) beta-1,3-galactosyltra ( 310) 264 61.4 2.9e-09 XP_016883721 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883724 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 XP_016883726 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 NP_149361 (OMIM: 604066) beta-1,3-galactosyltransf ( 310) 264 61.4 2.9e-09 XP_016883729 (OMIM: 604066) PREDICTED: beta-1,3-ga ( 310) 264 61.4 2.9e-09 NP_149362 (OMIM: 604066) beta-1,3-galactosyltransf ( 314) 264 61.4 2.9e-09 NP_066191 (OMIM: 603093) beta-1,3-galactosyltransf ( 326) 257 60.0 7.8e-09 XP_006712882 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 257 60.0 7.8e-09 XP_005246988 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 257 60.0 7.8e-09 XP_011510387 (OMIM: 603093) PREDICTED: beta-1,3-ga ( 326) 257 60.0 7.8e-09 NP_003774 (OMIM: 603018) beta-1,3-galactosyltransf ( 422) 251 58.9 2.2e-08 NP_619651 (OMIM: 615315) acetylgalactosaminyl-O-gl ( 384) 249 58.5 2.7e-08 NP_003773 (OMIM: 603095) beta-1,3-galactosyltransf ( 378) 236 55.9 1.6e-07 NP_001317421 (OMIM: 605864) N-acetyllactosaminide ( 353) 218 52.3 1.8e-06 NP_110392 (OMIM: 605864) N-acetyllactosaminide bet ( 378) 218 52.3 1.9e-06 NP_001306004 (OMIM: 605581) N-acetyllactosaminide ( 397) 216 52.0 2.5e-06 NP_006568 (OMIM: 605581) N-acetyllactosaminide bet ( 397) 216 52.0 2.5e-06 NP_149359 (OMIM: 111400,603094,615021) UDP-GalNAc: ( 331) 211 50.9 4.4e-06 XP_005247921 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_006713866 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_006713868 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_016862894 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_016862897 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_005247916 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_016862898 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 XP_005247918 (OMIM: 111400,603094,615021) PREDICTE ( 331) 211 50.9 4.4e-06 >>NP_542172 (OMIM: 271640,615291,615349) beta-1,3-galact (329 aa) initn: 2257 init1: 2257 opt: 2257 Z-score: 2423.7 bits: 456.8 E(85289): 2.9e-128 Smith-Waterman score: 2257; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_542 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_542 VLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_542 LLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_542 LYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 EDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_542 EDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLC 250 260 270 280 290 300 310 320 pF1KE6 KREVQLRLSYVYDWSAPPSQCCQRREGIP ::::::::::::::::::::::::::::: NP_542 KREVQLRLSYVYDWSAPPSQCCQRREGIP 310 320 >>NP_689703 (OMIM: 610194,615181) UDP-GalNAc:beta-1,3-N- (500 aa) initn: 298 init1: 125 opt: 296 Z-score: 318.9 bits: 67.9 E(85289): 5e-11 Smith-Waterman score: 296; 28.3% identity (59.6% similar) in 198 aa overlap (104-301:305-496) 80 90 100 110 120 130 pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT :: :..:.. . :.... .. :.:.:. NP_689 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP 280 290 300 310 320 330 140 150 160 170 180 190 pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK ::.: . : : ..:...::.::: . :.:.. .. ... ..:: : : NP_689 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD 340 350 360 370 380 390 200 210 220 230 240 250 pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD :.