Result of FASTA (omim) for
pFN21AE5020
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5020, 374 aa
1>>>pF1KE5020 374 - 374 aa - 374 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6088+/-0.000367; mu= 15.3496+/- 0.023
mean_var=77.4356+/-15.902, 0's: 0 Z-trim(113.4): 52 B-trim: 1274 in 1/54
Lambda= 0.145748
statistics sampled from 22701 (22760) to 22701 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.267), width: 16
Scan time: 7.290
The best scores are: opt bits E(85289)
NP_001269463 (OMIM: 605874,612292) potassium chann ( 374) 2488 532.8 5e-151
XP_011515404 (OMIM: 605874,612292) PREDICTED: pota ( 374) 2488 532.8 5e-151
XP_011515403 (OMIM: 605874,612292) PREDICTED: pota ( 401) 1884 405.8 9e-113
XP_016869020 (OMIM: 605874,612292) PREDICTED: pota ( 264) 1773 382.3 6.8e-106
XP_016869019 (OMIM: 605874,612292) PREDICTED: pota ( 264) 1773 382.3 6.8e-106
NP_002237 (OMIM: 603220,615344) potassium channel ( 394) 1329 289.1 1.2e-77
XP_011515405 (OMIM: 605874,612292) PREDICTED: pota ( 291) 1169 255.4 1.3e-67
NP_071753 (OMIM: 607368) potassium channel subfami ( 330) 1104 241.7 1.8e-63
XP_005264350 (OMIM: 603220,615344) PREDICTED: pota ( 284) 809 179.7 7.5e-45
XP_011535142 (OMIM: 605873) PREDICTED: potassium c ( 410) 389 91.4 3.9e-18
NP_066984 (OMIM: 605873) potassium channel subfami ( 538) 389 91.5 4.9e-18
NP_612191 (OMIM: 605873) potassium channel subfami ( 543) 389 91.5 4.9e-18
NP_612190 (OMIM: 605873) potassium channel subfami ( 543) 389 91.5 4.9e-18
NP_003731 (OMIM: 603493) potassium channel subfami ( 499) 388 91.3 5.3e-18
XP_005249513 (OMIM: 603493) PREDICTED: potassium c ( 496) 384 90.4 9.4e-18
XP_016883492 (OMIM: 607368) PREDICTED: potassium c ( 218) 377 88.7 1.3e-17
NP_001128578 (OMIM: 607369) potassium channel subf ( 294) 374 88.2 2.6e-17
NP_115491 (OMIM: 607369) potassium channel subfami ( 309) 374 88.2 2.8e-17
XP_011507824 (OMIM: 603219) PREDICTED: potassium c ( 370) 373 88.0 3.7e-17
XP_011507826 (OMIM: 603219) PREDICTED: potassium c ( 370) 373 88.0 3.7e-17
XP_011507825 (OMIM: 603219) PREDICTED: potassium c ( 370) 373 88.0 3.7e-17
NP_055032 (OMIM: 603219) potassium channel subfami ( 411) 373 88.1 4e-17
XP_016856738 (OMIM: 603219) PREDICTED: potassium c ( 412) 373 88.1 4e-17
NP_001017424 (OMIM: 603219) potassium channel subf ( 422) 373 88.1 4.1e-17
XP_016856737 (OMIM: 603219) PREDICTED: potassium c ( 422) 373 88.1 4.1e-17
NP_001017425 (OMIM: 603219) potassium channel subf ( 426) 373 88.1 4.1e-17
NP_002236 (OMIM: 601745) potassium channel subfami ( 336) 366 86.5 9.5e-17
NP_001304019 (OMIM: 605720) potassium channel subf ( 393) 360 85.3 2.6e-16
NP_201567 (OMIM: 605720) potassium channel subfami ( 393) 360 85.3 2.6e-16
XP_011513237 (OMIM: 607369) PREDICTED: potassium c ( 197) 356 84.3 2.6e-16
NP_001128579 (OMIM: 607369) potassium channel subf ( 262) 356 84.4 3.3e-16
XP_016866835 (OMIM: 607369) PREDICTED: potassium c ( 262) 356 84.4 3.3e-16
