Result of FASTA (omim) for
pFN21AE6481
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6481, 513 aa
1>>>pF1KE6481 513 - 513 aa - 513 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0056+/-0.000436; mu= 19.6702+/- 0.027
mean_var=61.1915+/-12.179, 0's: 0 Z-trim(108.5): 35 B-trim: 43 in 2/56
Lambda= 0.163956
statistics sampled from 16562 (16576) to 16562 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.563), E-opt: 0.2 (0.194), width: 16
Scan time: 7.030
The best scores are: opt bits E(85289)
NP_001683 (OMIM: 192132,267300) V-type proton ATPa ( 513) 3386 810.1 0
XP_011531209 (OMIM: 192132,267300) PREDICTED: V-ty ( 553) 2994 717.4 2.7e-206
NP_001684 (OMIM: 124480,606939,616455) V-type prot ( 511) 2871 688.3 1.5e-197
NP_001001935 (OMIM: 164360,615228,616045) ATP synt ( 503) 393 102.1 4e-21
NP_001244264 (OMIM: 164360,615228,616045) ATP synt ( 503) 393 102.1 4e-21
NP_004037 (OMIM: 164360,615228,616045) ATP synthas ( 553) 393 102.1 4.3e-21
NP_001001937 (OMIM: 164360,615228,616045) ATP synt ( 553) 393 102.1 4.3e-21
XP_016881278 (OMIM: 164360,615228,616045) PREDICTE ( 586) 393 102.2 4.5e-21
NP_001677 (OMIM: 102910) ATP synthase subunit beta ( 529) 361 94.6 7.9e-19
NP_001244263 (OMIM: 164360,615228,616045) ATP synt ( 531) 311 82.7 2.9e-15
NP_001681 (OMIM: 607027) V-type proton ATPase cata ( 617) 289 77.6 1.2e-13
>>NP_001683 (OMIM: 192132,267300) V-type proton ATPase s (513 aa)
initn: 3386 init1: 3386 opt: 3386 Z-score: 4326.2 bits: 810.1 E(85289): 0
Smith-Waterman score: 3386; 100.0% identity (100.0% similar) in 513 aa overlap (1-513:1-513)
10 20 30 40 50 60
pF1KE6 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 QYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 MLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 QKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMGVNMETARFFKS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILTMPNDDITHPIP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 DLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 AIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRI
430 440 450 460 470 480
490 500 510
pF1KE6 FPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL
:::::::::::::::::::::::::::::::::
NP_001 FPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL
490 500 510
>>XP_011531209 (OMIM: 192132,267300) PREDICTED: V-type p (553 aa)
initn: 2994 init1: 2994 opt: 2994 Z-score: 3824.6 bits: 717.4 E(85289): 2.7e-206
Smith-Waterman score: 2994; 100.0% identity (100.0% similar) in 455 aa overlap (59-513:99-553)
30 40 50 60 70 80
pF1KE6 VTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKA
::::::::::::::::::::::::::::::
XP_011 EVASQCQLNFLGILMASKGLWNISVSATWVFAQYAEIVHFTLPDGTQRSGQVLEVAGTKA
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE6 IVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDIN
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE6 GQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVK
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE6 KSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSKAVLDYHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIIT
250 260 270 280 290 300
270 280 290 300 310 320
pF1KE6 PRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE6 YERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV
370 380 390 400 410 420
390 400 410 420 430 440
pF1KE6 LPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEF
430 440 450 460 470 480
450 460 470 480 490 500
pF1KE6 LQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLA
490 500 510 520 530 540
510
pF1KE6 PDTAL
:::::
XP_011 PDTAL
550
>>NP_001684 (OMIM: 124480,606939,616455) V-type proton A (511 aa)
initn: 2870 init1: 2870 opt: 2871 Z-score: 3667.9 bits: 688.3 E(85289): 1.5e-197
Smith-Waterman score: 2871; 87.3% identity (96.0% similar) in 495 aa overlap (9-503:20-509)
10 20 30 40
pF1KE6 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNG
: : :. .:: ::. ::.:::...::.::.:: .:::
NP_001 MALRAMRGIVNGAAPELPVPTGGPA----VGA-REQALAVSRNYLSQPRLTYKTVSGVNG
10 20 30 40 50
50 60 70 80 90 100
pF1KE6 PLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFT
:::.::.::: .::::::.::::::.::::::::.:.::.::::::::::::.::.::::
NP_001 PLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFT
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE6 GDILRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSRIYPEEMIQTGIS
:::::::::::::::::::::::::.::::.::::::: ::::::. :::::::::::::
NP_001 GDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGIS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE6 PIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLDYHDDNFAIVFAAMG