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: . NP_689 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG 400 410 420 430 440 450 260 270 280 290 300 310 pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD .: .: . : . : . .: . . : .. : : : :. NP_689 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR 460 470 480 490 500 320 pF1KE6 WSAPPSQCCQRREGIP >>XP_016855883 (OMIM: 610194,615181) PREDICTED: UDP-GalN (541 aa) initn: 277 init1: 125 opt: 296 Z-score: 318.4 bits: 67.9 E(85289): 5.3e-11 Smith-Waterman score: 296; 28.3% identity (59.6% similar) in 198 aa overlap (104-301:346-537) 80 90 100 110 120 130 pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT :: :..:.. . :.... .. :.:.:. XP_016 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP 320 330 340 350 360 370 140 150 160 170 180 190 pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK ::.: . : : ..:...::.::: . :.:.. .. ... ..:: : : XP_016 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD 380 390 400 410 420 430 200 210 220 230 240 250 pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD :.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: . XP_016 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG 440 450 460 470 480 490 260 270 280 290 300 310 pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD .: .: . : . : . .: . . : .. : : : :. XP_016 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR 500 510 520 530 540 320 pF1KE6 WSAPPSQCCQRREGIP >>XP_011525236 (OMIM: 615357) PREDICTED: UDP-GlcNAc:beta (397 aa) initn: 272 init1: 120 opt: 290 Z-score: 313.8 bits: 66.6 E(85289): 9.7e-11 Smith-Waterman score: 290; 33.1% identity (51.7% similar) in 269 aa overlap (6-266:95-358) 10 20 30 pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAE .:: :: . .: : . :: XP_011 TIPLPFAYWNQQQWRLGSLPSGDSTETGGCQAWGAAAATEIPDFASYPKDLRRFLLSAAC 70 80 90 100 110 120 40 50 60 70 80 90 pF1KE6 PGDPRAM--SGRSPPPPAPARAAAFLAVLVASAP-RAAERRSVIRSTWLARRGAPGDVWA . :. . .: : . .: . : : : : :::..: : :: . ::: . XP_011 RSFPQWLPGGGGSQVSSCSDTDVPYLLLAVKSEPGRFAERQAV-RETWGS--PAPG-IRL 130 140 150 160 170 180 100 110 120 130 140 pF1KE6 RFAVGT-AG-LGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHV-AF : .:. .: : . . :. :..:::: : :. : : : : .:::: .: . XP_011 LFLLGSPVGEAGPDLDSLVAWESRRYSDLLLWDFL-DVPFNQTLKDLLLLAWLGRHCPTV 190 200 210 220 230 150 160 170 180 190 200 pF1KE6 EFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FFSGRGRVKPGGRWREAAWQLCD :::.:.::.:.. ::::.::: :: : :: : : .. :::: . . XP_011 SFVLRAQDDAFVHTPALLAHLRALPPASARSLYLGEVFTQAMPLRKPGGPFYVPESFFEG 240 250 260 270 280 290 210 220 230 240 250 260 pF1KE6 YYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYR : :: :::::... :. .: . . . ::: : . . . . : : : . XP_011 GYPAYASGGGYVIAGRLAPWLLRAAARVAPFPFEDVYTGLCIRALGLVPQAHPGFLTAWP 300 310 320 330 340 350 270 280 290 300 310 320 pF1KE6 SRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREG XP_011 ADRTADHCAFRNLLLVRPLGPQASIRLWKQLQDPRLQC 360 370 380 390 >>NP_940942 (OMIM: 615357) UDP-GlcNAc:betaGal beta-1,3-N (397 aa) initn: 272 init1: 120 opt: 290 Z-score: 313.8 bits: 66.6 E(85289): 9.7e-11 Smith-Waterman score: 290; 33.1% identity (51.7% similar) in 269 aa overlap (6-266:95-358) 10 20 30 pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAE .:: :: . .: : . :: NP_940 TIPLPFAYWNQQQWRLGSLPSGDSTETGGCQAWGAAAATEIPDFASYPKDLRRFLLSAAC 70 80 90 100 110 120 40 50 60 70 80 90 pF1KE6 PGDPRAM--SGRSPPPPAPARAAAFLAVLVASAP-RAAERRSVIRSTWLARRGAPGDVWA . :. . .: : . .: . : : : : :::..: : :: . ::: . NP_940 RSFPQWLPGGGGSQVSSCSDTDVPYLLLAVKSEPGRFAERQAV-RETWGS--PAPG-IRL 130 140 150 160 170 180 100 110 120 130 140 pF1KE6 RFAVGT-AG-LGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHV-AF : .:. .: : . . :. :..:::: : :. : : : : .:::: .: . NP_940 LFLLGSPVGEAGPDLDSLVAWESRRYSDLLLWDFL-DVPFNQTLKDLLLLAWLGRHCPTV 190 200 210 220 230 150 160 170 180 190 200 pF1KE6 EFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FFSGRGRVKPGGRWREAAWQLCD :::.:.::.:.. ::::.::: :: : :: : : .. :::: . . NP_940 SFVLRAQDDAFVHTPALLAHLRALPPASARSLYLGEVFTQAMPLRKPGGPFYVPESFFEG 