(Linear) (Six-base) MAPSORT of: KIAA0711.seq Check: 6612 from: 1 to: 1869 KIAA0711.orf With 182 enzymes: SgfI * December 5, 2014 12:53 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1369 1869 Size: 1369 500 AatII G_ACGT'C Cuts at: 0 1799 1869 Size: 1799 70 AccI GT'mk_AC Cuts at: 0 980 1869 Size: 980 889 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 111 1869 Size: 111 1758 AfeI AGC'GCT Cuts at: 0 1279 1471 1869 Size: 1279 192 398 Fragments arranged by size: 1279 398 192 AflIII A'CryG_T Cuts at: 0 1379 1869 Size: 1379 490 AhdI GACnn_n'nnGTC Cuts at: 0 351 1869 Size: 351 1518 AlwNI CAG_nnn'CTG Cuts at: 0 40 741 1869 Size: 40 701 1128 Fragments arranged by size: 1128 701 40 ApaI G_GGCC'C Cuts at: 0 1114 1308 1869 Size: 1114 194 561 Fragments arranged by size: 1114 561 194 AscI GG'CGCG_CC Cuts at: 0 1037 1869 Size: 1037 832 AvaI C'yCGr_G Cuts at: 0 46 358 367 390 901 945 1030 1325 Size: 46 312 9 23 511 44 85 295 Cuts at: 1325 1727 1847 1869 Size: 402 120 22 Fragments arranged by size: 511 402 312 295 120 85 46 44 23 22 9 BanI G'GyrC_C Cuts at: 0 76 250 312 443 652 1101 1314 1330 Size: 76 174 62 131 209 449 213 16 Cuts at: 1330 1678 1705 1783 1861 1869 Size: 348 27 78 78 8 Fragments arranged by size: 449 348 213 209 174 131 78 78 76 62 27 16 8 BanII G_rGCy'C Cuts at: 0 47 272 308 368 377 809 943 1114 Size: 47 225 36 60 9 432 134 171 Cuts at: 1114 1308 1393 1606 1869 Size: 194 85 213 263 Fragments arranged by size: 432 263 225 213 194 171 134 85 60 47 36 9 BbeI G_GCGC'C Cuts at: 0 80 254 316 447 656 1105 1318 1334 Size: 80 174 62 131 209 449 213 16 Cuts at: 1334 1682 1787 1865 1869 Size: 348 105 78 4 Fragments arranged by size: 449 348 213 209 174 131 105 80 78 62 16 4 BbsI GAAGACnn'nnnn_ Cuts at: 0 1137 1869 Size: 1137 732 BbvCI CC'TCA_GC Cuts at: 0 165 1869 Size: 165 1704 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1565 1599 1869 Size: 1565 34 270 Fragments arranged by size: 1565 270 34 BglI GCCn_nnn'nGGC Cuts at: 0 169 830 1118 1312 1631 1643 1703 1763 Size: 169 661 288 194 319 12 60 60 Cuts at: 1763 1869 Size: 106 Fragments arranged by size: 661 319 288 194 169 106 60 60 12 BglII A'GATC_T Cuts at: 0 1373 1869 Size: 1373 496 BlpI GC'TnA_GC Cuts at: 0 691 1267 1869 Size: 691 576 602 Fragments arranged by size: 691 602 576 Bme1580I G_kGCm'C Cuts at: 0 298 1114 1308 1450 1708 1869 Size: 298 816 194 142 258 161 Fragments arranged by size: 816 298 258 194 161 142 BmgBI CAC'GTC Cuts at: 0 516 1869 Size: 516 1353 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 183 451 811 1194 1869 Size: 183 268 360 383 675 Fragments arranged by size: 675 383 360 268 183 Bpu10I CC'TnA_GC Cuts at: 0 165 718 1869 Size: 165 553 1151 Fragments arranged by size: 1151 553 165 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 361 1396 1869 Size: 361 1035 473 Fragments arranged by size: 1035 473 361 BsaAI yAC'GTr Cuts at: 0 1380 1869 Size: 1380 489 BsaHI Gr'CG_yC Cuts