FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3711, 359 aa 1>>>pF1KE3711 359 - 359 aa - 359 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2578+/-0.000302; mu= 17.6449+/- 0.019 mean_var=220.3158+/-45.175, 0's: 0 Z-trim(124.5): 55 B-trim: 745 in 1/56 Lambda= 0.086407 statistics sampled from 46295 (46361) to 46295 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.544), width: 16 Scan time: 10.300 The best scores are: opt bits E(85289) NP_001153014 (OMIM: 615739) putative POU domain, c ( 359) 2518 325.8 9.3e-89 NP_002692 (OMIM: 164177) POU domain, class 5, tran ( 360) 2413 312.7 8.1e-85 NP_001272916 (OMIM: 164177) POU domain, class 5, t ( 265) 1461 193.8 3.6e-49 NP_976034 (OMIM: 164177) POU domain, class 5, tran ( 190) 1251 167.4 2.3e-41 NP_001167002 (OMIM: 164177) POU domain, class 5, t ( 190) 1251 167.4 2.3e-41 NP_001272915 (OMIM: 164177) POU domain, class 5, t ( 164) 1086 146.8 3.3e-35 NP_006227 (OMIM: 602480) POU domain, class 3, tran ( 500) 666 95.1 3.5e-19 NP_002690 (OMIM: 602479) POU domain, class 3, tran ( 451) 639 91.7 3.4e-18 NP_000298 (OMIM: 300039,304400) POU domain, class ( 361) 634 90.9 4.7e-18 NP_005595 (OMIM: 600494) POU domain, class 3, tran ( 443) 635 91.2 4.8e-18 XP_011507957 (OMIM: 164175) PREDICTED: POU domain, ( 671) 559 82.0 4.3e-15 NP_001185715 (OMIM: 164175) POU domain, class 2, t ( 703) 559 82.0 4.4e-15 XP_011507956 (OMIM: 164175) PREDICTED: POU domain, ( 743) 559 82.1 4.5e-15 NP_001185712 (OMIM: 164175) POU domain, class 2, t ( 755) 559 82.1 4.5e-15 NP_002688 (OMIM: 164175) POU domain, class 2, tran ( 766) 559 82.1 4.6e-15 XP_011507955 (OMIM: 164175) PREDICTED: POU domain, ( 769) 559 82.1 4.6e-15 XP_011541044 (OMIM: 607394) PREDICTED: POU domain, ( 403) 532 78.3 3.3e-14 XP_011541043 (OMIM: 607394) PREDICTED: POU domain, ( 403) 532 78.3 3.3e-14 XP_011541045 (OMIM: 607394) PREDICTED: POU domain, ( 403) 532 78.3 3.3e-14 XP_016872976 (OMIM: 607394) PREDICTED: POU domain, ( 356) 531 78.1 3.4e-14 XP_011541042 (OMIM: 607394) PREDICTED: POU domain, ( 432) 532 78.3 3.5e-14 XP_011541041 (OMIM: 607394) PREDICTED: POU domain, ( 432) 532 78.3 3.5e-14 NP_055167 (OMIM: 607394) POU domain, class 2, tran ( 436) 532 78.3 3.5e-14 NP_001231611 (OMIM: 607394) POU domain, class 2, t ( 438) 532 78.3 3.5e-14 NP_006228 (OMIM: 601632) POU domain, class 4, tran ( 419) 489 73.0 1.4e-12 NP_000297 (OMIM: 173110,613038) pituitary-specific ( 291) 463 69.5 1.1e-11 NP_001116229 (OMIM: 173110,613038) pituitary-speci ( 317) 463 69.5 1.1e-11 NP_002691 (OMIM: 602459,602460) POU domain, class ( 338) 431 65.6 1.9e-10 NP_004566 (OMIM: 113725) POU domain, class 4, tran ( 409) 427 65.2 2.9e-10 NP_001193955 (OMIM: 164176) POU domain, class 2, t ( 467) 393 61.1 5.9e-09 NP_001193954 (OMIM: 164176) POU domain, class 2, t ( 479) 393 61.1 6e-09 XP_011525343 (OMIM: 164176) PREDICTED: POU domain, ( 501) 393 61.1 6.2e-09 XP_016882385 (OMIM: 164176) PREDICTED: POU domain, ( 600) 393 61.2 6.8e-09 XP_016882384 (OMIM: 164176) PREDICTED: POU domain, ( 602) 393 61.2 6.8e-09 XP_016882383 (OMIM: 164176) PREDICTED: POU domain, ( 602) 393 61.2 6.8e-09 XP_011525342 (OMIM: 164176) PREDICTED: POU domain, ( 624) 393 61.3 6.9e-09 XP_016882381 (OMIM: 164176) PREDICTED: POU domain, ( 701) 393 61.3 7.4e-09 XP_016882378 (OMIM: 164176) PREDICTED: POU domain, ( 711) 393 61.3 7.4e-09 XP_016882377 (OMIM: 164176) PREDICTED: POU domain, ( 711) 393 61.3 7.4e-09 XP_016882375 (OMIM: 164176) PREDICTED: POU domain, ( 711) 393 61.3 7.4e-09 XP_016882379 (OMIM: 164176) PREDICTED: POU domain, ( 711) 393 61.3 7.4e-09 XP_016882376 (OMIM: 164176) PREDICTED: POU domain, ( 711) 393 