:: :::::::::::::::::::::::::::::::::::::: :.:: ..::::::::::
NP_001 AIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVVDYSEENFAIVFAAMG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE6 VNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLV
::::::::::::::.::.: ::::::::::::::::::::::::::::::::::::::::
NP_001 VNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLV
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE6 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRGGSITQIPILT
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
NP_001 ILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILT
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE6 MPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDH
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDH
360 370 380 390 400 410
410 420 430 440 450 460
pF1KE6 GDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFE
.::::::::::::::::::::::::::::::.::::::::::::.::: :::::::.:::
NP_001 ADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFERNFIAQGPYENRTVFE
420 430 440 450 460 470
470 480 490 500 510
pF1KE6 SLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAPDTAL
.::.::.:::::::::::::::....::: :..:
NP_001 TLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDSAKH
480 490 500 510
>>NP_001001935 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 261 init1: 141 opt: 393 Z-score: 500.2 bits: 102.1 E(85289): 4e-21
Smith-Waterman score: 393; 25.4% identity (58.1% similar) in 472 aa overlap (44-504:24-472)
20 30 40 50 60 70
pF1KE6 GSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDG
: :.. .. . .. .: :.:.:. .:
NP_001 MSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG
10 20 30 40 50
80 90 100 110 120 130
pF1KE6 TQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI
. :. :.. .. : :: :.. . . . :: :. .::.:..:::: .. :. :
NP_001 LK--GMSLNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI
60 70 80 90 100
140 150 160 170 180 190
pF1KE6 D-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGL
: :::. .. . ... : : :: .: .::::. .: . :.:::. :..
NP_001 DGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
110 120 130 140 150 160
200 210 220 230 240
pF1KE6 PHNEIAAQICRQAGLVKKSKAVLDYHDDNFAI--VFAAMGVNMETARFFKSDFEQNGTMG
.. :: . . ..: : :.. . ...:.: . :. . . . . .:
NP_001 GKTSIAIDT------IINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE6 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE
. . :.: . . ..: . . .:.. . ::.:.: :.:. : : :..: .
NP_001 YTIVVSATASDAAPLQYLAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLR
230 240 250 260 270
310 320 330 340 350 360
pF1KE6 EVPGRRGFPGYMYTDLATIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFIT
. :::...:: .. . . :::.... :::.: .:.. :.. :: . ::
NP_001 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE6 EGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQ
.:::... .: . : : ::: :.::. ..: ..: .. : .. .: : : ..:
NP_001 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVA
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE6 AMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----P
:. : : . .. . : . .. : ...:: : .. :.. . . .: . :
NP_001 AF-AQFGSDLDAATQQLLSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEP
400 410 420 430 440 450
490 500 510
pF1KE6 KEMLKRIPQAVIDEFYSREGALQDLAPDTAL
... : . .: ... :.. ::
NP_001 SKITK-FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
460 470 480 490 500
>>NP_001244264 (OMIM: 164360,615228,616045) ATP synthase (503 aa)
initn: 261 init1: 141 opt: 393 Z-score: 500.2 bits: 102.1 E(85289): 4e-21
Smith-Waterman score: 393; 25.4% identity (58.1% similar) in 472 aa overlap (44-504:24-472)
20 30 40 50 60 70
pF1KE6 GSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDG
: :.. .. . .. .: :.:.:. .:
NP_001 MSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG
10 20 30 40 50
80 90 100 110 120 130
pF1KE6 TQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI
. :. :.. .. : :: :.. . . . :: :. .::.:..:::: .. :. :
NP_001 LK--GMSLNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI
60 70 80 90 100
140 150 160 170 180 190
pF1KE6 D-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGL
: :::. .. . ... : : :: .: .::::. .: . :.:::. :..
NP_001 DGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
110 120 130 140 150 160
200 210 220 230 240
pF1KE6 PHNEIAAQICRQAGLVKKSKAVLDYHDDNFAI--VFAAMGVNMETARFFKSDFEQNGTMG
.. :: . . ..: : :.. . ...:.: . :. . . . . .:
NP_001 GKTSIAIDT------IINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE6 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE
. . :.: . . ..: . . .:.. . ::.:.: :.:. : : :..: .