at: 0 77 251 313 444 569 653 674 758 Size: 77 174 62 131 125 84 21 84 Cuts at: 758 1102 1315 1331 1679 1784 1796 1862 1869 Size: 344 213 16 348 105 12 66 7 Fragments arranged by size: 348 344 213 174 131 125 105 84 84 77 66 62 21 16 12 7 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 214 244 259 277 289 307 1435 1465 Size: 214 30 15 18 12 18 1128 30 Cuts at: 1465 1869 Size: 404 Fragments arranged by size: 1128 404 214 30 30 18 18 15 12 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 280 298 376 550 1869 Size: 280 18 78 174 1319 Fragments arranged by size: 1319 280 174 78 18 BseYI C'CCAG_C Cuts at: 0 1301 1779 1869 Size: 1301 478 90 Fragments arranged by size: 1301 478 90 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 547 1473 1869 Size: 547 926 396 Fragments arranged by size: 926 547 396 BsiEI CG_ry'CG Cuts at: 0 822 876 977 1001 1122 1299 1478 1869 Size: 822 54 101 24 121 177 179 391 Fragments arranged by size: 822 391 179 177 121 101 54 24 BsiHKAI G_wGCw'C Cuts at: 0 8 272 1811 1869 Size: 8 264 1539 58 Fragments arranged by size: 1539 264 58 8 Bsp1286I G_dGCh'C Cuts at: 0 8 47 272 298 308 368 377 809 Size: 8 39 225 26 10 60 9 432 Cuts at: 809 943 1114 1308 1393 1450 1606 1708 1811 Size: 134 171 194 85 57 156 102 103 Cuts at: 1811 1869 Size: 58 Fragments arranged by size: 432 225 194 171 156 134 103 102 85 60 58 57 39 26 10 9 8 BspHI T'CATG_A Cuts at: 0 773 1869 Size: 773 1096 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 854 1369 1869 Size: 854 515 500 Fragments arranged by size: 854 515 500 BsrBI CCG'CTC Cuts at: 0 225 840 1523 1559 1869 Size: 225 615 683 36 310 Fragments arranged by size: 683 615 310 225 36 BsrFI r'CCGG_y Cuts at: 0 238 446 625 871 906 929 1041 1741 Size: 238 208 179 246 35 23 112 700 Cuts at: 1741 1869 Size: 128 Fragments arranged by size: 700 246 238 208 179 128 112 35 23 BssHII G'CGCG_C Cuts at: 0 288 453 455 478 497 499 501 629 Size: 288 165 2 23 19 2 2 128 Cuts at: 629 631 663 867 918 961 1037 1124 1126 Size: 2 32 204 51 43 76 87 2 Cuts at: 1126 1201 1290 1869 Size: 75 89 579 Fragments arranged by size: 579 288 204 165 128 89 87 76 75 51 43 32 23 19 2 2 2 2 2 BstEII G'GTnAC_C Cuts at: 0 1234 1869 Size: 1234 635 BstYI r'GATC_y Cuts at: 0 1373 1869 Size: 1373 496 Bsu36I CC'TnA_GG Cuts at: 0 281 1869 Size: 281 1588 BtgI C'CryG_G Cuts at: 0 211 308 677 893 1106 1163 1247 1310 Size: 211 97 369 216 213 57 84 63 Cuts at: 1310 1340 1365 1423 1530 1640 1869 Size: 30 25 58 107 110 229 Fragments arranged by size: 369 229 216 213 211 110 107 97 84 63 58 57 30 25 BtsI GCAGTG_nn' Cuts at: 0 235 1581 1603 1869 Size: 235 1346 22 266 Fragments arranged by size: 1346 266 235 22 DraIII CAC_nnn'GTG Cuts at: 0 12 1869 Size: 12 1857 DrdI GACnn_nn'nnGTC Cuts at: 0 976 1869 Size: 976 893 EaeI y'GGCC_r Cuts at: 0 182 611 623 698 725 819 873 890 Size: 182 429 12 75 27 94 54 17 Cuts at: 890 974 998 1119 1160 1475 1589 1869 Size: 84 24 