61.3 7.4e-09 XP_016882373 (OMIM: 164176) PREDICTED: POU domain, ( 723) 393 61.4 7.5e-09 XP_016882374 (OMIM: 164176) PREDICTED: POU domain, ( 723) 393 61.4 7.5e-09 XP_011525345 (OMIM: 164176) PREDICTED: POU domain, ( 537) 388 60.5 9.9e-09 NP_001159490 (OMIM: 601583,609062) POU domain, cla ( 655) 388 60.7 1.1e-08 XP_016856997 (OMIM: 164175) PREDICTED: POU domain, ( 381) 353 55.9 1.7e-07 NP_002689 (OMIM: 164176) POU domain, class 2, tran ( 463) 350 55.7 2.4e-07 XP_011525344 (OMIM: 164176) PREDICTED: POU domain, ( 485) 350 55.7 2.5e-07 XP_005259067 (OMIM: 164176) PREDICTED: POU domain, ( 586) 350 55.9 2.8e-07 >>NP_001153014 (OMIM: 615739) putative POU domain, class (359 aa) initn: 2518 init1: 2518 opt: 2518 Z-score: 1714.5 bits: 325.8 E(85289): 9.3e-89 Smith-Waterman score: 2518; 99.4% identity (99.7% similar) in 359 aa overlap (1-359:1-359) 10 20 30 40 50 60 pF1KE3 MAGHLASDFAFSPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAGHLASDFAFSPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PPCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PPCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AVKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AVKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNDENLQEICKAETLMQARKRKRTSIENR : :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: NP_001 QKTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLMQARKRKRTSIENR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VRGNLENLFLQCPKPTLQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VRGNLENLFLQCPKPTLQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAA 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 GSPFSGGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GSPFSGGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN 310 320 330 340 350 >>NP_002692 (OMIM: 164177) POU domain, class 5, transcri (360 aa) initn: 1735 init1: 1735 opt: 2413 Z-score: 1643.7 bits: 312.7 E(85289): 8.1e-85 Smith-Waterman score: 2413; 95.8% identity (97.8% similar) in 360 aa overlap (1-359:1-360) 10 20 30 40 50 60 pF1KE3 MAGHLASDFAFSPPPGGGGDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGI :::::::::::::::::::::: : ::::::: ::::::::::::::::::::::::::: NP_002 MAGHLASDFAFSPPPGGGGDGPGGPEPGWVDPRTWLSFQGPPGGPGIGPGVGPGSEVWGI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PPCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPG ::::::::.:::::::::::::::::::::::::::.::::::::::.::::::::: :: NP_002 PPCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AVKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFS ::::::::::::::.:::::::::::::::::::::::::::::::::: :::::::::: NP_002 AVKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNDENLQEICKAETLMQARKRKRTSIENR :::::::::::::::::::::::::::::::::.::::::::::::.::::::::::::: NP_002 QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 VRGNLENLFLQCPKPTLQ-ISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEA :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: NP_002 VRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEA 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE3 AGSPFSGGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN ::::::::::::: :::::::::::::::::::::::::::::.:::::: ::::::::: NP_002 AGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGSPMHSN 310 320 330 340 350 360 >>NP_001272916 (OMIM: 164177) POU domain, class 5, trans (265 aa) initn: 783 init1: 783 opt: 1461 Z-score: 1003.6 bits: 193.8 E(85289): 3.6e-49 Smith-Waterman score: 1461; 96.5% identity (98.2% similar) in 226 aa overlap (135-359:40-265) 110 120 130 140 150 160 pF1KE3 SNSNGASPEPCTVPPGAVKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQ .::::::::::::::::::::::::::::: NP_001 ATRRFLNPEWKGEIDNWCVYVLTSLLPFKIQSQDIKALQKELEQFAKLLKQKRITLGYTQ 10 20 30 40 50 60 170 180 190 200 210 220 pF1KE3 ADVGLILGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNDENLQEICKAE ::::: :::::::::::::::::::::::::::::::::::::::::::.:::::::::: NP_001 ADVGLTLGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAE 70 80 90 100 110 120 230 240 250 260 270 280 pF1KE3 TLMQARKRKRTSIENRVRGNLENLFLQCPKPTLQ-ISHIAQQLGLEKDVVRVWFCNRRQK ::.::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: NP_001 TLVQARKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQK 130 140 150 160 170 180 290 300 310 320 330 340 pF1KE3 GKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEV ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::. NP_001 GKRSSSDYAQREDFEAAGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVPFPEGEA 190 200 210 220 230 240 350 pF1KE3 FPPVSVITLGSPMHSN :::::: ::::::::: NP_001 FPPVSVTTLGSPMHSN 250 260 >>NP_976034 (OMIM: 164177) POU domain, class 5, transcri (190 aa) initn: 697 init1: 697 opt: 1251 Z-score: 863.6 bits: 167.4 E(85289): 2.3e-41 Smith-Waterman score: 1251; 96.3% identity (98.4% similar) in 190 aa overlap (171-359:1-190) 150 160 170 180 190 200 pF1KE3 ALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQTTICRFEALQLSFKNMCKL .::::::::::::::::::::::::::::: NP_976 MGVLFGKVFSQTTICRFEALQLSFKNMCKL 10 20 30 210 220 230 240 250 pF1KE3 RPLLQKWVEEADNDENLQEICKAETLMQARKRKRTSIENRVRGNLENLFLQCPKPTLQ-I :::::::::::::.::::::::::::.::::::::::::::::::::::::::::::: : NP_976 RPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENRVRGNLENLFLQCPKPTLQQI 40 50 60 70 80 90 260 270 280 290 300 310 pF1KE3 SHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHF ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: NP_976 SHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPLAPGPHF 100 110 120 130 140 150 320 330 340 350 pF1KE3 GTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN :::::::::::::::::::::::.:::::: ::::::::: NP_976 GTPGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGSPMHSN 160 170 180 190 >>NP_001167002 (OMIM: 164177) POU domain, class 5, trans (190 aa) initn: 697 init1: 697 opt: 1251 Z-score: 863.6 bits: 167.4 E(85289): 2.3e-41 Smith-Waterman score: 1251; 96.3% identity (98.4% similar) in 190 aa overlap (171-359:1-190) 150 160 170 180 190 200 pF1KE3 ALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQTTICRFEALQLSFKNMCKL .::::::::::::::::::::::::::::: NP_001 MGVLFGKVFSQTTICRFEALQLSFKNMCKL 10 20 30 210 220 230 240 250 pF1KE3 RPLLQKWVEEADNDENLQEICKAETLMQARKRKRTSIENRVRGNLENLFLQCPKPTLQ-I :::::::::::::.::::::::::::.::::::::::::::::::::::::::::::: : NP_001 RPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENRVRGNLENLFLQCPKPTLQQI 40 50 60 70 80 90 260 270 280 290 300 310 pF1KE3 SHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHF ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: NP_001 SHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPLAPGPHF 100 110 120 130 140 150 320 330 340 350 pF1KE3 GTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN :::::::::::::::::::::::.:::::: ::::::::: NP_001 GTPGYGSPHFTALYSSVPFPEGEAFPPVSVTTLGSPMHSN 160 170 180 190 >>NP_001272915 (OMIM: 164177) POU domain, class 5, trans (164 aa) initn: 697 init1: 697 opt: 1086 Z-score: 753.0 bits: 146.8 E(85289): 3.3e-35 Smith-Waterman score: 1086; 96.3% identity (98.2% similar) in 164 aa overlap (197-359:1-164) 170 180 190 200 210 220 pF1KE3 VGLILGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNDENLQEICKAETL :::::::::::::::::.:::::::::::: NP_001 