NP_001 YTIVVSATASDAAPLQYLAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLR
230 240 250 260 270
310 320 330 340 350 360
pF1KE6 EVPGRRGFPGYMYTDLATIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFIT
. :::...:: .. . . :::.... :::.: .:.. :.. :: . ::
NP_001 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE6 EGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQ
.:::... .: . : : ::: :.::. ..: ..: .. : .. .: : : ..:
NP_001 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVA
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE6 AMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----P
:. : : . .. . : . .. : ...:: : .. :.. . . .: . :
NP_001 AF-AQFGSDLDAATQQLLSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEP
400 410 420 430 440 450
490 500 510
pF1KE6 KEMLKRIPQAVIDEFYSREGALQDLAPDTAL
... : . .: ... :.. ::
NP_001 SKITK-FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
460 470 480 490 500
>>NP_004037 (OMIM: 164360,615228,616045) ATP synthase su (553 aa)
initn: 261 init1: 141 opt: 393 Z-score: 499.6 bits: 102.1 E(85289): 4.3e-21
Smith-Waterman score: 393; 25.4% identity (58.1% similar) in 472 aa overlap (44-504:74-522)
20 30 40 50 60 70
pF1KE6 GSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDG
: :.. .. . .. .: :.:.:. .:
NP_004 QKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE6 TQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI
. :. :.. .. : :: :.. . . . :: :. .::.:..:::: .. :. :
NP_004 LK--GMSLNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI
110 120 130 140 150
140 150 160 170 180 190
pF1KE6 D-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGL
: :::. .. . ... : : :: .: .::::. .: . :.:::. :..
NP_004 DGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
160 170 180 190 200 210
200 210 220 230 240
pF1KE6 PHNEIAAQICRQAGLVKKSKAVLDYHDDNFAI--VFAAMGVNMETARFFKSDFEQNGTMG
.. :: . . ..: : :.. . ...:.: . :. . . . . .:
NP_004 GKTSIAIDT------IINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK
220 230 240 250 260 270
250 260 270 280 290 300
pF1KE6 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE
. . :.: . . ..: . . .:.. . ::.:.: :.:. : : :..: .
NP_004 YTIVVSATASDAAPLQYLAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLR
280 290 300 310 320
310 320 330 340 350 360
pF1KE6 EVPGRRGFPGYMYTDLATIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFIT
. :::...:: .. . . :::.... :::.: .:.. :.. :: . ::
NP_004 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT
330 340 350 360 370 380
370 380 390 400 410 420
pF1KE6 EGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQ
.:::... .: . : : ::: :.::. ..: ..: .. : .. .: : : ..:
NP_004 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVA
390 400 410 420 430 440
430 440 450 460 470 480
pF1KE6 AMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----P
:. : : . .. . : . .. : ...:: : .. :.. . . .: . :
NP_004 AF-AQFGSDLDAATQQLLSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEP
450 460 470 480 490 500
490 500 510
pF1KE6 KEMLKRIPQAVIDEFYSREGALQDLAPDTAL
... : . .: ... :.. ::
NP_004 SKITK-FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
510 520 530 540 550
>>NP_001001937 (OMIM: 164360,615228,616045) ATP synthase (553 aa)
initn: 261 init1: 141 opt: 393 Z-score: 499.6 bits: 102.1 E(85289): 4.3e-21
Smith-Waterman score: 393; 25.4% identity (58.1% similar) in 472 aa overlap (44-504:74-522)
20 30 40 50 60 70
pF1KE6 GSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDG
: :.. .. . .. .: :.:.:. .:
NP_001 QKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE6 TQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI
. :. :.. .. : :: :.. . . . :: :. .::.:..:::: .. :. :
NP_001 LK--GMSLNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI
110 120 130 140 150
140 150 160 170 180 190
pF1KE6 D-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGL
: :::. .. . ... : : :: .: .::::. .: . :.:::. :..
NP_001 DGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
160 170 180 190 200 210
200 210 220 230 240
pF1KE6 PHNEIAAQICRQAGLVKKSKAVLDYHDDNFAI--VFAAMGVNMETARFFKSDFEQNGTMG
.. :: . . ..: : :.. . ...:.: . :. . . . . .:
NP_001 GKTSIAIDT------IINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK
220 230 240 250 260 270
250 260 270 280 290 300
pF1KE6 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE
. . :.: . . ..: . . .:.. . ::.:.: :.:. : : :..: .
