Result of FASTA (omim) for pFN21AE9688
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE9688, 304 aa
  1>>>pF1KE9688 304 - 304 aa - 304 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8951+/-0.000348; mu= 12.7159+/- 0.022
 mean_var=77.9099+/-15.220, 0's: 0 Z-trim(115.6): 22  B-trim: 0 in 0/53
 Lambda= 0.145304
 statistics sampled from 26199 (26221) to 26199 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.307), width:  16
 Scan time:  6.370

The best scores are:                                      opt bits E(85289)
XP_016878063 (OMIM: 616235) PREDICTED: KATNB1-like ( 304) 2034 435.7 5.5e-122
XP_016878062 (OMIM: 616235) PREDICTED: KATNB1-like ( 304) 2034 435.7 5.5e-122
XP_016878061 (OMIM: 616235) PREDICTED: KATNB1-like ( 304) 2034 435.7 5.5e-122
NP_078989 (OMIM: 616235) KATNB1-like protein 1 [Ho ( 304) 2034 435.7 5.5e-122
XP_016878060 (OMIM: 616235) PREDICTED: KATNB1-like ( 304) 2034 435.7 5.5e-122
XP_005254725 (OMIM: 616235) PREDICTED: KATNB1-like ( 298) 1968 421.8 7.9e-118
XP_016878064 (OMIM: 616235) PREDICTED: KATNB1-like ( 227) 1246 270.4 2.3e-72
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655)  189 49.1 2.9e-05
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655)  189 49.1 2.9e-05
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655)  189 49.1 2.9e-05
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658)  189 49.1 2.9e-05


>>XP_016878063 (OMIM: 616235) PREDICTED: KATNB1-like pro  (304 aa)
 initn: 2034 init1: 2034 opt: 2034  Z-score: 2311.0  bits: 435.7 E(85289): 5.5e-122
Smith-Waterman score: 2034; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
              250       260       270       280       290       300

           
pF1KE9 LQLH
       ::::
XP_016 LQLH
           

>>XP_016878062 (OMIM: 616235) PREDICTED: KATNB1-like pro  (304 aa)
 initn: 2034 init1: 2034 opt: 2034  Z-score: 2311.0  bits: 435.7 E(85289): 5.5e-122
Smith-Waterman score: 2034; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
              250       260       270       280       290       300

           
pF1KE9 LQLH
       ::::
XP_016 LQLH
           

>>XP_016878061 (OMIM: 616235) PREDICTED: KATNB1-like pro  (304 aa)
 initn: 2034 init1: 2034 opt: 2034  Z-score: 2311.0  bits: 435.7 E(85289): 5.5e-122
Smith-Waterman score: 2034; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
              250       260       270       280       290       300

           
pF1KE9 LQLH
       ::::
XP_016 LQLH
           

>>NP_078989 (OMIM: 616235) KATNB1-like protein 1 [Homo s  (304 aa)
 initn: 2034 init1: 2034 opt: 2034  Z-score: 2311.0  bits: 435.7 E(85289): 5.5e-122
Smith-Waterman score: 2034; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_078 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
              250       260       270       280       290       300

           
pF1KE9 LQLH
       ::::
NP_078 LQLH
           

>>XP_016878060 (OMIM: 616235) PREDICTED: KATNB1-like pro  (304 aa)
 initn: 2034 init1: 2034 opt: 2034  Z-score: 2311.0  bits: 435.7 E(85289): 5.5e-122
Smith-Waterman score: 2034; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
              250       260       270       280       290       300

           
pF1KE9 LQLH
       ::::
XP_016 LQLH
           

>>XP_005254725 (OMIM: 616235) PREDICTED: KATNB1-like pro  (298 aa)
 initn: 1968 init1: 1968 opt: 1968  Z-score: 2236.4  bits: 421.8 E(85289): 7.9e-118
Smith-Waterman score: 1968; 100.0% identity (100.0% similar) in 294 aa overlap (1-294:1-294)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::      
XP_005 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKVLCV  
              250       260       270       280       290          

           
pF1KE9 LQLH

>>XP_016878064 (OMIM: 616235) PREDICTED: KATNB1-like pro  (227 aa)
 initn: 1503 init1: 1246 opt: 1246  Z-score: 1420.2  bits: 270.4 E(85289): 2.3e-72
Smith-Waterman score: 1353; 74.7% identity (74.7% similar) in 304 aa overlap (1-304:1-227)

