FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5638, 547 aa 1>>>pF1KE5638 547 - 547 aa - 547 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4744+/-0.000992; mu= -3.1058+/- 0.060 mean_var=262.2046+/-52.390, 0's: 0 Z-trim(114.2): 27 B-trim: 44 in 1/51 Lambda= 0.079205 statistics sampled from 14725 (14747) to 14725 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.453), width: 16 Scan time: 4.120 The best scores are: opt bits E(32554) CCDS2476.1 SP110 gene_id:3431|Hs108|chr2 ( 549) 3610 425.5 8e-119 CCDS54435.1 SP110 gene_id:3431|Hs108|chr2 ( 555) 3610 425.5 8.1e-119 CCDS2474.1 SP110 gene_id:3431|Hs108|chr2 ( 689) 3483 411.0 2.3e-114 CCDS2475.1 SP110 gene_id:3431|Hs108|chr2 ( 713) 3483 411.0 2.3e-114 CCDS63149.1 SP140 gene_id:11262|Hs108|chr2 ( 753) 494 69.5 1.6e-11 >>CCDS2476.1 SP110 gene_id:3431|Hs108|chr2 (549 aa) initn: 2182 init1: 1979 opt: 3610 Z-score: 2246.7 bits: 425.5 E(32554): 8e-119 Smith-Waterman score: 3610; 98.9% identity (98.9% similar) in 549 aa overlap (1-547:1-549) 10 20 30 40 50 60 pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQSRDTPIL ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: CCDS24 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLP-- :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE5 RKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE5 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI 490 500 510 520 530 540 540 pF1KE5 NLKRELNSK ::::::::: CCDS24 NLKRELNSK >>CCDS54435.1 SP110 gene_id:3431|Hs108|chr2 (555 aa) initn: 2182 init1: 1979 opt: 3610 Z-score: 2246.6 bits: 425.5 E(32554): 8.1e-119 Smith-Waterman score: 3610; 98.9% identity (98.9% similar) in 549 aa overlap (1-547:7-555) 10 20 30 40 50 pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEA :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MGRGFRMFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEA 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 CRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: CCDS54 CRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQS 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 RDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RDTPILLEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 SPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRD 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 KEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKK 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 KSLP--RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDG :::: : ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KSLPGGTASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDG 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQK 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE5 ARTKCARKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGI :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ARTKCARKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGI 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE5 LYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLL 490 500 510 520 530 540 540 pF1KE5 LCPPRINLKRELNSK ::::::::::::::: CCDS54 LCPPRINLKRELNSK 550 >>CCDS2474.1 SP110 gene_id:3431|Hs108|chr2 (689 aa) initn: 2182 init1: 1979 opt: 3483 Z-score: 2166.8 bits: 411.0 E(32554): 2.3e-114 Smith-Waterman score: 3483; 98.9% identity (98.9% similar) in 530 aa overlap (1-528:1-530) 10 20 30 40 50 60 pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQSRDTPIL ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: CCDS24 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLP-- :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE5 RKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE5 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRKNSDECEVC 490 500 510 520 530 540 540 pF1KE5 NLKRELNSK CCDS24 CQGGQLLCCGTCPRVFHEDCHIPPVEAKRMLWSCTFCRMKRSSGSQQCHHVSKTLERQMQ 550 560 570 580 590 600 >>CCDS2475.1 SP110 gene_id:3431|Hs108|chr2 (713 aa) initn: 2182 init1: 1979 opt: 3483 Z-score: 2166.6 bits: 411.0 E(32554): 2.3e-114 Smith-Waterman score: 3483; 98.9% identity (98.9% similar) in 530 aa overlap (1-528:1-530) 10 20 30 40 50 60 pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLDNSIITKRMYMESLEACRNLIP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYERQSRDTPIL ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: CCDS24 VSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTIYRSFKRVGASYEWQSRDTPIL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LEAPTGLAEGSSLHTPLALPPPQPPQPSCSPCAPRVSEPGTSSQQSDEILSESPSPSDPV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 LPLPALIQEGRSTSVTNDKLTSKMNAEEDSEEMPSLLTSTVQVASDNLIPQIRDKEDPQE 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLP-- :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MPHSPLGSMPEIRDNSPEPNDPEEPQEVSSTPSDKKGKKRKRCIWSTPKRRHKKKSLPGG 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 RALSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE : ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TASSRHGIQKKLKRVDQVPQKKDDSTCNSTVETRAQKARTECARKSRSEEIIDGTSEMNE 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 GKRSQKTPSTPRRVTQGAASPGHGIQEKLQVVDKVTQRKDDSTWNSEVMMRVQKARTKCA 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE5 RKSRSKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 RKSRLKEKKKEKDICSSSKRRFQKNIHRRGKPKSDTVDFHCSKLPVTCGEAKGILYKKKM 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE5 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRI :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 KHGSSVKCIRNEDGTWLTPNEFEVEGKGRNAKNWKRNIRCEGMTLGELLKRKNSDECEVC 490 500 510 520 530 540 540 pF1KE5 NLKRELNSK CCDS24 CQGGQLLCCGTCPRVFHEDCHIPPVEAKRMLWSCTFCRMKRSSGSQQCHHVSKTLERQMQ 550 560 570 580 590 600 >>CCDS63149.1 SP140 gene_id:11262|Hs108|chr2 (753 aa) initn: 755 init1: 333 opt: 494 Z-score: 320.3 bits: 69.5 E(32554): 1.6e-11 Smith-Waterman score: 813; 32.7% identity (58.4% similar) in 548 aa overlap (10-543:40-557) 10 20 30 pF1KE5 MFTMTRAMEEALFQHFMHQKLGIAYAIHKPFPFFEGLLD : .:. : ..:. :: :: .::::. :: : CCDS63 MASGDSNLNFRMVAEIQNVEGQNLQEQVCPEPIFRFFRENKVEIASAITRPFPFLMGLRD 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE5 NSIITKRMYMESLEACRNLIPVSRVVHNILTQLERTFNLSLLVTLFSQINLREYPNLVTI :.:...:: . :: :::.::.::.. .:..::.::. : : .:::.::: ::.: : CCDS63 RSFISEQMYEHFQEAFRNLVPVTRVMYCVLSELEKTFGWSHLEALFSRINLMAYPDLNEI 70 80 90 100 110 120 100 110 120 130 140 pF1KE5 YRSFKRVGASYERQS---------RDTPILLEAPTGLAEGSSL-HTPLALPPPQPPQPSC ::::. : ::.. .: : :: : : :.:. : . :: : CCDS63 YRSFQNV--CYEHSPLQMNNVNDLEDRPRLL--PYGKQENSNACHEMDDIAVPQEALSSS 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE5 SPCAPRVSEPGTSSQQSDEILSESPSPSDPVLPLPALIQEGRSTSVTNDKLTSKMNAEED : ::: ::.. ... . . .: . :.:. . . .. : : . CCDS63 PRC-----EPGFSSESCEQLALPKAGGGD-AEDAPSLLPVSCKLAIQID--------EGE 190 200 210 220 230 210 220 230 240 250 260 pF1KE5 SEEMPSLLTSTVQVASDNLIPQIRDKEDPQEMPHSPLGSMPEIRDNSPEPNDPEEPQEVS :::::.:: .. . : ::. .. .:.. : : :. : : :: ::.: CCDS63 SEEMPKLLPYDTEETFDLKTPQVTNEGEPEKGLCLLPGEGEEGSDDCSEMCDGEERQEAS 240 250 260 270 280 290 270 280 290 300 310 320 pF1KE5 STPSDKKGKKRKRCIWSTPKRRHKKKSLPRALSRHGIQKKLKRVDQVPQKKDDSTCNSTV :. . ..:. .. ... ... : .: .. . . . .: . : : CCDS63 SSLA-RRGSVSSELENHPMNEEGESEELASSLLYDNVPGAEQSAYE-NEKCSCVMCFSEE 300 310 320 330 340 330 340 350 360 370 380 pF1KE5 ETRAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGIQEKLQV . .:::: . . . .: ... . :: :. :: .: :: .. . CCDS63 VPGSPEARTESDQACGTMDTVDIANNSTLGK-----PKRKRRKKRG-----HGWSRMRMR 350 360 370 380 390 390 400 410 420 430 440 pF1KE5 VDKVTQRKDDSTWNSEVMMRVQKART--KCARKSRSKEKKKEKDICSSSKRRFQKNIHRR .. .:..:.: ...:. .:: . : : :.... : ..: : :: .. : CCDS63 RQENSQQNDNSKADGQVVSSEKKANVNLKDLSKIRGRKRGKPGTRFTQSDRAAQKRVRSR 400 410 420 430 440 450 450 460 470 480 490 500 pF1KE5 G--KPKSDTVDFHCSKLPVTCGEAKGILYKKKMKHGSSVKCIRNEDGTWLTPNEFEVEGK . : :..::::. :::::: .::::.:::...: ::::..::: :.::.:::..: CCDS63 ASRKHKDETVDFKAPLLPVTCGGVKGILHKKKLQQGILVKCIQTEDGKWFTPTEFEIKGG 460 470 480 490 500 510 510 520 530 540 pF1KE5 GRNAKNWKRNIRCEGMTLGELLKSGLLLCPPRINLKRELNSK .:::. ..:: : : :...:.: :::: ... CCDS63 HARSKNWRLSVRCGGWPLRWLMENGFLPDPPRIRYRKKKRILKSQNNSSVDPCMRNLDEC 520 530 540 550 560 570 CCDS63 EVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTPWNCIFCRMKESPGSQQCCQESEVLER 580 590 600 610 620 630 547 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:25:50 2016 done: Tue Nov 8 05:25:51 2016 Total Scan time: 4.120 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]