NP_001 YTIVVSATASDAAPLQYLAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLR
280 290 300 310 320
310 320 330 340 350 360
pF1KE6 EVPGRRGFPGYMYTDLATIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFIT
. :::...:: .. . . :::.... :::.: .:.. :.. :: . ::
NP_001 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT
330 340 350 360 370 380
370 380 390 400 410 420
pF1KE6 EGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQ
.:::... .: . : : ::: :.::. ..: ..: .. : .. .: : : ..:
NP_001 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVA
390 400 410 420 430 440
430 440 450 460 470 480
pF1KE6 AMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----P
:. : : . .. . : . .. : ...:: : .. :.. . . .: . :
NP_001 AF-AQFGSDLDAATQQLLSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEP
450 460 470 480 490 500
490 500 510
pF1KE6 KEMLKRIPQAVIDEFYSREGALQDLAPDTAL
... : . .: ... :.. ::
NP_001 SKITK-FENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
510 520 530 540 550
>>XP_016881278 (OMIM: 164360,615228,616045) PREDICTED: A (586 aa)
initn: 261 init1: 141 opt: 393 Z-score: 499.2 bits: 102.2 E(85289): 4.5e-21
Smith-Waterman score: 393; 25.4% identity (58.1% similar) in 472 aa overlap (44-504:74-522)
20 30 40 50 60 70
pF1KE6 GSSCNLGAAREHMQAVTRNYITHPRVTYRTVCSVNGPLVVLDRVKFAQYAEIVHFTLPDG
: :.. .. . .. .: :.:.:. .:
XP_016 QKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFS--SG
50 60 70 80 90 100
80 90 100 110 120 130
pF1KE6 TQRSGQVLEVAGTKAIVQVFEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPI
. :. :.. .. : :: :.. . . . :: :. .::.:..:::: .. :. :
XP_016 LK--GMSLNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAI
110 120 130 140 150
140 150 160 170 180 190
pF1KE6 D-KGPV-VMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGL
: :::. .. . ... : : :: .: .::::. .: . :.:::. :..
XP_016 DGKGPIGSKTRRRVGLKAPGIIP--RISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQT
160 170 180 190 200 210
200 210 220 230 240
pF1KE6 PHNEIAAQICRQAGLVKKSKAVLDYHDDNFAI--VFAAMGVNMETARFFKSDFEQNGTMG
.. :: . . ..: : :.. . ...:.: . :. . . . . .:
XP_016 GKTSIAIDT------IINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMK
220 230 240 250 260 270
250 260 270 280 290 300
pF1KE6 NVCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAARE
. . :.: . . ..: . . .:.. . ::.:.: :.:. : : :..: .
XP_016 YTIVVSATASDAAPLQYLAPYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLR
280 290 300 310 320
310 320 330 340 350 360
pF1KE6 EVPGRRGFPGYMYTDLATIYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFIT
. :::...:: .. . . :::.... :::.: .:.. :.. :: . ::
XP_016 RPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISIT
330 340 350 360 370 380
370 380 390 400 410 420
pF1KE6 EGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQ
.:::... .: . : : ::: :.::. ..: ..: .. : .. .: : : ..:
XP_016 DGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVA
390 400 410 420 430 440
430 440 450 460 470 480
pF1KE6 AMKAVVGEEALTSEDLLYLEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----P
:. : : . .. . : . .. : ...:: : .. :.. . . .: . :
XP_016 AF-AQFGSDLDAATQQLLSRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEP
450 460 470 480 490 500
490 500 510
pF1KE6 KEMLKRIPQAVIDEFYSREGALQDLAPDTAL
... : . .: ... :.. ::
XP_016 SKITK-FENAFLSHVVSQHQALLGTIRYECNCWHLFLKLCLRYEVKIIFKSVVRLVIKTF
510 520 530 540 550 560
>>NP_001677 (OMIM: 102910) ATP synthase subunit beta, mi (529 aa)
initn: 373 init1: 147 opt: 361 Z-score: 459.0 bits: 94.6 E(85289): 7.9e-19
Smith-Waterman score: 442; 26.2% identity (55.5% similar) in 503 aa overlap (12-497:26-499)
10 20 30 40
pF1KE6 MAMEIDSRPGGLPGSSCNLGAAREHMQAVTRNYITH----PRVTYR
:: .. : :: .. : :.: .. :..
NP_001 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPV-RDYAAQTSPSPKAGAA
10 20 30 40 50
50 60 70 80 90
pF1KE6 T--VCSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVA---GTKAIVQV-FEGT
: . .: : .:.: :.: . . .: ... ::::: : ... . ..::
NP_001 TGRIVAVIG--AVVD-VQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGT
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE6 SGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPID-KGPVVMAEDFLDINGQPINPH
:. .: .: .. ::. . :::..: :.::: .::. ...: :... .
