Result of FASTA (omim) for
pFN21AE1768
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1768, 277 aa
1>>>pF1KE1768 277 - 277 aa - 277 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3339+/-0.000314; mu= 2.8072+/- 0.020
mean_var=203.5747+/-40.685, 0's: 0 Z-trim(124.4): 80 B-trim: 33 in 1/55
Lambda= 0.089890
statistics sampled from 45815 (45921) to 45815 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.833), E-opt: 0.2 (0.538), width: 16
Scan time: 8.450
The best scores are: opt bits E(85289)
NP_003318 (OMIM: 600315,615593) tumor necrosis fac ( 277) 2015 272.8 4.9e-73
XP_016857721 (OMIM: 600315,615593) PREDICTED: tumo ( 277) 2015 272.8 4.9e-73
XP_011540377 (OMIM: 600315,615593) PREDICTED: tumo ( 303) 1874 254.6 1.7e-67
XP_016857720 (OMIM: 600315,615593) PREDICTED: tumo ( 303) 1874 254.6 1.7e-67
XP_011540378 (OMIM: 600315,615593) PREDICTED: tumo ( 281) 1343 185.7 8.4e-47
XP_011540376 (OMIM: 600315,615593) PREDICTED: tumo ( 307) 1202 167.4 2.9e-41
XP_011540379 (OMIM: 600315,615593) PREDICTED: tumo ( 203) 953 135.0 1.1e-31
NP_002498 (OMIM: 162010) tumor necrosis factor rec ( 427) 304 51.1 4.2e-06
NP_683700 (OMIM: 603905) tumor necrosis factor rec ( 234) 235 41.9 0.0013
NP_004186 (OMIM: 603905) tumor necrosis factor rec ( 241) 235 41.9 0.0014
XP_016858211 (OMIM: 603905) PREDICTED: tumor necro ( 347) 235 42.1 0.0018
NP_001257916 (OMIM: 600979) tumor necrosis factor ( 416) 235 42.1 0.002
NP_001284534 (OMIM: 602746) tumor necrosis factor ( 184) 228 40.9 0.0021
NP_002333 (OMIM: 600979) tumor necrosis factor rec ( 435) 235 42.2 0.0021
XP_006711082 (OMIM: 602746) PREDICTED: tumor necro ( 197) 228 41.0 0.0022
NP_001233 (OMIM: 186711,615122) CD27 antigen precu ( 260) 228 41.1 0.0027
NP_003811 (OMIM: 602746) tumor necrosis factor rec ( 283) 228 41.1 0.0029
XP_006719046 (OMIM: 600979) PREDICTED: tumor necro ( 255) 227 40.9 0.0029
XP_016875723 (OMIM: 186711,615122) PREDICTED: CD27 ( 358) 228 41.2 0.0034
XP_016875721 (OMIM: 186711,615122) PREDICTED: CD27 ( 405) 228 41.2 0.0037
XP_016883625 (OMIM: 109535,606843) PREDICTED: tumo ( 289) 225 40.7 0.0038
NP_001289682 (OMIM: 109535,606843) tumor necrosis ( 237) 223 40.4 0.0039
XP_005253745 (OMIM: 600979) PREDICTED: tumor necro ( 399) 227 41.1 0.0041
XP_016883624 (OMIM: 109535,606843) PREDICTED: tumo ( 323) 223 40.5 0.005
NP_003814 (OMIM: 603361) tumor necrosis factor rec ( 300) 220 40.1 0.0061
NP_003832 (OMIM: 603613) tumor necrosis factor rec ( 259) 218 39.8 0.0066
NP_001257878 (OMIM: 174810,602080,603499,612301) t ( 263) 214 39.2 0.0095
>>NP_003318 (OMIM: 600315,615593) tumor necrosis factor (277 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1432.3 bits: 272.8 E(85289): 4.9e-73
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)
10 20 30 40 50 60
pF1KE1 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
190 200 210 220 230 240
250 260 270
pF1KE1 RRDQRLPPDAHKPPGGGSFRTPIQEEQADAHSTLAKI
:::::::::::::::::::::::::::::::::::::
NP_003 RRDQRLPPDAHKPPGGGSFRTPIQEEQADAHSTLAKI
250 260 270
>>XP_016857721 (OMIM: 600315,615593) PREDICTED: tumor ne (277 aa)
initn: 2015 init1: 2015 opt: 2015 Z-score: 1432.3 bits: 272.8 E(85289): 4.9e-73