240 250 260 270 280 290 210 220 230 240 250 260 pF1KE6 YYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYR : :: :::::... :. .: . . . ::: : . . . . : : : . NP_940 GYPAYASGGGYVIAGRLAPWLLRAAARVAPFPFEDVYTGLCIRALGLVPQAHPGFLTAWP 300 310 320 330 340 350 270 280 290 300 310 320 pF1KE6 SRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREG NP_940 ADRTADHCAFRNLLLVRPLGPQASIRLWKQLQDPRLQC 360 370 380 390 >>XP_006711812 (OMIM: 610194,615181) PREDICTED: UDP-GalN (586 aa) initn: 311 init1: 125 opt: 286 Z-score: 307.3 bits: 66.0 E(85289): 2.2e-10 Smith-Waterman score: 286; 28.6% identity (61.6% similar) in 185 aa overlap (104-288:305-483) 80 90 100 110 120 130 pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT :: :..:.. . :.... .. :.:.:. XP_006 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP 280 290 300 310 320 330 140 150 160 170 180 190 pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK ::.: . : : ..:...::.::: . :.:.. .. ... ..:: : : XP_006 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD 340 350 360 370 380 390 200 210 220 230 240 250 pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD :.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: . XP_006 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG 400 410 420 430 440 450 260 270 280 290 300 310 pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD .: .: . : . : . .: . . : .. : XP_006 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCPDSKLAREDCLQILQMF 460 470 480 490 500 320 pF1KE6 WSAPPSQCCQRREGIP XP_006 SPSVTFGNSSLSALTETWCHLRHDPQDTSHVSTRPCSARLGAQYHTANQFLGLDHSLHRR 510 520 530 540 550 560 >>XP_011525928 (OMIM: 605863) PREDICTED: N-acetyllactosa (372 aa) initn: 233 init1: 105 opt: 276 Z-score: 299.2 bits: 63.8 E(85289): 6.3e-10 Smith-Waterman score: 276; 33.0% identity (56.5% similar) in 209 aa overlap (49-246:99-301) 20 30 40 50 60 70 pF1KE6 LALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRS ::. .:: ... :.: :: ..: XP_011 THPDFATQPQHVQNFLLYRHCRHFPLLQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRR 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE6 TWLARRGAPG-DVWARFAVGTAGLGAEER---RALEREQARHGDLLLLPALRDAYENLTA :: .: . : .. : ::::. : : : :: : :::.: ..:.. ::: XP_011 TWGRERKVRGLQLRLLFLVGTASNPHEARKVNRLLELEAQTHGDILQWD-FHDSFFNLTL 130 140 150 160 170 180 140 150 160 170 180 190 pF1KE6 KVLAMLAWLDEHVA-FEFVLKADDDSFARLDALLAELRAREPARRRRLYWG-FFSGRGRV : . .: : . . : :::..::: ::. : .. :. ..:.:. :. : .... : . XP_011 KQVLFLQWQETRCANASFVLNGDDDVFAHTDNMVFYLQDHDPGRH--LFVGQLIQNVGPI 190 200 210 220 230 240 200 210 220 230 240 pF1KE6 KPGGRWR-----EAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGA . . : :.. : . : :: :::..:: . :: . : . .:: :: XP_011 R--AFWSKYYVPEVVTQ-NERYPPYCGGGGFLLSRFTAAALRRAAHVLDIFPIDDVFLGM 250 260 270 280 290 300 250 260 270 280 290 300 pF1KE6 WLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLR XP_011 CLELEGLKPASHSGIRTSGVRAPSQRLSSFDPCFYRDLLLVHRFLPYEMLLMWDALNQPN 310 320 330 340 350 360 >>NP_055071 (OMIM: 605863) N-acetyllactosaminide beta-1, (372 aa) initn: 233 init1: 105 opt: 276 Z-score: 299.2 bits: 63.8 E(85289): 6.3e-10 Smith-Waterman score: 276; 33.0% identity (56.5% similar) in 209 aa overlap (49-246:99-301) 20 30 40 50 60 70 pF1KE6 LALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRS ::. .:: ... :.: :: ..: NP_055 THPDFATQPQHVQNFLLYRHCRHFPLLQDVPPSKCAQPVFLLLVIKSSPSNYVRRELLRR 70 80 90 100 110 120 80 90 100 110 120 130 pF1KE6 TWLARRGAPG-DVWARFAVGTAGLGAEER---RALEREQARHGDLLLLPALRDAYENLTA :: .: . : .. : ::::. : : : :: : :::.: ..:.. ::: NP_055 TWGRERKVRGLQLRLLFLVGTASNPHEARKVNRLLELEAQTHGDILQWD-FHDSFFNLTL 130 140 150 160 170 180 140 150 160 170 180 190 pF1KE6 KVLAMLAWLDEHVA-FEFVLKADDDSFARLDALLAELRAREPARRRRLYWG-FFSGRGRV : . .: : . . : :::..::: ::. : .. :. ..:.:. :. : .... : . NP_055 KQVLFLQWQETRCANASFVLNGDDDVFAHTDNMVFYLQDHDPGRH--LFVGQLIQNVGPI 190 200 210 220 230 240 200 210 220 230 240 pF1KE6 KPGGRWR-----EAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGA . . : :.. : . : :: :::..:: . :: . : . .:: :: NP_055 R--AFWSKYYVPEVVTQ-NERYPPYCGGGGFLLSRFTAAALRRAAHVLDIFPIDDVFLGM 250 260 270 280 290 300 250 260 270 280 290 300 pF1KE6 WLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLR NP_055 CLELEGLKPASHSGIRTSGVRAPSQRLSSFDPCFYRDLLLVHRFLPYEMLLMWDALNQPN 310 320 330 340 350 360 >>XP_005247010 (OMIM: 615313) PREDICTED: UDP-GlcNAc:beta (328 aa) initn: 232 init1: 100 opt: 274 Z-score: 297.7 bits: 63.4 E(85289): 7.6e-10 Smith-Waterman score: 276; 31.7% identity (53.4% similar) in 281 aa overlap (50-306:54-327) 20 30 40 50 60 70 pF1KE6 ALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRST : :. ..: :.: :. .:: .::.: XP_005 HQPWFQVLEPQFRQFLFYRHCRYFPMLLNHPEKCRGDVYLLVVVKSVITQHDRREAIRQT 30 40 50 60 70 80 80 90 100 110 120 130 pF1KE6 WLARR----GAPGDVWARFAVGTAGLGAEER----RALEREQARHGDLLLLPALRDAYEN : .: :. : : . : .:::. ::: . : :. .::.: : :.. : XP_005 WGRERQSAGGGRGAVRTLFLLGTAS-KQEERTHYQQLLAYEDRLYGDILQWGFL-DTFFN 90 100 110 120 130 140 140 150 160 170 180 pF1KE6 LTAKVLAMLAWLD---EHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FF :: : . .: ::: :: : ..:.::: :. :: : :.: .. :. : . XP_005 LTLKEIHFLKWLDIYCPHVPF--IFKGDDDVFVNPTNLLEFLADRQP--QENLFVGDVLQ 150 160 170 180 190 190 200 210 220 230 240 pF1KE6 SGRG-RVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSL .: : : . . .: : ::: :::......:.. :. . : :. . .:: : XP_005 HARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAGSLARRLHHACDTLELYPIDDVFL 200 210 220 230 240 250 250 260 270 280 290 pF1KE6 GAWLAPVDVQREHDPRFDTEYRSRGCSNQY----------LVTHKQSLEDMLEKHATLAR : : . :: : : ::. .... ::.:: : : :.. XP_005 GMCLEVLGVQPTAHEGFKTFGISRNRNSRMNKEPCFFRAMLVVHKL-LPPELLAMWGLVH 260 270 280 290 300 310 300 310 320 pF1KE6 EGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP . :.:..:. XP_005 SNLTCSRKLQVL 320 >>NP_660279 (OMIM: 615313) UDP-GlcNAc:betaGal beta-1,3-N (401 aa) initn: 261 init1: 100 opt: 274 Z-score: 296.6 bits: 63.5 E(85289): 8.8e-10 Smith-Waterman score: 276; 31.7% identity (53.4% similar) in 281 aa overlap (50-306:127-400) 20 30 40 50 60 70 pF1KE6 ALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRST : :. ..: :.: :. .:: .::.: NP_660 HQPWFQVLEPQFRQFLFYRHCRYFPMLLNHPEKCRGDVYLLVVVKSVITQHDRREAIRQT 100 110 120 130 140 150 80 90 100 110 120 130 pF1KE6 WLARR----GAPGDVWARFAVGTAGLGAEER----RALEREQARHGDLLLLPALRDAYEN : .: :. : : . : .:::. ::: . : :. .::.: : :.. : NP_660 WGRERQSAGGGRGAVRTLFLLGTAS-KQEERTHYQQLLAYEDRLYGDILQWGFL-DTFFN 160 170 180 190 200 210 140 150 160 170 180 pF1KE6 LTAKVLAMLAWLD---EHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWG--FF :: : . .: ::: :: : ..:.::: :. :: : :.: .. :. : . NP_660 LTLKEIHFLKWLDIYCPHVPF--IFKGDDDVFVNPTNLLEFLADRQP--QENLFVGDVLQ 220 230 240 250 260 270 190 200 210 220 230 240 pF1KE6 SGRG-RVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSL .: : : . . .: : ::: :::......:.. :. . : :. . .:: : NP_660 HARPIRRKDNKYYIPGALYGKASYPPYAGGGGFLMAGSLARRLHHACDTLELYPIDDVFL 280 290 300 310 320 330 250 260 270 280 290 pF1KE6 GAWLAPVDVQREHDPRFDTEYRSRGCSNQY----------LVTHKQSLEDMLEKHATLAR : : . :: : : ::. .... ::.:: : : :.. NP_660 GMCLEVLGVQPTAHEGFKTFGISRNRNSRMNKEPCFFRAMLVVHKL-LPPELLAMWGLVH 340 350 360 370 380 300 310 320 pF1KE6 EGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP . :.:..:. NP_660 SNLTCSRKLQVL 390 400 329 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:27:28 2016 done: Tue Nov 8 15:27:30 2016 Total Scan time: 7.440 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]