Result of FASTA (omim) for
pFN21AE5007
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5007, 344 aa
1>>>pF1KE5007 344 - 344 aa - 344 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0417+/-0.00046; mu= 3.5091+/- 0.029
mean_var=411.6690+/-84.309, 0's: 0 Z-trim(121.3): 293 B-trim: 884 in 1/57
Lambda= 0.063212
statistics sampled from 37355 (37729) to 37355 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.442), width: 16
Scan time: 8.430
The best scores are: opt bits E(85289)
NP_006266 (OMIM: 601944) serine/arginine-rich spli ( 344) 2254 219.3 9.9e-57
NP_005617 (OMIM: 601940) serine/arginine-rich spli ( 494) 1385 140.3 8.7e-33
XP_011540253 (OMIM: 601940) PREDICTED: serine/argi ( 464) 1381 139.9 1.1e-32
NP_001034554 (OMIM: 600914) serine/arginine-rich s ( 272) 1036 108.1 2.4e-23
NP_001307143 (OMIM: 600914) serine/arginine-rich s ( 272) 1036 108.1 2.4e-23
NP_008856 (OMIM: 600914) serine/arginine-rich spli ( 272) 1036 108.1 2.4e-23
XP_016877082 (OMIM: 600914) PREDICTED: serine/argi ( 271) 1027 107.2 4.2e-23
XP_005268057 (OMIM: 600914) PREDICTED: serine/argi ( 271) 1027 107.2 4.2e-23
XP_005268056 (OMIM: 600914) PREDICTED: serine/argi ( 271) 1027 107.2 4.2e-23
XP_011535379 (OMIM: 600914) PREDICTED: serine/argi ( 239) 656 73.3 5.9e-13
NP_008855 (OMIM: 600812) serine/arginine-rich spli ( 248) 598 68.1 2.4e-11
XP_016877083 (OMIM: 600914) PREDICTED: serine/argi ( 145) 494 58.2 1.2e-08
NP_001071634 (OMIM: 600812) serine/arginine-rich s ( 201) 449 54.3 2.6e-07
NP_115285 (OMIM: 603269) serine/arginine-rich spli ( 282) 365 46.9 6.3e-05
XP_016872631 (OMIM: 603269) PREDICTED: serine/argi ( 282) 365 46.9 6.3e-05
XP_016855590 (OMIM: 605221) PREDICTED: serine/argi ( 167) 313 41.8 0.0013
XP_016855589 (OMIM: 605221) PREDICTED: serine/argi ( 167) 313 41.8 0.0013
XP_016855591 (OMIM: 605221) PREDICTED: serine/argi ( 167) 313 41.8 0.0013
XP_016858320 (OMIM: 602010) PREDICTED: serine/argi ( 293) 318 42.6 0.0013
XP_016858321 (OMIM: 602010) PREDICTED: serine/argi ( 293) 318 42.6 0.0013
XP_016858323 (OMIM: 602010) PREDICTED: serine/argi ( 293) 318 42.6 0.0013
XP_016858322 (OMIM: 602010) PREDICTED: serine/argi ( 293) 318 42.6 0.0013
XP_016858319 (OMIM: 602010) PREDICTED: serine/argi ( 293) 318 42.6 0.0013
XP_016858318 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858313 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858317 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858312 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858314 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858316 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858311 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_016858315 (OMIM: 602010) PREDICTED: serine/argi ( 294) 318 42.6 0.0013
XP_005255283 (OMIM: 606032) PREDICTED: serine/argi (2751) 338 45.8 0.0013
NP_057417 (OMIM: 606032) serine/arginine repetitiv (2752) 338 45.8 0.0013
NP_473357 (OMIM: 605221) serine/arginine-rich spli ( 262) 313 42.1 0.0016
