FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5194, 154 aa 1>>>pF1KE5194 154 - 154 aa - 154 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4688+/-0.000696; mu= 10.2155+/- 0.042 mean_var=53.6940+/-10.384, 0's: 0 Z-trim(108.3): 15 B-trim: 10 in 1/50 Lambda= 0.175029 statistics sampled from 10105 (10111) to 10105 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.311), width: 16 Scan time: 1.500 The best scores are: opt bits E(32554) CCDS53546.1 EIF5AL1 gene_id:143244|Hs108|chr10 ( 154) 1028 267.1 3e-72 CCDS11099.1 EIF5A gene_id:1984|Hs108|chr17 ( 154) 992 258.0 1.7e-69 CCDS45601.1 EIF5A gene_id:1984|Hs108|chr17 ( 184) 992 258.0 2e-69 CCDS3214.1 EIF5A2 gene_id:56648|Hs108|chr3 ( 153) 840 219.6 5.9e-58 >>CCDS53546.1 EIF5AL1 gene_id:143244|Hs108|chr10 (154 aa) initn: 1028 init1: 1028 opt: 1028 Z-score: 1410.5 bits: 267.1 E(32554): 3e-72 Smith-Waterman score: 1028; 100.0% identity (100.0% similar) in 154 aa overlap (1-154:1-154) 10 20 30 40 50 60 pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLG 70 80 90 100 110 120 130 140 150 pF1KE5 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK :::::::::::::::::::::::::::::::::: CCDS53 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 130 140 150 >>CCDS11099.1 EIF5A gene_id:1984|Hs108|chr17 (154 aa) initn: 992 init1: 992 opt: 992 Z-score: 1361.4 bits: 258.0 E(32554): 1.7e-69 Smith-Waterman score: 992; 98.1% identity (98.7% similar) in 154 aa overlap (1-154:1-154) 10 20 30 40 50 60 pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVG ::::::::::::::::::::::::::::::::::: ::::::::.::::::::::::::: CCDS11 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLG :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: CCDS11 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLG 70 80 90 100 110 120 130 140 150 pF1KE5 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK :::::::::::::::::::::::::::::::::: CCDS11 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK 130 140 150 >>CCDS45601.1 EIF5A gene_id:1984|Hs108|chr17 (184 aa) initn: 992 init1: 992 opt: 992 Z-score: 1360.0 bits: 258.0 E(32554): 2e-69 Smith-Waterman score: 992; 98.1% identity (98.7% similar) in 154 aa overlap (1-154:31-184) 10 20 30 pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGF :::::::::::::::::::::::::::::: CCDS45 MCGTGGTDSKTRRPPHRASFLKRLESKPLKMADDLDFETGDAGASATFPMQCSALRKNGF 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE5 VVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQ ::::: ::::::::.::::::::::::::::::::::::::::::::::::::::::::: CCDS45 VVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQ 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE5 LIGIQDGYLSLLQDSGEVPEDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: CCDS45 LIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 130 140 150 160 170 180 pF1KE5 AMAK :::: CCDS45 AMAK >>CCDS3214.1 EIF5A2 gene_id:56648|Hs108|chr3 (153 aa) initn: 840 init1: 840 opt: 840 Z-score: 1154.0 bits: 219.6 E(32554): 5.9e-58 Smith-Waterman score: 840; 82.0% identity (93.3% similar) in 150 aa overlap (1-150:1-150) 10 20 30 40 50 60 pF1KE5 MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVG :::..:: :::::::.:.::::::::::::::::: ::::::::.::::::::::::::: CCDS32 MADEIDFTTGDAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 IDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLG ::::::::::::::::::::::::::::.::: ::::::::: ..::: :::.::::.:: CCDS32 IDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICIQDGYLSLLTETGEVREDLKLPEGELG 70 80 90 100 110 120 130 140 150 pF1KE5 KEIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK :::: ::. ::.. ..:. ::.:: ::::: CCDS32 KEIEGKYNAGEDVQVSVMCAMSEEYAVAIKPCK 130 140 150 154 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:21:44 2016 done: Tue Nov 8 07:21:44 2016 Total Scan time: 1.500 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]