NP_001128577 (OMIM: 607369) potassium channel subf ( 322) 353 83.8 6.1e-16
NP_004814 (OMIM: 603939) potassium channel subfami ( 313) 351 83.4 8e-16
NP_113648 (OMIM: 607370) potassium channel subfami ( 332) 339 80.9 4.8e-15
NP_001128583 (OMIM: 607370) potassium channel subf ( 271) 318 76.4 8.7e-14
XP_011542486 (OMIM: 601745) PREDICTED: potassium c ( 268) 315 75.8 1.3e-13
NP_071337 (OMIM: 607367) potassium channel subfami ( 408) 285 69.6 1.5e-11
NP_862823 (OMIM: 613655,613656) potassium channel ( 384) 243 60.7 6.4e-09
NP_203133 (OMIM: 603940) potassium channel subfami ( 307) 221 56.0 1.3e-07
NP_203134 (OMIM: 603940) potassium channel subfami ( 252) 219 55.6 1.5e-07
NP_258416 (OMIM: 603940) potassium channel subfami ( 252) 219 55.6 1.5e-07
NP_005705 (OMIM: 603940) potassium channel subfami ( 257) 219 55.6 1.5e-07
NP_071338 (OMIM: 607366) potassium channel subfami ( 430) 212 54.2 6.5e-07
XP_011525828 (OMIM: 603939) PREDICTED: potassium c ( 179) 179 47.1 3.9e-05
XP_006715298 (OMIM: 603493) PREDICTED: potassium c ( 317) 162 43.6 0.00074
>>NP_001269463 (OMIM: 605874,612292) potassium channel s (374 aa)
initn: 2488 init1: 2488 opt: 2488 Z-score: 2832.4 bits: 532.8 E(85289): 5e-151
Smith-Waterman score: 2488; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KE5 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 LVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHS
310 320 330 340 350 360
370
pF1KE5 FTDHQRLMKRRKSV
::::::::::::::
NP_001 FTDHQRLMKRRKSV
370
>>XP_011515404 (OMIM: 605874,612292) PREDICTED: potassiu (374 aa)
initn: 2488 init1: 2488 opt: 2488 Z-score: 2832.4 bits: 532.8 E(85289): 5e-151
Smith-Waterman score: 2488; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KE5 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 LVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHS
310 320 330 340 350 360
370
pF1KE5 FTDHQRLMKRRKSV
::::::::::::::
XP_011 FTDHQRLMKRRKSV
370
>>XP_011515403 (OMIM: 605874,612292) PREDICTED: potassiu (401 aa)
initn: 1884 init1: 1884 opt: 1884 Z-score: 2145.6 bits: 405.8 E(85289): 9e-113
Smith-Waterman score: 1884; 100.0% identity (100.0% similar) in 285 aa overlap (1-285:1-285)
10 20 30 40 50 60
pF1KE5 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 LVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCT
:::::::::::::::::::::::::::::::::::::::::::::
XP_011 LVVLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEPRPSRPRGTNCTFKRGVRGCWV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 CYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHS
XP_011 SLPKPNTASGFLPSQVDLCCAGRMLYSFPYTTVGMVQLHIDRKPRETLDVRVPASPSGSF
310 320 330 340 350 360
>>XP_016869020 (OMIM: 605874,612292) PREDICTED: potassiu (264 aa)
initn: 1773 init1: 1773 opt: 1773 Z-score: 2022.1 bits: 382.3 E(85289): 6.8e-106
Smith-Waterman score: 1773; 100.0% identity (100.0% similar) in 264 aa overlap (111-374:1-264)
90 100 110 120 130 140