XP_016858302 (OMIM: 602010) PREDICTED: serine/argi ( 483) 318 42.9 0.0017
NP_001177916 (OMIM: 602010) serine/arginine-rich s ( 483) 318 42.9 0.0017
XP_011540729 (OMIM: 602010) PREDICTED: serine/argi ( 484) 318 42.9 0.0017
NP_004759 (OMIM: 602010) serine/arginine-rich spli ( 484) 318 42.9 0.0017
XP_016858301 (OMIM: 602010) PREDICTED: serine/argi ( 484) 318 42.9 0.0017
NP_976225 (OMIM: 604347) zinc finger Ran-binding d ( 330) 314 42.3 0.0017
NP_001278340 (OMIM: 182465,617140) protein SON iso (2108) 329 44.8 0.002
NP_115571 (OMIM: 182465,617140) protein SON isofor (2303) 329 44.9 0.0021
NP_620305 (OMIM: 182465,617140) protein SON isofor (2426) 329 44.9 0.0021
NP_005446 (OMIM: 604347) zinc finger Ran-binding d ( 320) 297 40.8 0.005
XP_016861969 (OMIM: 161565) PREDICTED: NK-tumor re (1094) 306 42.3 0.0057
XP_016861963 (OMIM: 161565) PREDICTED: NK-tumor re (1435) 306 42.5 0.0067
NP_005376 (OMIM: 161565) NK-tumor recognition prot (1462) 306 42.5 0.0068
>>NP_006266 (OMIM: 601944) serine/arginine-rich splicing (344 aa)
initn: 2254 init1: 2254 opt: 2254 Z-score: 1139.5 bits: 219.3 E(85289): 9.9e-57
Smith-Waterman score: 2254; 100.0% identity (100.0% similar) in 344 aa overlap (1-344:1-344)
10 20 30 40 50 60
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 DKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSR
250 260 270 280 290 300
310 320 330 340
pF1KE5 SNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
::::::::::::::::::::::::::::::::::::::::::::
NP_006 SNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
310 320 330 340
>>NP_005617 (OMIM: 601940) serine/arginine-rich splicing (494 aa)
initn: 1340 init1: 840 opt: 1385 Z-score: 709.6 bits: 140.3 E(85289): 8.7e-33
Smith-Waterman score: 1427; 66.5% identity (82.0% similar) in 361 aa overlap (1-344:1-352)
10 20 30 40 50 60
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL
:::::::::::..::.:..:::.:::..::::::::::::::.: :::::::::::::.:
NP_005 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR
::::::::::::::: :: :::: : .::. :: :::::::::.::::::::::::::
NP_005 CGERVIVEHARGPRR--DG-SYGS--GRSGYGYRR-SGRDKYGPPTRTEYRLIVENLSSR
70 80 90 100 110
130 140 150 160 170 180
pF1KE5 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE
::::::::.:::::::::::::: : ::::::: :::::::::.::::::.:::.:::.:
NP_005 CSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVE
120 130 140 150 160 170
190 200 210 220 230
pF1KE5 DKPRTSHRRSYSGSRSRSRSRRRSR----SRSR----RSSRSRSRSISKSRSRSRSRSKG
::: . .::::: :::.:::: ::: :::: .::.:.::: :.: :::::.:..
NP_005 DKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRS
180 190 200 210 220 230
240 250 260 270 280
pF1KE5 RSRSRSKGRKSRSKSKSKPKSDRGSHS--HSRSRSKDEYEK------SRSRSRSRSPKEN
::.:::...: .:.: :: :: ::: .:::.:::. :. . .. .::::...
NP_005 RSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRH
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE5 GKGDIKSKSRSRSQSRSNSPLPVPP-SKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSR
. ::::::::: : :..:: ... :::::.. :.:::::::.:.