121 41 315 114 280 Fragments arranged by size: 429 315 280 182 121 114 94 84 75 54 41 27 24 17 12 EagI C'GGCC_G Cuts at: 0 819 873 974 998 1119 1475 1869 Size: 819 54 101 24 121 356 394 Fragments arranged by size: 819 394 356 121 101 54 24 EarI CTCTTCn'nnn_ Cuts at: 0 134 296 1087 1402 1869 Size: 134 162 791 315 467 Fragments arranged by size: 791 467 315 162 134 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 187 1869 Size: 187 1682 EcoICRI GAG'CTC Cuts at: 0 270 1869 Size: 270 1599 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 111 183 451 811 1194 1869 Size: 111 72 268 360 383 675 Fragments arranged by size: 675 383 360 268 111 72 EcoNI CCTnn'n_nnAGG Cuts at: 0 1195 1869 Size: 1195 674 EcoO109I rG'GnC_Cy Cuts at: 0 345 714 843 1111 1187 1305 1869 Size: 345 369 129 268 76 118 564 Fragments arranged by size: 564 369 345 268 129 118 76 HaeII r_GCGC'y Cuts at: 0 80 254 316 447 550 656 901 1105 Size: 80 174 62 131 103 106 245 204 Cuts at: 1105 1181 1281 1318 1334 1473 1682 1716 1780 Size: 76 100 37 16 139 209 34 64 Cuts at: 1780 1787 1865 1869 Size: 7 78 4 Fragments arranged by size: 245 209 204 174 139 131 106 103 100 80 78 76 64 62 37 34 16 7 4 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 259 291 337 369 1869 Size: 259 32 46 32 1500 Fragments arranged by size: 1500 259 46 32 32 KasI G'GCGC_C Cuts at: 0 76 250 312 443 652 1101 1314 1330 Size: 76 174 62 131 209 449 213 16 Cuts at: 1330 1678 1783 1861 1869 Size: 348 105 78 8 Fragments arranged by size: 449 348 213 209 174 131 105 78 76 62 16 8 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1160 1869 Size: 1160 709 MscI TGG'CCA Cuts at: 0 700 1591 1869 Size: 700 891 278 Fragments arranged by size: 891 700 278 MspA1I CmG'CkG Cuts at: 0 169 203 213 310 578 645 690 738 Size: 169 34 10 97 268 67 45 48 Cuts at: 738 895 1108 1172 1212 1301 1320 1425 1532 Size: 157 213 64 40 89 19 105 107 Cuts at: 1532 1661 1869 Size: 129 208 Fragments arranged by size: 268 213 208 169 157 129 107 105 97 89 67 64 48 45 40 34 19 10 NaeI GCC'GGC Cuts at: 0 240 448 627 873 908 931 1043 1743 Size: 240 208 179 246 35 23 112 700 Cuts at: 1743 1869 Size: 126 Fragments arranged by size: 700 246 240 208 179 126 112 35 23 NarI GG'CG_CC Cuts at: 0 77 251 313 444 653 1102 1315 1331 Size: 77 174 62 131 209 449 213 16 Cuts at: 1331 1679 1784 1862 1869 Size: 348 105 78 7 Fragments arranged by size: 449 348 213 209 174 131 105 78 77 62 16 7 NgoMIV G'CCGG_C Cuts at: 0 238 446 625 871 906 929 1041 1741 Size: 238 208 179 246 35 23 112 700 Cuts at: 1741 1869 Size: 128 Fragments arranged by size: 700 246 238 208 179 128 112 35 23 PasI CC'CwG_GG Cuts at: 0 34 1869 Size: 34 1835 PflMI CCAn_nnn'nTGG Cuts at: 0 789 888 1587 1598 1869 Size: 789 99 699 11 271 Fragments arranged by size: 789 699 271 99 11 PpuMI rG'GwC_Cy Cuts at: 0 345 714 843 1869 Size: 345 369 129 1026 Fragments arranged by size: 1026 369 345 129 PspOMI G'GGCC_C Cuts at: 