Smith-Waterman score: 2015; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)
10 20 30 40 50 60
pF1KE1 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
190 200 210 220 230 240
250 260 270
pF1KE1 RRDQRLPPDAHKPPGGGSFRTPIQEEQADAHSTLAKI
:::::::::::::::::::::::::::::::::::::
XP_016 RRDQRLPPDAHKPPGGGSFRTPIQEEQADAHSTLAKI
250 260 270
>>XP_011540377 (OMIM: 600315,615593) PREDICTED: tumor ne (303 aa)
initn: 1874 init1: 1874 opt: 1874 Z-score: 1332.9 bits: 254.6 E(85289): 1.7e-67
Smith-Waterman score: 1953; 91.4% identity (91.4% similar) in 303 aa overlap (1-277:1-303)
10 20 30 40 50 60
pF1KE1 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
190 200 210 220 230 240
250 260 270
pF1KE1 RRDQRLPPDAHKPPG--------------------------GGSFRTPIQEEQADAHSTL
::::::::::::::: :::::::::::::::::::
XP_011 RRDQRLPPDAHKPPGECLMALPHCSWRVRPTHQSLLFSSPGGGSFRTPIQEEQADAHSTL
250 260 270 280 290 300
pF1KE1 AKI
:::
XP_011 AKI
>>XP_016857720 (OMIM: 600315,615593) PREDICTED: tumor ne (303 aa)
initn: 1874 init1: 1874 opt: 1874 Z-score: 1332.9 bits: 254.6 E(85289): 1.7e-67
Smith-Waterman score: 1953; 91.4% identity (91.4% similar) in 303 aa overlap (1-277:1-303)
10 20 30 40 50 60
pF1KE1 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRPGNGMVSRCSRSQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDSYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQETQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALYLL
190 200 210 220 230 240
250 260 270
pF1KE1 RRDQRLPPDAHKPPG--------------------------GGSFRTPIQEEQADAHSTL
::::::::::::::: :::::::::::::::::::
XP_016 RRDQRLPPDAHKPPGECLMALPHCSWRVRPTHQSLLFSSPGGGSFRTPIQEEQADAHSTL
250 260 270 280 290 300
pF1KE1 AKI
:::
XP_016 AKI
>>XP_011540378 (OMIM: 600315,615593) PREDICTED: tumor ne (281 aa)
initn: 1326 init1: 1326 opt: 1343 Z-score: 961.2 bits: 185.7 E(85289): 8.4e-47
Smith-Waterman score: 1343; 89.5% identity (90.9% similar) in 219 aa overlap (64-277:68-281)
40 50 60 70 80
pF1KE1 DTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSK-----PCKPCTWCN
: : : . .: : : : ::.
XP_011 PGASGAAGAPSLRGGRRPLPTALCVVGRPTCPPV-PTLPEDPVHSPHLTTPPSGPCS---
40 50 60 70 80 90
90 100 110 120 130 140
pF1KE1 LRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 -GSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCT
100 110 120 130 140 150
150 160 170 180 190 200
pF1KE1 LAGKHTLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAGKHTLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVE
160 170 180 190 200 210
210 220 230 240 250 260
pF1KE1 VPGGRAVAAILGLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPGGGSFRTPIQEEQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPGGRAVAAILGLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPGGGSFRTPIQEEQA
220 230 240 250 260 270
270
pF1KE1 DAHSTLAKI
:::::::::
XP_011 DAHSTLAKI
280
>>XP_011540376 (OMIM: 600315,615593) PREDICTED: tumor ne (307 aa)
initn: 1185 init1: 1185 opt: 1202 Z-score: 861.9 bits: 167.4 E(85289): 2.9e-41
Smith-Waterman score: 1281; 80.0% identity (81.2% similar) in 245 aa overlap (64-277:68-307)
40 50 60 70 80
pF1KE1 DTYPSNDRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSK-----PCKPCTWCN
: : : . .: : : : ::.