NP_005 KS---KSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSK
300 310 320 330 340 350
pF1KE5 D
:
NP_005 DKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSV
360 370 380 390 400 410
>>XP_011540253 (OMIM: 601940) PREDICTED: serine/arginine (464 aa)
initn: 771 init1: 771 opt: 1381 Z-score: 707.9 bits: 139.9 E(85289): 1.1e-32
Smith-Waterman score: 1388; 66.4% identity (80.4% similar) in 363 aa overlap (1-344:1-355)
10 20 30 40 50 60
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKEL
:::::::::::..::.:..:::.:::..::::::::::::::.: :::::::::::::.:
XP_011 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSR
::::::::::::::: :: :::: : .::. :: :::::::::.::::::::::::::
XP_011 CGERVIVEHARGPRR--DG-SYGS--GRSGYGYRR-SGRDKYGPPTRTEYRLIVENLSSR
70 80 90 100 110
130 140 150 160 170 180
pF1KE5 CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE
::::::::.:::::::::::::: : ::::::: :::::::::.::::::.:::.:::.:
XP_011 CSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVE
120 130 140 150 160 170
190 200 210 220 230
pF1KE5 DKPRTSHRRSYSGSRSRSRS--RRRSRSRSRRSSRSRS-----RSISKSRSRSRSRSKGR
::: . .::::: :::.::: : ::.:::: .::::: :: :: .:::::.: :.
XP_011 DKPGSRRRRSYSRSRSHSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGK
180 190 200 210 220 230
240 250 260 270 280
pF1KE5 SRSRSKGRKSRS--------KSKSKPKSDRGSHSHSRSRSKD---EYEKSRSRSRSRSPK
:::.:: . .. : ::. : . :.:.:::::.. : :: : ::.:: .
XP_011 SRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRS-Q
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE5 ENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKS-RSRSRSS
:.. . .:.:::.. ::: : :: . . .: ::::::::::: :::.:.:
XP_011 EKSLRQSRSRSRSKGGSRSRSR-SRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGS
300 310 320 330 340 350
pF1KE5 SRD
.::
XP_011 KRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRS
360 370 380 390 400 410
>>NP_001034554 (OMIM: 600914) serine/arginine-rich splic (272 aa)
initn: 1608 init1: 522 opt: 1036 Z-score: 540.3 bits: 108.1 E(85289): 2.4e-23
Smith-Waterman score: 1048; 62.5% identity (79.3% similar) in 280 aa overlap (3-280:5-267)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
NP_001 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.::: .::::. :.: : . : : .:::: . . .:::::: ::::::::
NP_001 ELCSERVTIEHARA--RSRGGRGRGRYSDR--FSSRRPRNDRRNAPPVRTENRLIVENLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
NP_001 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSR-SRSRSRSKGRSRSR
:: ::. .:::: :::::.: :::::::: :.:: : :::::..:::::
NP_001 IE------------GSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSR
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 SKGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSR
::.: : :.: ::. ::: :.:.: .. . ..:::::::::
NP_001 SKSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
300 310 320 330 340
pF1KE5 SQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
>>NP_001307143 (OMIM: 600914) serine/arginine-rich splic (272 aa)
initn: 1608 init1: 522 opt: 1036 Z-score: 540.3 bits: 108.1 E(85289): 2.4e-23
Smith-Waterman score: 1048; 62.5% identity (79.3% similar) in 280 aa overlap (3-280:5-267)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
NP_001 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.::: .::::. :.: : . : : .:::: . . .:::::: ::::::::
NP_001 ELCSERVTIEHARA--RSRGGRGRGRYSDR--FSSRRPRNDRRNAPPVRTENRLIVENLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
NP_001 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSR-SRSRSRSKGRSRSR
:: ::. .:::: :::::.: :::::::: :.:: : :::::..:::::
NP_001 IE------------GSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSR
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 SKGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSR
::.: : :.: ::. ::: :.:.: .. . ..:::::::::
NP_001 SKSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
300 310 320 330 340
pF1KE5 SQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
>>NP_008856 (OMIM: 600914) serine/arginine-rich splicing (272 aa)
initn: 1608 init1: 522 opt: 1036 Z-score: 540.3 bits: 108.1 E(85289): 2.4e-23
Smith-Waterman score: 1048; 62.5% identity (79.3% similar) in 280 aa overlap (3-280:5-267)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
NP_008 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.::: .::::. :.: : . : : .:::: . . .:::::: ::::::::
