FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6504, 179 aa 1>>>pF1KE6504 179 - 179 aa - 179 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.7246+/-0.000855; mu= -3.0273+/- 0.052 mean_var=373.1956+/-77.160, 0's: 0 Z-trim(118.9): 11 B-trim: 194 in 1/52 Lambda= 0.066391 statistics sampled from 19997 (20008) to 19997 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.864), E-opt: 0.2 (0.615), width: 16 Scan time: 1.770 The best scores are: opt bits E(32554) CCDS5463.1 MPLKIP gene_id:136647|Hs108|chr7 ( 179) 1335 139.8 8.4e-34 >>CCDS5463.1 MPLKIP gene_id:136647|Hs108|chr7 (179 aa) initn: 1335 init1: 1335 opt: 1335 Z-score: 720.3 bits: 139.8 E(32554): 8.4e-34 Smith-Waterman score: 1335; 100.0% identity (100.0% similar) in 179 aa overlap (1-179:1-179) 10 20 30 40 50 60 pF1KE6 MQRQNFRPPTPPYPGPGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGSPHHTPPYGPRSRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MQRQNFRPPTPPYPGPGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGSPHHTPPYGPRSRP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YGSSHSPRHGGSFPGGRFGSPSPGGYPGSYSRSPAGSQQQFGYSPGQQQTHPQGSPRTST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 YGSSHSPRHGGSFPGGRFGSPSPGGYPGSYSRSPAGSQQQFGYSPGQQQTHPQGSPRTST 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 PFGSGRVREKRMSNELENYFKPSMLEDPWAGLEPVSVVDISQQYSNTQTFTGKKGRYFC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PFGSGRVREKRMSNELENYFKPSMLEDPWAGLEPVSVVDISQQYSNTQTFTGKKGRYFC 130 140 150 160 170 179 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:54:57 2016 done: Tue Nov 8 13:54:58 2016 Total Scan time: 1.770 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]