FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5707, 654 aa 1>>>pF1KE5707 654 - 654 aa - 654 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6102+/-0.000909; mu= 13.2623+/- 0.055 mean_var=88.0743+/-17.750, 0's: 0 Z-trim(107.9): 21 B-trim: 43 in 1/50 Lambda= 0.136663 statistics sampled from 9886 (9895) to 9886 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.304), width: 16 Scan time: 3.090 The best scores are: opt bits E(32554) CCDS33719.1 NGLY1 gene_id:55768|Hs108|chr3 ( 654) 4409 879.5 0 CCDS46777.1 NGLY1 gene_id:55768|Hs108|chr3 ( 612) 4152 828.8 0 CCDS46779.1 NGLY1 gene_id:55768|Hs108|chr3 ( 558) 3649 729.6 2.7e-210 CCDS46778.1 NGLY1 gene_id:55768|Hs108|chr3 ( 636) 2248 453.4 4.4e-127 >>CCDS33719.1 NGLY1 gene_id:55768|Hs108|chr3 (654 aa) initn: 4409 init1: 4409 opt: 4409 Z-score: 4697.5 bits: 879.5 E(32554): 0 Smith-Waterman score: 4409; 100.0% identity (100.0% similar) in 654 aa overlap (1-654:1-654) 10 20 30 40 50 60 pF1KE5 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 ARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSL 550 560 570 580 590 600 610 620 630 640 650 pF1KE5 HSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 HSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL 610 620 630 640 650 >>CCDS46777.1 NGLY1 gene_id:55768|Hs108|chr3 (612 aa) initn: 4152 init1: 4152 opt: 4152 Z-score: 4424.1 bits: 828.8 E(32554): 0 Smith-Waterman score: 4152; 99.8% identity (100.0% similar) in 612 aa overlap (43-654:1-612) 20 30 40 50 60 70 pF1KE5 ASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTAFSTRLLPVRGAV .::::::::::::::::::::::::::::: CCDS46 MRNPNDEKYRSIRIGNTAFSTRLLPVRGAV 10 20 30 80 90 100 110 120 130 pF1KE5 ECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSHKVKSSQQPAAST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSHKVKSSQQPAAST 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE5 QLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQHVLVYENPALQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQHVLVYENPALQE 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE5 KALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEEFFHWVNNVLCSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEEFFHWVNNVLCSK 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE5 CGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEKLLETRCGRCGEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 CGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEKLLETRCGRCGEW 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE5 ANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCDKPLLYEIGWGKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCDKPLLYEIGWGKK 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE5 LSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQRQLFLSENRRKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQRQLFLSENRRKE 340 350 360 370 380 390 440 450 460 470 480 490 pF1KE5 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETLFIPCENEKISKQ 400 410 420 430 440 450 500 510 520 530 540 550 pF1KE5 LHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYLARKEGSSFAYIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYLARKEGSSFAYIS 460 470 480 490 500 510 560 570 580 590 600 610 pF1KE5 WKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSLHSYADFSGATEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 WKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSLHSYADFSGATEV 520 530 540 550 560 570 620 630 640 650 pF1KE5 ILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL :::::::::::::::::::::::::::::::::::::::::: CCDS46 ILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL 580 590 600 610 >>CCDS46779.1 NGLY1 gene_id:55768|Hs108|chr3 (558 aa) initn: 3678 init1: 3649 opt: 3649 Z-score: 3888.8 bits: 729.6 E(32554): 2.7e-210 Smith-Waterman score: 3649; 99.8% identity (100.0% similar) in 538 aa overlap (1-538:1-538) 10 20 30 40 50 60 pF1KE5 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KPLLYEIGWGKKLSYVIAFSKDEVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNKQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKETL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::. CCDS46 FIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMITV 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 ARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNSL CCDS46 FTPMLIFLVPLKLFWKQN 550 >>CCDS46778.1 NGLY1 gene_id:55768|Hs108|chr3 (636 aa) initn: 4033 init1: 2248 opt: 2248 Z-score: 2395.1 bits: 453.4 E(32554): 4.4e-127 Smith-Waterman score: 3996; 93.7% identity (94.5% similar) in 655 aa overlap (1-654:1-636) 10 20 30 40 50 60 pF1KE5 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAAALGSSSGSASPAVAELCQNTPETFLEASKLLLTYADNILRNPNDEKYRSIRIGNTA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 FSTRLLPVRGAVECLFEMGFEEGETHLIFPKKASVEQLQKIRDLIAIERSSRLDGSNKSH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KVKSSQQPAASTQLPTTPSSNPSGLNQHTRNRQGQSSDPPSASTVAADSAILEVLQSNIQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 HVLVYENPALQEKALACIPVQELKRKSQEKLSRARKLDKGINISDEDFLLLELLHWFKEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 FFHWVNNVLCSKCGGQTRSRDRSLLPSDDELKWGAKEVEDHYCDACQFSNRFPRYNNPEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTDHVWTEVYSPSQQRWLHCDACEDVCD ::::::::::::::::::::::::::::::::::. :: : CCDS46 LLETRCGRCGEWANCFTLCCRAVGFEARYVWDYTE----------LQRTLSLKLTT---- 310 320 330 340 370 380 390 400 410 pF1KE5 KPLLYEIGWGKKLSYVIAFSKD-EVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNK : :: :: . . .: .:::::::::::::::::::::::::::::::::::: CCDS46 ---LKEI--GKTFLRISKRQKLIQVVDVTWRYSCKHEEVIARRTKVKEALLRDTINGLNK 350 360 370 380 390 400 420 430 440 450 460 470 pF1KE5 QRQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 QRQLFLSENRRKELLQRIIVELVEFISPKTPKPGELGGRISGSVAWRVARGEMGLQRKET 410 420 430 440 450 460 480 490 500 510 520 530 pF1KE5 LFIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LFIPCENEKISKQLHLCYNIVKDRYVRVSNNNQTISGWENGVWKMESIFRKVETDWHMVY 470 480 490 500 510 520 540 550 560 570 580 590 pF1KE5 LARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQTGTVEWKLRSDTAQVELTGDNS 530 540 550 560 570 580 600 610 620 630 640 650 pF1KE5 LHSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LHSYADFSGATEVILEAELSRGDGDVAWQHTQLFRQSLNDHEENCLEIIIKFSDL 590 600 610 620 630 654 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:57:47 2016 done: Tue Nov 8 05:57:47 2016 Total Scan time: 3.090 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]