pF1KE5 AGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLL
::::::::::::::::::::::::::::::
XP_016 MFYAVLGIPLTLVMFQSLGERMNTFVRYLL
10 20 30
150 160 170 180 190 200
pF1KE5 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE5 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE5 RASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCTCYRSQDYGGRSVAPQNSFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCTCYRSQDYGGRSVAPQNSFSA
160 170 180 190 200 210
330 340 350 360 370
pF1KE5 KLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHSFTDHQRLMKRRKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHSFTDHQRLMKRRKSV
220 230 240 250 260
>>XP_016869019 (OMIM: 605874,612292) PREDICTED: potassiu (264 aa)
initn: 1773 init1: 1773 opt: 1773 Z-score: 2022.1 bits: 382.3 E(85289): 6.8e-106
Smith-Waterman score: 1773; 100.0% identity (100.0% similar) in 264 aa overlap (111-374:1-264)
90 100 110 120 130 140
pF1KE5 AGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLL
::::::::::::::::::::::::::::::
XP_016 MFYAVLGIPLTLVMFQSLGERMNTFVRYLL
10 20 30
150 160 170 180 190 200
pF1KE5 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE5 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE5 RASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCTCYRSQDYGGRSVAPQNSFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCTCYRSQDYGGRSVAPQNSFSA
160 170 180 190 200 210
330 340 350 360 370
pF1KE5 KLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHSFTDHQRLMKRRKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLHSFTDHQRLMKRRKSV
220 230 240 250 260
>>NP_002237 (OMIM: 603220,615344) potassium channel subf (394 aa)
initn: 1442 init1: 1329 opt: 1329 Z-score: 1515.0 bits: 289.1 E(85289): 1.2e-77
Smith-Waterman score: 1415; 59.2% identity (77.5% similar) in 395 aa overlap (1-374:1-394)
10 20 30 40 50 60
pF1KE5 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
:::::::::.:::::::::::::::::::::. :. :...:. .. .....::.:. :.
NP_002 MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLELRQQELRARYNLSQGGYE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
.:: :.:. .::.:::::.::::::::::::::::::::::.::.::.::::::.:::::
NP_002 ELERVVLRLKPHKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
:::::::::::.::.:::::.: :: ::: .:::: ::: .:::::..::::::::::.
NP_002 TLVMFQSLGERINTLVRYLLHRAKKGLGMRRADVSMANMVLIGFFSCISTLCIGAAAFSH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
:.:.::.::::::::::::::::::::: ::: .: ::::::.:::.::::::::::
NP_002 YEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLN
190 200 210 220 230 240
250 260 270 280
pF1KE5 LVVLRFLTMNSEDERRDAEERASLA------GNRNSMVIHIPEEPRPS--------RPRY
::::::.:::.:::.::::.:: :. :. .. : . . : :
NP_002 LVVLRFMTMNAEDEKRDAEHRALLTRNGQAGGGGGGGSAHTTDTASSTAAAGGGGFRNVY
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE5 KADVPDLQSVCSCTCYRSQD---YGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLK
:.: .::.::: :.:.. :. . :.. .. . :: . : . .
