FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6692, 329 aa 1>>>pF1KE6692 329 - 329 aa - 329 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9186+/-0.000616; mu= 14.8424+/- 0.038 mean_var=93.3828+/-18.563, 0's: 0 Z-trim(114.1): 20 B-trim: 0 in 0/51 Lambda= 0.132721 statistics sampled from 14630 (14648) to 14630 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.45), width: 16 Scan time: 2.250 The best scores are: opt bits E(32554) CCDS13.1 B3GALT6 gene_id:126792|Hs108|chr1 ( 329) 2257 441.5 4.5e-124 CCDS1606.1 B3GALNT2 gene_id:148789|Hs108|chr1 ( 500) 296 66.1 6.7e-11 >>CCDS13.1 B3GALT6 gene_id:126792|Hs108|chr1 (329 aa) initn: 2257 init1: 2257 opt: 2257 Z-score: 2341.0 bits: 441.5 E(32554): 4.5e-124 Smith-Waterman score: 2257; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE6 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MKLLRRAWRRRAALGLGTLALCGAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 VLVASAPRAAERRSVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 LLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 EDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 EDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLC 250 260 270 280 290 300 310 320 pF1KE6 KREVQLRLSYVYDWSAPPSQCCQRREGIP ::::::::::::::::::::::::::::: CCDS13 KREVQLRLSYVYDWSAPPSQCCQRREGIP 310 320 >>CCDS1606.1 B3GALNT2 gene_id:148789|Hs108|chr1 (500 aa) initn: 298 init1: 125 opt: 296 Z-score: 309.1 bits: 66.1 E(32554): 6.7e-11 Smith-Waterman score: 296; 28.3% identity (59.6% similar) in 198 aa overlap (104-301:305-496) 80 90 100 110 120 130 pF1KE6 SVIRSTWLARRGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLT :: :..:.. . :.... .. :.:.:. CCDS16 FIYTIQEGDALLHNLHSRPQRLIDHIRNLHEEDALLKEESSIYDDIVFVDVV-DTYRNVP 280 290 300 310 320 330 140 150 160 170 180 190 pF1KE6 AKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVK ::.: . : : ..:...::.::: . :.:.. .. ... ..:: : : CCDS16 AKLLNFYRWTVETTSFNLLLKTDDDCYIDLEAVFNRI-VQKNLDGPNFWWGNFRLNWAVD 340 350 360 370 380 390 200 210 220 230 240 250 pF1KE6 PGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVD :.:.: . : .: :.:::.: :.:..: . :.....::::.: :.: . CCDS16 RTGKWQELEYP-SPAYPAFACGSGYVISKDIVKWLASNSGRLKTYQGEDVSMGIWMAAIG 400 410 420 430 440 450 260 270 280 290 300 310 pF1KE6 VQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYD .: .: . : . : . .: . . : .. : : : :. CCDS16 PKRYQDSLWLCE---KTCETGMLSSPQYSPWELTELWKLKERCGDPCRCQAR 460 470 480 490 500 320 pF1KE6 WSAPPSQCCQRREGIP 329 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:27:28 2016 done: Tue Nov 8 15:27:28 2016 Total Scan time: 2.250 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]