MCKLRPLLQKWVEEADNNENLQEICKAETL 10 20 30 230 240 250 260 270 280 pF1KE3 MQARKRKRTSIENRVRGNLENLFLQCPKPTLQ-ISHIAQQLGLEKDVVRVWFCNRRQKGK .::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: NP_001 VQARKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGK 40 50 60 70 80 90 290 300 310 320 330 340 pF1KE3 RSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFP ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::.:: NP_001 RSSSDYAQREDFEAAGSPFSGGPVSFPLAPGPHFGTPGYGSPHFTALYSSVPFPEGEAFP 100 110 120 130 140 150 350 pF1KE3 PVSVITLGSPMHSN :::: ::::::::: NP_001 PVSVTTLGSPMHSN 160 >>NP_006227 (OMIM: 602480) POU domain, class 3, transcri (500 aa) initn: 695 init1: 477 opt: 666 Z-score: 465.4 bits: 95.1 E(85289): 3.5e-19 Smith-Waterman score: 686; 43.3% identity (60.7% similar) in 328 aa overlap (13-320:177-494) 10 20 30 pF1KE3 MAGHLASDFAFSPPPGGGGDGPWGAEPGWVD----------- ::: : : ::: . . NP_006 PDVKGGAGRDDLHAGTALHHRGPPHLGPPPPPPHQGHPGGWGAAAAAAAAAAAAAAAAHL 150 160 170 180 190 200 40 50 60 70 80 90 pF1KE3 PLTWLSFQGPPGGPGIG-PGVGPGSEVWGIPPCPPPYELCGGMAYCGPQVGVGLVPQGGL : . : :: . . :: : : :. :: :: : : : .:: : . NP_006 PSMAGGQQPPPQSLLYSQPG---GFTVNGMLSAPPGPGGGGGGAGGGAQ---SLVHPGLV 210 220 230 240 250 260 100 110 120 130 140 pF1KE3 ETSQPE-SEAGVGVESNSNGASPEPCTV--PP---GAVKLEKEKLEQNPEKSQDIKALQK . . :: .: . ... :.: . :: :. :... .:.. . NP_006 RGDTPELAEHHHHHHHHAHPHPPHPHHAQGPPHHGGGGGGAGPGLNSHDPHSDEDTPTSD 270 280 290 300 310 320 150 160 170 180 190 200 pF1KE3 ELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQTTICRFEALQLSFKNMCKLRPLL .:::::: .::.:: ::.::::::: ::.:.:.:::::::::::::::::::::::.::: NP_006 DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLL 330 340 350 360 370 380 210 220 230 240 250 260 pF1KE3 QKWVEEADNDENLQEICKAETLMQARKRK-RTSIENRVRGNLENLFLQCPKPTLQ-ISHI .::.::::.. . . . :.:::: ::::: :.: ::. ::.::::. : :... NP_006 NKWLEEADSSTG-SPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNL 390 400 410 420 430 270 280 290 300 310 320 pF1KE3 AQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHFGTP :..: :::.:::::::::::: :: . :.. . . : : :: .: :: : NP_006 ADSLQLEKEVVRVWFCNRRQKEKRMTPPGIQQQTPDDVYSQV--GTVS-ADTPPPHHGLQ 440 450 460 470 480 490 330 340 350 pF1KE3 GYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN NP_006 TSVQ 500 >>NP_002690 (OMIM: 602479) POU domain, class 3, transcri (451 aa) initn: 672 init1: 465 opt: 639 Z-score: 447.6 bits: 91.7 E(85289): 3.4e-18 Smith-Waterman score: 689; 43.4% identity (60.3% similar) in 343 aa overlap (2-317:134-435) 10 20 pF1KE3 MAGHLASDFAFSPPPGG-GGDGPW------- : ::. :.:: ::. :: : NP_002 DDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGP--AMSPSPGASGGHQPQPLGLYAQ 110 120 130 140 150 160 30 40 50 60 70 pF1KE3 GAEPGWVDPLTWLSFQGPPGGPGIGPGVG-----PGSEVWGIPPCPPPYELCGGMAYCGP .: :: :. . :: : :::. : :. . : :::. : :. NP_002 AAYPG--GGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQ-LEPSPPPHLGAHGHAH--- 170 180 190 200 210 80 90 100 110 120 130 pF1KE3 QVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGAVKLEKEKLEQNPEKSQD : . :::... . . :.: ..: : :. ... .:.: NP_002 ----GHAHAGGLHAAAAHLHPGAGGGGSSVG-----------------EHSDEDAPSSDD 220 230 240 250 140 150 160 170 180 190 pF1KE3 IKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQTTICRFEALQLSFKNMC :::::: .::.:: ::.::::::: ::.:.:.::::::::::::::::::::: NP_002 -------LEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMC 260 270 280 290 300 200 210 220 230 240 250 pF1KE3 KLRPLLQKWVEEADNDE----NLQEICKAETLMQARKRK-RTSIENRVRGNLENLFLQCP ::.:::.::.::.:.. ::..: :.:::: ::::: :.: ::. ::.:: NP_002 KLKPLLNKWLEETDSSSGSPTNLDKIAA-----QGRKRKKRTSIEVGVKGALESHFLKCP 310 320 330 