XP_011 PGASGAAGAPSLRGGRRPLPTALCVVGRPTCPPV-PTLPEDPVHSPHLTTPPSGPCS---
40 50 60 70 80 90
90 100 110 120 130 140
pF1KE1 LRSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 -GSGSERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCT
100 110 120 130 140 150
150 160 170 180 190 200
pF1KE1 LAGKHTLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAGKHTLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVE
160 170 180 190 200 210
210 220 230 240 250
pF1KE1 VPGGRAVAAILGLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPG-------------
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPGGRAVAAILGLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPGECLMALPHCSWRV
220 230 240 250 260 270
260 270
pF1KE1 -------------GGSFRTPIQEEQADAHSTLAKI
::::::::::::::::::::::
XP_011 RPTHQSLLFSSPGGGSFRTPIQEEQADAHSTLAKI
280 290 300
>>XP_011540379 (OMIM: 600315,615593) PREDICTED: tumor ne (203 aa)
initn: 975 init1: 953 opt: 953 Z-score: 689.8 bits: 135.0 E(85289): 1.1e-31
Smith-Waterman score: 1032; 85.6% identity (85.6% similar) in 180 aa overlap (124-277:24-203)
100 110 120 130 140 150
pF1KE1 ERKQLCTATQDTVCRCRAGTQPLDSYKPGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKH
::::::::::::::::::::::::::::::
XP_011 MGRGPQGPGPTGASSGILKTELPDCAPCPPGHFSPGDNQACKPWTNCTLAGKH
10 20 30 40 50
160 170 180 190 200 210
pF1KE1 TLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVEVPGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLQPASNSSDAICEDRDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVEVPGGR
60 70 80 90 100 110
220 230 240 250
pF1KE1 AVAAILGLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPG------------------
::::::::::::::::::::::::::::::::::::::::::
XP_011 AVAAILGLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPGECLMALPHCSWRVRPTHQ
120 130 140 150 160 170
260 270
pF1KE1 --------GGSFRTPIQEEQADAHSTLAKI
::::::::::::::::::::::
XP_011 SLLFSSPGGGSFRTPIQEEQADAHSTLAKI
180 190 200
>>NP_002498 (OMIM: 162010) tumor necrosis factor recepto (427 aa)
initn: 227 init1: 86 opt: 304 Z-score: 230.5 bits: 51.1 E(85289): 4.2e-06
Smith-Waterman score: 304; 32.7% identity (50.4% similar) in 248 aa overlap (3-229:1-237)
10 20 30 40 50
pF1KE1 MCVGARRLGR---GPCAALLLLGLGLSTVTGLH--CVGDTYPSNDRCCHECRPGNGMVSR
.:: :: :: :::: ::.: . : . : : . .::. : :.:...
NP_002 MGAGATGRAMDGP-RLLLLLLLGVS-LGGAKEACPTGLYTHSGECCKACNLGEGVAQP
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 CSRSQNTVCRPCGPGF-YNDVVS-SKPCKPCTWC-NLRSGSERKQLCTATQDTVCRCRAG
:. .: :::.:: . ..:::: ..:::::: : .:.: : :. ..:.:::: :
NP_002 CGANQ-TVCEPCLDSVTFSDVVSATEPCKPCTECVGLQSMSAP---CVEADDAVCRCAYG
60 70 80 90 100 110
120 130 140 150 160
pF1KE1 TQPLDSYKPGVDCAPCPPGH---FSPGDNQACKPWTNCTLAGKHTLQPASNSSD-----A
.. : : : :: :.: : : : . .: : .