NP_001 EGL-VRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPI-KTKQFAPIHAEAPEFM
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE6 SRIYPEEMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKAVLD
.:.. :::. .:.. :.: :: .:..::. .. . .. .. .::
NP_001 EMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNV-----AKAHGG
180 190 200 210 220
220 230 240 250 260
pF1KE6 YHDDNFAIVFAAMGVNMETARFFKSDFEQNGTMG------NVCLFLNLANDPTIERIITP
: :::..: . . . .. ..:... .: : . :.: : .
NP_001 YS------VFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVA
230 240 250 260 270 280
270 280 290 300 310 320
pF1KE6 RLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIY
.::.::.. : . ::... .. ...: :::: ..:. :. . ::..:.
NP_001 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE6 ERAGRVEGRGGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINVL
:: . . ::::.. . .: ::.: : : : .. ..: . . ::: .. :
NP_001 ERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPL
350 360 370 380 390 400
390 400 410 420 430 440
pF1KE6 PSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLYLEFL
: ::.: : . ..: ::. . :..: . :..: . :. :: : .
NP_001 DSTSRIMDPNI----VGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRA
410 420 430 440 450
450 460 470 480 490 500
pF1KE6 QKFEKNFINQGPYENRSVFESLDLGWKLLRIFPKEMLKRIPQAVIDEFYSREGALQDLAP
.:... :..: :.. :: . .: ::. . :: .: . : . :.
NP_001 RKIQR-FLSQ-PFQVAEVFTG-HMG-KLVPL--KETIKGFQQILAGEYDHLPEQAFYMVG
460 470 480 490 500 510
510
pF1KE6 DTAL
NP_001 PIEEAVAKADKLAEEHSS
520
>>NP_001244263 (OMIM: 164360,615228,616045) ATP synthase (531 aa)
initn: 202 init1: 141 opt: 311 Z-score: 395.0 bits: 82.7 E(85289): 2.9e-15
Smith-Waterman score: 326; 24.2% identity (55.9% similar) in 454 aa overlap (75-504:69-500)
50 60 70 80 90 100
pF1KE6 CSVNGPLVVLDRVKFAQYAEIVHFTLPDGTQRSGQVLEVAGTKAIVQVFEGTSGIDARKT
...:.:: .. : :. : ...:..
NP_001 SNTHLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVH---GLRNVQAEEM
40 50 60 70 80 90
110 120 130 140 150
pF1KE6 TCEFTGDI--LRTPVSEDMLGRVFNGSGKPIDKGPVVMAEDFLDINGQPINPHSR-----
. ::.. . . . : .: : :. : : .: .: . ..: ::. ..:
NP_001 V-EFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAI-VDG-PIGSKTRRRVGL
100 110 120 130 140 150
160 170 180 190 200
pF1KE6 ----IYPE----EMIQTGISPIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKK
: :. : .::::. .: . :.:::. :.. .. :: . . .
NP_001 KAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDT------IIN
160 170 180 190 200
210 220 230 240 250 260
pF1KE6 SKAVLDYHDDNFAI--VFAAMGVNMETARFFKSDFEQNGTMGNVCLFLNLANDPTIERII
.: : :.. . ...:.: . :. . . . . .: . . :.: . . .
NP_001 QKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYL
210 220 230 240 250 260
270 280 290 300 310 320
pF1KE6 TPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLAT
.: . . .:.. . ::.:.: :.:. : : :..: .. :::...:: .. .
NP_001 APYSGCSMGEYF-RDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSR
270 280 290 300 310 320
330 340 350 360 370 380
pF1KE6 IYERAGRVEGR--GGSITQIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPP
. :::.... :::.: .:.. :.. :: . ::.:::... .: . : :
NP_001 LLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPA
330 340 350 360 370 380
390 400 410 420 430 440
pF1KE6 INVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAVVGEEALTSEDLLY
::: :.::. ..: ..: .. : .. .: : : ..: :. : : . .. . :
NP_001 INVGLSVSRVGSAAQTRAM-KQVAGTMKLEL-AQY---REVAAF-AQFGSDLDAATQQLL
390 400 410 420 430
450 460 470 480 490 500
pF1KE6 LEFLQKFEKNFINQGPYENRSVFESLDLGWKLLRIF-----PKEMLKRIPQAVIDEFYSR
. .. : ...:: : .. :.. . . .: . :... : . .: ... :.
NP_001 SRGVRLTE--LLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITK-FENAFLSHVVSQ
440 450 460 470 480 490
510
pF1KE6 EGALQDLAPDTAL
. ::
NP_001 HQALLGTIRADGKISEQSDAKLKEIVTNFLAGFEA
500 510 520 530
513 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 13:43:16 2016 done: Tue Nov 8 13:43:17 2016
Total Scan time: 7.030 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]