0 1110 1304 1869 Size: 1110 194 565 Fragments arranged by size: 1110 565 194 PstI C_TGCA'G Cuts at: 0 106 644 1652 1869 Size: 106 538 1008 217 Fragments arranged by size: 1008 538 217 106 PvuII CAG'CTG Cuts at: 0 645 690 1172 1212 1869 Size: 645 45 482 40 657 Fragments arranged by size: 657 645 482 45 40 SacI G_AGCT'C Cuts at: 0 272 1869 Size: 272 1597 SacII CC_GC'GG Cuts at: 0 214 311 896 1109 1426 1533 1869 Size: 214 97 585 213 317 107 336 Fragments arranged by size: 585 336 317 214 213 107 97 SapI GCTCTTCn'nnn_ Cuts at: 0 296 1869 Size: 296 1573 SexAI A'CCwGG_T Cuts at: 0 422 1139 1869 Size: 422 717 730 Fragments arranged by size: 730 717 422 SfcI C'TryA_G Cuts at: 0 102 573 640 1648 1869 Size: 102 471 67 1008 221 Fragments arranged by size: 1008 471 221 102 67 SfiI GGCCn_nnn'nGGCC Cuts at: 0 1118 1643 1869 Size: 1118 525 226 Fragments arranged by size: 1118 525 226 SfoI GGC'GCC Cuts at: 0 78 252 314 445 654 1103 1316 1332 Size: 78 174 62 131 209 449 213 16 Cuts at: 1332 1680 1785 1863 1869 Size: 348 105 78 6 Fragments arranged by size: 449 348 213 209 174 131 105 78 78 62 16 6 SgrAI Cr'CCGG_yG Cuts at: 0 1041 1869 Size: 1041 828 SmaI CCC'GGG Cuts at: 0 48 369 392 1327 1729 1869 Size: 48 321 23 935 402 140 Fragments arranged by size: 935 402 321 140 48 23 SmlI C'TyrA_G Cuts at: 0 340 1411 1869 Size: 340 1071 458 Fragments arranged by size: 1071 458 340 StyI C'CwwG_G Cuts at: 0 1790 1869 Size: 1790 79 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 214 246 277 309 1435 1467 1869 Size: 214 32 31 32 1126 32 402 Fragments arranged by size: 1126 402 214 32 32 32 31 Tth111I GACn'n_nGTC Cuts at: 0 1141 1869 Size: 1141 728 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 675 1869 Size: 675 1194 XmaI C'CCGG_G Cuts at: 0 46 367 390 1325 1727 1869 Size: 46 321 23 935 402 142 Fragments arranged by size: 935 402 321 142 46 23 ZraI GAC'GTC Cuts at: 0 1797 1869 Size: 1797 72 Enzymes that do cut: AarI AatII AccI AcuI AfeI AflIII AhdI AlwNI ApaI AscI AvaI BanI BanII BbeI BbsI BbvCI BcgI BglI BglII BlpI Bme1580I BmgBI BpmI Bpu10I BpuEI BsaAI BsaHI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspHI BspMI BsrBI BsrFI BssHII BstEII BstYI Bsu36I BtgI BtsI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I HaeII Hin4I KasI MmeI MscI MspA1I NaeI NarI NgoMIV PasI PflMI PpuMI PspOMI PstI PvuII SacI SacII SapI SexAI SfcI SfiI SfoI SgrAI SmaI SmlI StyI TstI Tth111I XcmI XmaI ZraI Enzymes that do not cut: Acc65I AclI AflII AgeI AleI AlfI AloI ApaLI ApoI AseI AsiSI AvrII BaeI BamHI BciVI BclI BfrBI BmrI BmtI BplI BsaI BsaBI BsaWI BsiWI BsmI BsmBI BspEI BsrDI BsrGI BssSI BstAPI BstBI BstXI BstZ17I BtgZI ClaI CspCI DraI EcoRI EcoRV FalI FseI FspI FspAI HincII HindIII HpaI KpnI MfeI MluI MslI NcoI NdeI NheI NotI NruI NsiI NspI PacI PciI PfoI PmeI PmlI PpiI PshAI PsiI PspXI PsrI PvuI RsrII SalI SanDI SbfI ScaI SgfI SnaBI SpeI SphI SrfI SspI StuI SwaI TaqII TatI XbaI XhoI XmnI