FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6690, 299 aa 1>>>pF1KE6690 299 - 299 aa - 299 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9775+/-0.000794; mu= 12.9892+/- 0.048 mean_var=86.5642+/-17.754, 0's: 0 Z-trim(109.3): 8 B-trim: 487 in 1/51 Lambda= 0.137849 statistics sampled from 10801 (10806) to 10801 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.332), width: 16 Scan time: 2.230 The best scores are: opt bits E(32554) CCDS8467.1 HYLS1 gene_id:219844|Hs108|chr11 ( 299) 2037 414.6 4.5e-116 >>CCDS8467.1 HYLS1 gene_id:219844|Hs108|chr11 (299 aa) initn: 2037 init1: 2037 opt: 2037 Z-score: 2197.4 bits: 414.6 E(32554): 4.5e-116 Smith-Waterman score: 2037; 100.0% identity (100.0% similar) in 299 aa overlap (1-299:1-299) 10 20 30 40 50 60 pF1KE6 MEELLPDGQIWANMDPEERMLAAATAFTHICAGQGEGDVRREAQSIQYDPYSKASVAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 MEELLPDGQIWANMDPEERMLAAATAFTHICAGQGEGDVRREAQSIQYDPYSKASVAPGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RPALPVQLQYPHVESNVPSETVSEASQRLRKPVMKRKVLRRKPDGEVLVTDESIISESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 RPALPVQLQYPHVESNVPSETVSEASQRLRKPVMKRKVLRRKPDGEVLVTDESIISESES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 GTENDQDLWDLRQRLMNVQFQEDKESSFDVSQKFNLPHEYQGISQDQLICSLQREGMGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 GTENDQDLWDLRQRLMNVQFQEDKESSFDVSQKFNLPHEYQGISQDQLICSLQREGMGSP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 AYEQDLIVASRPKSFILPKLDQLSRNRGKTDRVARYFEYKRDWDSIRLPGEDHRKELRWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 AYEQDLIVASRPKSFILPKLDQLSRNRGKTDRVARYFEYKRDWDSIRLPGEDHRKELRWG 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 VREQMLCRAEPQSKPQHIYVPNNYLVPTEKKRSALRWGVRCDLANGVIPRKLPFPLSPS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 VREQMLCRAEPQSKPQHIYVPNNYLVPTEKKRSALRWGVRCDLANGVIPRKLPFPLSPS 250 260 270 280 290 299 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:26:23 2016 done: Tue Nov 8 15:26:24 2016 Total Scan time: 2.230 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]