FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5083, 977 aa 1>>>pF1KE5083 977 - 977 aa - 977 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.2105+/-0.000949; mu= 6.3794+/- 0.058 mean_var=280.8950+/-57.900, 0's: 0 Z-trim(114.4): 33 B-trim: 0 in 0/52 Lambda= 0.076525 statistics sampled from 14981 (15002) to 14981 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.461), width: 16 Scan time: 4.240 The best scores are: opt bits E(32554) CCDS822.1 RBM15 gene_id:64783|Hs108|chr1 ( 977) 6559 738.2 1.8e-212 CCDS59198.1 RBM15 gene_id:64783|Hs108|chr1 ( 969) 6412 722.0 1.4e-207 CCDS33764.1 RBM15B gene_id:29890|Hs108|chr3 ( 890) 1438 172.8 2.7e-42 >>CCDS822.1 RBM15 gene_id:64783|Hs108|chr1 (977 aa) initn: 6559 init1: 6559 opt: 6559 Z-score: 3927.9 bits: 738.2 E(32554): 1.8e-212 Smith-Waterman score: 6559; 100.0% identity (100.0% similar) in 977 aa overlap (1-977:1-977) 10 20 30 40 50 60 pF1KE5 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE5 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQI 910 920 930 940 950 960 970 pF1KE5 GVRYENKKRENLALTLL ::::::::::::::::: CCDS82 GVRYENKKRENLALTLL 970 >>CCDS59198.1 RBM15 gene_id:64783|Hs108|chr1 (969 aa) initn: 6412 init1: 6412 opt: 6412 Z-score: 3840.2 bits: 722.0 E(32554): 1.4e-207 Smith-Waterman score: 6412; 100.0% identity (100.0% similar) in 954 aa overlap (1-954:1-954) 10 20 30 40 50 60 pF1KE5 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MRTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRGDDLRRPATMKGKERSPVKAKRSRG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 GEDSTSRGERSKKLGGSGGSNGSSSGKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 SRLHSYSSPSTKNSSGGGESRSSSRGGGGESRSSGAASSAPGGGDGAEYKTLKISELGSQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAKHARGRLVL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 YDRPLKIEAVYVSRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGGGQRSLSPGGAAL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 GYRDYRLQQLALGRLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFRE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 VDEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 FENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 IRTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEHRYQQQYLQP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LPLTHYELVTDAFGHRAPDPLRGARDRTPPLLYRDRDRDLYPDSDWVPPPPPVRERSTRT 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AATSVPAYEPLDSLDRRRDGWSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDRSPESD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 RPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGDKRDRK 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 NSASAERDRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSKLKSPSQKQDGGTAPVASA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 SPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLKITQRLRLDQP 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 KLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRNLVSYLKQKQA 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE5 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRGFGFQI :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVMIIVRAKLVEQ 910 920 930 940 950 960 970 pF1KE5 GVRYENKKRENLALTLL CCDS59 RMKIWNSKL >>CCDS33764.1 RBM15B gene_id:29890|Hs108|chr3 (890 aa) initn: 1852 init1: 892 opt: 1438 Z-score: 872.9 bits: 172.8 E(32554): 2.7e-42 Smith-Waterman score: 2147; 45.8% identity (66.4% similar) in 934 aa overlap (59-954:14-887) 30 40 50 60 70 80 pF1KE5 RRVTQLRGDDLRRPATMKGKERSPVKAKRSRGGEDSTSRG---ERSKKLGGSGGSNGSSS ::. .:..: :: . :: ... .:. CCDS33 MKRQSERDSSPSGRGSSSSAKRPREREREAEAGGRRAAHKASG 10 20 30 40 90 100 110 120 130 140 pF1KE5 GKTDSGGGSRRSLHLDKSSSRGGSREYDTGGGSSSSRLHSYSSPSTKNSSGG-GESRSSS : . :. ..:. :: :. : :... : : : .. ..:: : . :.. CCDS33 GAKHPVPARARDKPRGSGSGGGGHRD-GRGTGDANHRASSGRSSGSGAGGGGRGGKASGD 50 60 70 80 90 100 150 160 170 180 190 pF1KE5 RGGGGES-RSS---------GAASSAPGGGDGA-EYKTLKISELGSQLSDEAVEDGLFHE :..: : :.: :: . ::.. .: ::::: :: :. : : .:: :::. CCDS33 PGASGMSPRASPLPPPPPPPGAEPACPGSSAAAPEYKTLLISSLSPALPAEHLEDRLFHQ 110 120 130 140 150 160 200 210 220 230 240 250 pF1KE5 FKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDARAAK-HARGR-LVLYDRPLKIEAVY :::::..:...:: : :::.::::.:.::: :. :: .: :.:::::::.: :: CCDS33 FKRFGEISLRLSHTPELG----RVAYVNFRHPQDAREARQHALARQLLLYDRPLKVEPVY 170 180 190 200 210 260 270 280 290 300 pF1KE5 V------SRRRSRSPLDKDTYPPSASVVGASVGGHRHPPGGGG---GQRSLSPGGAALGY . ::: : : .: ::. . . .: . : :: :::::: :: CCDS33 LRGGGGSSRRSSSSSAAASTPPPGPPAPADPLG---YLPLHGGYQYKQRSLSPV-AAPPL 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE5 RDYRLQQLALG-RLPPPPPPPLPRDLERERDYPFYERVRPAYSLEPRVGAGAGAAPFREV :. : .. : . : . . :: :: :.: : : : CCDS33 REPRARHAAAAFALDAAAAAAVGLSRERALDY---------YGLYDDRGRPYGYPAVCEE 280 290 300 310 320 370 380 390 400 410 420 pF1KE5 DEISPEDDQRANRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKF : . :::::::.:.::.:::: .:.: .:::::...:.: :: ::::.::: ..:.:::: CCDS33 D-LMPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKF 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE5 ENLDMSHRAKLAMSGKIIIRNPIKIGYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTI .::::.::::.::::..: :::::::::::.:::::::::::: . ::::::::::::.: CCDS33 QNLDMAHRAKVAMSGRVIGRNPIKIGYGKANPTTRLWVGGLGPNTSLAALAREFDRFGSI 390 400 410 420 430 440 490 500 510 520 530 540 pF1KE5 RTIDYRKGDSWAYIQYESLDAAHAAWTHMRGFPLGGPDRRLRVDFADTEH-RYQQQYLQP ::::. ::::.:::::::::::.:: ..:::::::::::::::::: .:. :: ::: :: CCDS33 RTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKAEETRYPQQY-QP 450 460 470 480 490 500 550 560 570 580 590 pF1KE5 LPL-THYELVTDAFG-HRAPDPLRGARDRTPP-LLYRDRDRDLYPDSDWVPPPPPVRERS :: .::::.::.. :: : .:::::: ::: :::: . ..::. : .:. CCDS33 SPLPVHYELLTDGYTRHRNLDA-DLVRDRTPPHLLYSDRDRTFL-EGDWTSPSKSSDRRN 510 520 530 540 550 560 600 610 620 630 640 650 pF1KE5 TRTAATSVPAYEPLDSLDRRRDG--WSLDRDRGDRDLPSSRDQPRKRRLPEESGGRHLDR :. .: :. : :.: :. : ::: ::. .. :::: CCDS33 ------SLEGYS--RSV-RSRSGERWGAD---GDRGLPKPWEERRKRR------------ 570 580 590 660 670 680 690 700 710 pF1KE5 SPESDRPRKRHCAPSPDRSPELSSSRDRYNSDNDRSSRLLLERPSPIRDRRGSLEKSQGD : ::: : : .: .:: . ..: .. . .::. : :.:. . ..:.: CCDS33 SLSSDRGRTTH-SPYEERS-RTKGSGQQSERGSDRT---------PERSRKEN-HSSEGT 600 610 620 630 640 720 730 740 750 760 770 pF1KE5 KRDRKNSASAER----DRKHRTTAPTEGKSPLKKEDRSDGSAPSTSTASSK-LKSPSQKQ :.. .:: : : .: :. . : :. :.. :. : : :. : ... CCDS33 KESSSNSLSNSRHGAEERGHHHHHHEAADSSHGKKARDSERNHRTTEAEPKPLEEP-KHE 650 660 670 680 690 700 780 790 800 810 820 830 pF1KE5 DGGTAPVASASPKLCLAWQGMLLLKNSNFPSNMHLLQGDLQVASSLLVEGSTGGKVAQLK .. . : :.:.:.:.:::: ::..::.:.:: : :::: . ..:.:..::: CCDS33 TKKLKNLSEYAQTLQLGWNGLLVLKNSCFPTSMHILEGDQGVISSLLKDHTSGSKLTQLK 710 720 730 740 750 760 840 850 860 870 880 890 pF1KE5 ITQRLRLDQPKLDEVTRRIKVAGPNGYAILLAVPGSSDSRSSSSSAASDTATSTQRPLRN :.:::::::::::::::::: ..:::::.:::. .. .. .. . . . . . .: ::: CCDS33 IAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQATPSGLGTEGMPTVEPGLQ-RRLLRN 770 780 790 800 810 820 900 910 920 930 940 950 pF1KE5 LVSYLKQKQAAGVISLPVGGNKDKENTGVLHAFPPCEFSQQFLDSPAKALAKSEEDYLVM ::::::::::::::::::::.: ...::.:.:::::.::::.:.: ..:.: ::...:. CCDS33 LVSYLKQKQAAGVISLPVGGSKGRDGTGMLYAFPPCDFSQQYLQSALRTLGKLEEEHMVI 830 840 850 860 870 880 960 970 pF1KE5 IIVRGFGFQIGVRYENKKRENLALTLL .::: CCDS33 VIVRDTA 890 977 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:51:53 2016 done: Tue Nov 8 04:51:54 2016 Total Scan time: 4.240 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]