NP_002 YYQDETTGRCEACRVCEAGSGLVFSCQDKQN----TVCEECPDGTYSDEANHVDPCLPCT
120 130 140 150 160
170 180 190 200 210
pF1KE1 ICED-----RDPPATQPQETQGPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAIL
.::: :. : . :.: :: . : : .:::. :.: . . :
NP_002 VCEDTERQLRECTRWADAECEEIPGRWIT-RSTPPEGSDSTAPSTQEPEAPPEQDLIAST
170 180 190 200 210 220
220 230 240 250 260 270
pF1KE1 GLGLVLGLLGPLAILLALYLLRRDQRLPPDAHKPPGGGSFRTPIQEEQADAHSTLAKI
:.: ..:
NP_002 VAGVVTTVMGSSQPVVTRGTTDNLIPVYCSILAAVVVGLVAYIAFKRWNSCKQNKQGANS
230 240 250 260 270 280
>>NP_683700 (OMIM: 603905) tumor necrosis factor recepto (234 aa)
initn: 220 init1: 195 opt: 235 Z-score: 185.7 bits: 41.9 E(85289): 0.0013
Smith-Waterman score: 235; 30.5% identity (53.2% similar) in 154 aa overlap (22-173:15-160)
10 20 30 40 50
pF1KE1 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRP--GNGMVSRCSR
::. . .: .:. :.. : : :.: .:: :
NP_683 MAQHGAMGAFRALCGLALLCALS-LGQR-PTGGPGCGPGRLLLGTGTDARCCR
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 SQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDS
..: : :: .. : : :. ... :. ::. . : :.: .
NP_683 VHTTRCCRDYPG--EECCSEWDCM-CVQPEFHCGDP---CCTTCRHHPCPPGQGVQSQGK
60 70 80 90 100
120 130 140 150 160 170
pF1KE1 YKPGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQE
.. : .: : : :: : . :::::.:: : :. :.... .:.: .:::
NP_683 FSFGFQCIDCASGTFSGGHEGHCKPWTDCTQFGFLTVFPGNKTHNAVCVPGSPPAEPLGW
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 TQGPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALY
NP_683 LTVVLLAVAACVLLLTSAQLGLHIWQLRKTQLLLEVPPSTEDARSCQFPEEERGERSAEE
170 180 190 200 210 220
>>NP_004186 (OMIM: 603905) tumor necrosis factor recepto (241 aa)
initn: 220 init1: 195 opt: 235 Z-score: 185.5 bits: 41.9 E(85289): 0.0014
Smith-Waterman score: 235; 30.5% identity (53.2% similar) in 154 aa overlap (22-173:15-160)
10 20 30 40 50
pF1KE1 MCVGARRLGRGPCAALLLLGLGLSTVTGLHCVGDTYPSNDRCCHECRP--GNGMVSRCSR
::. . .: .:. :.. : : :.: .:: :
NP_004 MAQHGAMGAFRALCGLALLCALS-LGQR-PTGGPGCGPGRLLLGTGTDARCCR
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 SQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCRCRAGTQPLDS
..: : :: .. : : :. ... :. ::. . : :.: .
NP_004 VHTTRCCRDYPG--EECCSEWDCM-CVQPEFHCGDP---CCTTCRHHPCPPGQGVQSQGK
60 70 80 90 100
120 130 140 150 160 170
pF1KE1 YKPGVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHTLQPASNSSDAICEDRDPPATQPQE
.. : .: : : :: : . :::::.:: : :. :.... .:.: .:::
NP_004 FSFGFQCIDCASGTFSGGHEGHCKPWTDCTQFGFLTVFPGNKTHNAVCVPGSPPAEPLGW
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE1 TQGPPARPITVQPTEAWPRTSQGPSTRPVEVPGGRAVAAILGLGLVLGLLGPLAILLALY
NP_004 LTVVLLAVAACVLLLTSAQLGLHIWQLRSQCMWPRETQLLLEVPPSTEDARSCQFPEEER
170 180 190 200 210 220
277 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 19:35:21 2016 done: Sun Nov 6 19:35:22 2016
Total Scan time: 8.450 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]