340 350 360 260 270 280 290 300 pF1KE3 KPTL-QISHIAQQLGLEKDVVRVWFCNRRQKGKR----SSSDYAQREDFEAAG--SPFSG ::. .:. .:..: :::.:::::::::::: :: ... . .: : : .: .: NP_002 KPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGG 370 380 390 400 410 420 310 320 330 340 350 pF1KE3 G--PVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN : : : :: : : NP_002 GASPPSAPPPPPPAALHHHHHHTLPGSVQ 430 440 450 >>NP_000298 (OMIM: 300039,304400) POU domain, class 3, t (361 aa) initn: 629 init1: 478 opt: 634 Z-score: 445.2 bits: 90.9 E(85289): 4.7e-18 Smith-Waterman score: 650; 49.2% identity (68.0% similar) in 244 aa overlap (58-294:114-343) 30 40 50 60 70 80 pF1KE3 GWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPYELCGGM---AYCGPQVGV-G :: : : : .:. .: : : : NP_000 GREDLQLGAIIHHRSPHVAHHSPHTNHPNAWGASPAPNPSITSSGQPLNVYSQPGFTVSG 90 100 110 120 130 140 90 100 110 120 130 140 pF1KE3 LVPQGGLETSQPESEAGVGVESNSNGASPEPCTV-PPGAVKLEKEKLEQNPEKSQDIKAL .. .::: . : . : .. : .: :: .: ... . ..:.. NP_000 MLEHGGL--TPPPAAA--------SAQSLHPVLREPPDHGELGSHHCQ---DHSDEETPT 150 160 170 180 190 150 160 170 180 190 200 pF1KE3 QKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQTTICRFEALQLSFKNMCKLRP . ::::::: .::.:: ::.::::::: ::.:.:.:::::::::::::::::::::::.: NP_000 SDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKP 200 210 220 230 240 250 210 220 230 240 250 260 pF1KE3 LLQKWVEEADNDENLQEICKAETLMQARKRK-RTSIENRVRGNLENLFLQCPKPTLQ-IS ::.::.::::.. . . . :.:::: ::::: :.: ::. ::.::::. : :: NP_000 LLNKWLEEADSSTG-SPTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEIS 260 270 280 290 300 270 280 290 300 310 320 pF1KE3 HIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFSGGPVSFPPAPGPHFG .:..: :::.:::::::::::: :: . :. NP_000 SLADSLQLEKEVVRVWFCNRRQKEKRMTPPGDQQPHEVYSHTVKTDTSCHDL 310 320 330 340 350 360 330 340 350 pF1KE3 TPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN >>NP_005595 (OMIM: 600494) POU domain, class 3, transcri (443 aa) initn: 719 init1: 479 opt: 635 Z-score: 445.0 bits: 91.2 E(85289): 4.8e-18 Smith-Waterman score: 650; 43.8% identity (62.6% similar) in 281 aa overlap (49-316:163-437) 20 30 40 50 60 70 pF1KE3 GDGPWGAEPGWVDPLTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPPPYELC-GGMAYCG :: : . . :: . ::. : NP_005 QQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNGGLLYSQ 140 150 160 170 180 190 80 90 100 110 120 pF1KE3 PQ------VGVGLVPQG----GLETSQPESEAGVGVESNSNGASPEPCTVPPGAVKLEKE :. .:.: : : ::. .. : . . . .: :: . NP_005 PSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHP 200 210 220 230 240 250 130 140 150 160 170 180 pF1KE3 KLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLFGKVFSQTTICRF ...:....: . . .:::::: .::.:: ::.::::::: ::.:.:.:::::::::: NP_005 GAHHDPHSDEDTPT-SDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRF 260 270 280 290 300 310 190 200 210 220 230 240 pF1KE3 EALQLSFKNMCKLRPLLQKWVEEADNDENLQEICKAETLMQARKRK-RTSIENRVRGNLE :::::::::::::.:::.::.::::.. . . . :.:::: ::::: :.: :: NP_005 EALQLSFKNMCKLKPLLNKWLEEADSSSG-SPTSIDKIAAQGRKRKKRTSIEVSVKGALE 320 330 340 350 360 370 250 260 270 280 290 300 pF1KE3 NLFLQCPKPTLQ-ISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDYAQREDFEAAGSPFS . ::.::::. : :. .:..: :::.:::::::::::: :: . . : . NP_005 SHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGGTLPGAEDV----Y 380 390 400 410 420 310 320 330 340 350 pF1KE3 GGPVSFPPAPGPHFGTPGYGSPHFTALYSSVPFPEGEVFPPVSVITLGSPMHSN :: . :: : NP_005 GGSRDTPPHHGVQTPVQ 430 440 359 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:43:40 2016 done: Tue Nov 8 07:43:42 2016 Total Scan time: 10.300 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]