               10        20        30        40        50        60
pF1KE9 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE9 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE9 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE9 VAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLN
       ::::::                                                      
XP_016 VAYLLR------------------------------------------------------
                                                                   

              250       260       270       280       290       300
pF1KE9 WLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
                              :::::::::::::::::::::::::::::::::::::
XP_016 -----------------------NIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYL
                               190       200       210       220   

           
pF1KE9 LQLH
       ::::
XP_016 LQLH
           

>>XP_016878352 (OMIM: 602703,616212) PREDICTED: katanin   (655 aa)
 initn: 191 init1: 107 opt: 189  Z-score: 215.6  bits: 49.1 E(85289): 2.9e-05
Smith-Waterman score: 189; 33.3% identity (65.7% similar) in 105 aa overlap (145-249:489-589)

          120       130       140       150       160       170    
pF1KE9 HHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRK
                                     :.. . :.::  :: ::.  :... . :  
XP_016 RNEPIGLKASDFLPAVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTM
      460       470       480       490       500       510        

          180       190       200       210       220       230    
pF1KE9 RSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEY
        .:.  :   . :.::.::::    : : .... .  .:  :. .:: ...::.::.: :
XP_016 GDIKTSVDSAVAINDLSVVVD----LLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESY
      520       530           540       550       560       570    

          240       250       260       270       280       290    
pF1KE9 VIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAK
       : .: . :. ...:.                                             
XP_016 VQTGCTSLKLILQRFLPLITDMLAAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKS
          580       590       600       610       620       630    

>>XP_016878353 (OMIM: 602703,616212) PREDICTED: katanin   (655 aa)
 initn: 191 init1: 107 opt: 189  Z-score: 215.6  bits: 49.1 E(85289): 2.9e-05
Smith-Waterman score: 189; 33.3% identity (65.7% similar) in 105 aa overlap (145-249:489-589)

          120       130       140       150       160       170    
pF1KE9 HHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRK
                                     :.. . :.::  :: ::.  :... . :  
XP_016 RNEPIGLKASDFLPAVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTM
      460       470       480       490       500       510        

          180       190       200       210       220       230    
pF1KE9 RSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEY
        .:.  :   . :.::.::::    : : .... .  .:  :. .:: ...::.::.: :
XP_016 GDIKTSVDSAVAINDLSVVVD----LLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESY
      520       530           540       550       560       570    

          240       250       260       270       280       290    
pF1KE9 VIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAK
       : .: . :. ...:.                                             
XP_016 VQTGCTSLKLILQRFLPLITDMLAAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKS
          580       590       600       610       620       630    

>>NP_005877 (OMIM: 602703,616212) katanin p80 WD40 repea  (655 aa)
 initn: 191 init1: 107 opt: 189  Z-score: 215.6  bits: 49.1 E(85289): 2.9e-05
Smith-Waterman score: 189; 33.3% identity (65.7% similar) in 105 aa overlap (145-249:489-589)

          120       130       140       150       160       170    
pF1KE9 HHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRK
                                     :.. . :.::  :: ::.  :... . :  
NP_005 RNEPIGLKASDFLPAVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTM
      460       470       480       490       500       510        

          180       190       200       210       220       230    
pF1KE9 RSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEY
        .:.  :   . :.::.::::    : : .... .  .:  :. .:: ...::.::.: :
NP_005 GDIKTSVDSAVAINDLSVVVD----LLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESY
      520       530           540       550       560       570    

          240       250       260       270       280       290    
pF1KE9 VIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAK
       : .: . :. ...:.                                             
NP_005 VQTGCTSLKLILQRFLPLITDMLAAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKS
          580       590       600       610       620       630    




304 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 10:36:07 2016 done: Tue Nov  8 10:36:08 2016
 Total Scan time:  6.370 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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