NP_002 -AEVLHFQSMCSCLWYKSREKLQYSIPMIIPRDLSTSDTCVEQSHSSPGGGGRYSDTPSR
310 320 330 340 350
350 360 370
pF1KE5 NSLF---P-SPISSISPGLHSFTDHQRLMKRRKSV
: : : :::.: ::::.. . :::::.::
NP_002 RCLCSGAPRSAISSVSTGLHSLSTFRGLMKRRSSV
360 370 380 390
>>XP_011515405 (OMIM: 605874,612292) PREDICTED: potassiu (291 aa)
initn: 1169 init1: 1169 opt: 1169 Z-score: 1335.1 bits: 255.4 E(85289): 1.3e-67
Smith-Waterman score: 1169; 100.0% identity (100.0% similar) in 175 aa overlap (111-285:1-175)
90 100 110 120 130 140
pF1KE5 AGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLL
::::::::::::::::::::::::::::::
XP_011 MFYAVLGIPLTLVMFQSLGERMNTFVRYLL
10 20 30
150 160 170 180 190 200
pF1KE5 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE5 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE5 RASLAGNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSCTCYRSQDYGGRSVAPQNSFSA
:::::::::::::::::::::::::
XP_011 RASLAGNRNSMVIHIPEEPRPSRPRGTNCTFKRGVRGCWVSLPKPNTASGFLPSQVDLCC
160 170 180 190 200 210
>>NP_071753 (OMIM: 607368) potassium channel subfamily K (330 aa)
initn: 1119 init1: 1096 opt: 1104 Z-score: 1260.5 bits: 241.7 E(85289): 1.8e-63
Smith-Waterman score: 1104; 60.8% identity (80.8% similar) in 291 aa overlap (1-290:1-289)
10 20 30 40 50 60
pF1KE5 MKRQNVRTLSLIVCTFTYLLVGAAVFDALESDHEMREEEKLKAEEIRIKGKYNISSEDYR
:.: .::. .:..::. ::::::::::::::. : ... : .. .. :...:.::::
NP_071 MRRPSVRAAGLVLCTLCYLLVGAAVFDALESEAESGRQRLLVQKRGALRRKFGFSAEDYR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 QLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPL
.:: . ::.:::::: :::: ::::::::::::: :::::::::.::.::::::.:::::
NP_071 ELERLALQAEPHRAGRQWKFPGSFYFAITVITTIEYGHAAPGTDSGKVFCMFYALLGIPL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 TLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQ
::: :::::::.:. :: :: : : :.: : :: ::.:..:...: .:: .::.:::.
NP_071 TLVTFQSLGERLNAVVRRLLLAAKCCLGLRWTCVSTENLVVAGLLACAATLALGAVAFSH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLN
: :.:::::::::::::::::::.::::. :::.: ::::::.:::.::::::::::
NP_071 FEGWTFFHAYYYCFITLTTIGFGDFVALQSGEALQRKLPYVAFSFLYILLGLTVIGAFLN
190 200 210 220 230 240
250 260 270 280 290
pF1KE5 LVVLRFLTMNSEDERRDAEERASLA-GNRNSMVIHIPEEPRPSRPRYKADVPDLQSVCSC
:::::::. ... .: :. . : .: . .:. ::.: .:.:
NP_071 LVVLRFLVASADWPERAARTPSPRPPGAPESRGLWLPR--RPARSVGSASVFCHVHKLER
250 260 270 280 290
300 310 320 330 340 350
pF1KE5 TCYRSQDYGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLFPSPISSISPGLH
NP_071 CARDNLGFSPPSSPGVVRGGQAPRLGARWKSI
300 310 320 330
>>XP_005264350 (OMIM: 603220,615344) PREDICTED: potassiu (284 aa)
initn: 922 init1: 809 opt: 809 Z-score: 926.2 bits: 179.7 E(85289): 7.5e-45
Smith-Waterman score: 895; 55.4% identity (71.6% similar) in 285 aa overlap (111-374:1-284)
90 100 110 120 130 140
pF1KE5 AGSFYFAITVITTIGYGHAAPGTDAGKAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLL
::::.::::::::::::::::.::.:::::
XP_005 MFYALLGIPLTLVMFQSLGERINTLVRYLL
10 20 30
150 160 170 180 190 200
pF1KE5 KRIKKCCGMRNTDVSMENMVTVGFFSCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTI
.: :: ::: .:::: ::: .:::::..::::::::::. :.:.::.::::::::::::
XP_005 HRAKKGLGMRRADVSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTI
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE5 GFGDYVALQTKGALQKKPLYVAFSFMYILVGLTVIGAFLNLVVLRFLTMNSEDERRDAEE
::::::::: ::: .: ::::::.:::.::::::::::::::::.:::.:::.::::.
