FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5057, 192 aa 1>>>pF1KE5057 192 - 192 aa - 192 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7877+/-0.000827; mu= 15.6143+/- 0.049 mean_var=58.9344+/-12.252, 0's: 0 Z-trim(106.1): 25 B-trim: 3 in 1/45 Lambda= 0.167067 statistics sampled from 8774 (8778) to 8774 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.27), width: 16 Scan time: 1.930 The best scores are: opt bits E(32554) CCDS33281.1 TMEM37 gene_id:140738|Hs108|chr2 ( 190) 1256 310.8 3.3e-85 >>CCDS33281.1 TMEM37 gene_id:140738|Hs108|chr2 (190 aa) initn: 799 init1: 799 opt: 1256 Z-score: 1643.2 bits: 310.8 E(32554): 3.3e-85 Smith-Waterman score: 1256; 98.4% identity (99.0% similar) in 192 aa overlap (1-192:1-190) 10 20 30 40 50 60 pF1KE5 MTAVGVQAQRPLGQRQPRRSFFESFIRTLIITCVALAVVLSSVSICDGHWLLAEDRLFGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MTAVGVQAQRPLGQRQPRRSFFESFIRTLIITCVALAVVLSSVSICDGHWLLAEDRLFGL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 WHFCTTTNQSVPICFRDLGQAHVPGLAVGMGLVRSVGALAVVAAIFGLEFLMVSQLCEDK :::::::::. :::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 WHFCTTTNQT--ICFRDLGQAHVPGLAVGMGLVRSVGALAVVAAIFGLEFLMVSQLCEDK 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 HSQCKWVMGSILLLVSFVLSSGGLLGFVILLRNQVTLIGFTLMFWCEFTASFLLFLNAIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 HSQCKWVMGSILLLVSFVLSSGGLLGFVILLRNQVTLIGFTLMFWCEFTASFLLFLNAIS 120 130 140 150 160 170 190 pF1KE5 GLHINSITHPWE :::::::::::: CCDS33 GLHINSITHPWE 180 190 192 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:36:38 2016 done: Tue Nov 8 04:36:38 2016 Total Scan time: 1.930 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]