XP_005 GFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNLVVLRFMTMNAEDEKRDAEH
100 110 120 130 140 150
270 280 290 300
pF1KE5 RASLA------GNRNSMVIHIPEEPRPS--------RPRYKADVPDLQSVCSCTCYRSQD
:: :. :. .. : . . : : :.: .::.::: :.:..
XP_005 RALLTRNGQAGGGGGGGSAHTTDTASSTAAAGGGGFRNVY-AEVLHFQSMCSCLWYKSRE
160 170 180 190 200
310 320 330 340 350
pF1KE5 ---YGGRSVAPQNSFSAKLAPHYFHSISYKIEEISPSTLKNSLF---P-SPISSISPGLH
:. . :.. .. . :: . : . . : : : :::.: :::
XP_005 KLQYSIPMIIPRDLSTSDTCVEQSHSSPGGGGRYSDTPSRRCLCSGAPRSAISSVSTGLH
210 220 230 240 250 260
360 370
pF1KE5 SFTDHQRLMKRRKSV
:.. . :::::.::
XP_005 SLSTFRGLMKRRSSV
270 280
>>XP_011535142 (OMIM: 605873) PREDICTED: potassium chann (410 aa)
initn: 353 init1: 197 opt: 389 Z-score: 446.6 bits: 91.4 E(85289): 3.9e-18
Smith-Waterman score: 392; 28.1% identity (61.2% similar) in 317 aa overlap (77-371:23-329)
50 60 70 80 90 100
pF1KE5 RIKGKYNISSEDYRQLELVILQSEPHRAGVQWKFAGSFYFAITVITTIGYGHAAPGTDAG
.: ....:.:: :::::::::. ::.:..:
XP_011 MHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIGYGNIAPSTEGG
10 20 30 40 50
110 120 130 140 150 160
pF1KE5 KAFCMFYAVLGIPLTLVMFQSLGERMNTFVRYLLKRIKKCCGMRNTDVSMENM--VTVGF
: ::..::..:::: .. ..:....:. . :..: .:. .::. .. ... .
XP_011 KIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKV--FRKKQVSQTKIRVISTIL
60 70 80 90 100 110
170 180 190 200 210 220
pF1KE5 F---SCMGTLCIGAAAFSQCEEWSFFHAYYYCFITLTTIGFGDYVALQTKGALQKKPLYV
: .:. . : :. :. : :. ... :. .::::.::::.:: . : .. . :
XP_011 FILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAG-INYREWYK
120 130 140 150 160
230 240 250 260 270
pF1KE5 AFSFMYILVGLTVIGAFLNLV--VLRFLTMNSEDERRDAEERASLAGNRNSMVIHIPEEP
. ...:::::. ..: :... :: :. .. :: . . .. .. :
XP_011 PLVWFWILVGLAYFAAVLSMIGDWLRVLS------KKTKEEVGEIKAHAAEWKANVTAEF
170 180 190 200 210 220
280 290 300 310 320 330
pF1KE5 RPSRPRYKADVPD-LQSVCSCTCYRSQDYG--GRS-----VAPQN-SFSAKLAPHYFHSI
: .: : .... : :: . . .. . : :. ..:.. : : : :..
XP_011 RETRRRLSVEIHDKLQRAATIRSMERRRLGLDQRAHSLDMLSPEKRSVFAALDTGRFKAS
230 240 250 260 270 280
340 350 360 370
pF1KE5 SYKIEEISPSTLKNSLFPSPISSISPG------LHSFTDHQRLMKRRKSV
: . . :..:. . : ... . : ...: . .:: ::.
XP_011 SQESINNRPNNLRLKG-PEQLNKHGQGASEDNIINKFGSTSRLTKRKNKDLKKTLPEDVQ
290 300 310 320 330 340
XP_011 KIYKTFRNYSLDEEKKEEETEKMCNSDNSSTAMLTDCIQQHAELENGMIPTDTKDREPEN
350 360 370 380 390 400
374 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:13:42 2016 done: Tue Nov 8 04:13:43 2016
Total Scan time: 7.290 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]