NP_008 ELCSERVTIEHARA--RSRGGRGRGRYSDR--FSSRRPRNDRRNAPPVRTENRLIVENLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
NP_008 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSR-SRSRSRSKGRSRSR
:: ::. .:::: :::::.: :::::::: :.:: : :::::..:::::
NP_008 IE------------GSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSR
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 SKGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSR
::.: : :.: ::. ::: :.:.: .. . ..:::::::::
NP_008 SKSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
300 310 320 330 340
pF1KE5 SQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
>>XP_016877082 (OMIM: 600914) PREDICTED: serine/arginine (271 aa)
initn: 1155 init1: 550 opt: 1027 Z-score: 535.8 bits: 107.2 E(85289): 4.2e-23
Smith-Waterman score: 1044; 63.8% identity (78.9% similar) in 279 aa overlap (3-280:5-266)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
XP_016 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.::: .::::. :.: : . : : .:::: . . .:::::: ::::::::
XP_016 ELCSERVTIEHARA--RSRGGRGRGRYSDR--FSSRRPRNDRRNAPPVRTENRLIVENLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
XP_016 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRS
:: . : :: :::::::: :: :::: :::::: :: ::::::: ::::::
XP_016 IEGSKR--HR-----SRSRSRSRTRSSSRSRSRSRSRSR---KSYSRSRSRS--RSRSRS
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 KGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRS
:.: : :.: ::. ::: :.:.: .. . ..:::::::::
XP_016 KSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
300 310 320 330 340
pF1KE5 QSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
>>XP_005268057 (OMIM: 600914) PREDICTED: serine/arginine (271 aa)
initn: 1155 init1: 550 opt: 1027 Z-score: 535.8 bits: 107.2 E(85289): 4.2e-23
Smith-Waterman score: 1044; 63.8% identity (78.9% similar) in 279 aa overlap (3-280:5-266)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
XP_005 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.::: .::::. :.: : . : : .:::: . . .:::::: ::::::::
XP_005 ELCSERVTIEHARA--RSRGGRGRGRYSDR--FSSRRPRNDRRNAPPVRTENRLIVENLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
XP_005 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRS
:: . : :: :::::::: :: :::: :::::: :: ::::::: ::::::
XP_005 IEGSKR--HR-----SRSRSRSRTRSSSRSRSRSRSRSR---KSYSRSRSRS--RSRSRS
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 KGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRS
:.: : :.: ::. ::: :.:.: .. . ..:::::::::
XP_005 KSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
300 310 320 330 340
pF1KE5 QSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
>>XP_005268056 (OMIM: 600914) PREDICTED: serine/arginine (271 aa)
initn: 1155 init1: 550 opt: 1027 Z-score: 535.8 bits: 107.2 E(85289): 4.2e-23
Smith-Waterman score: 1044; 63.8% identity (78.9% similar) in 279 aa overlap (3-280:5-266)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
XP_005 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.::: .::::. :.: : . : : .:::: . . .:::::: ::::::::
XP_005 ELCSERVTIEHARA--RSRGGRGRGRYSDR--FSSRRPRNDRRNAPPVRTENRLIVENLS
70 80 90 100 110
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
XP_005 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRS
:: . : :: :::::::: :: :::: :::::: :: ::::::: ::::::
XP_005 IEGSKR--HR-----SRSRSRSRTRSSSRSRSRSRSRSR---KSYSRSRSRS--RSRSRS
180 190 200 210 220
240 250 260 270 280 290
pF1KE5 KGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRS
:.: : :.: ::. ::: :.:.: .. . ..:::::::::
XP_005 KSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
300 310 320 330 340
pF1KE5 QSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
>>XP_011535379 (OMIM: 600914) PREDICTED: serine/arginine (239 aa)
initn: 1235 init1: 502 opt: 656 Z-score: 353.5 bits: 73.3 E(85289): 5.9e-13
Smith-Waterman score: 905; 57.5% identity (71.8% similar) in 280 aa overlap (3-280:5-234)
10 20 30 40 50
pF1KE5 MPRVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGK
::.::::. .::::..:::.::::. ..::: :.::::::: ::::::::::.::
XP_011 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE5 ELCGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLS
:::.:: .:::::: ::::::::
XP_011 ELCSER-------------------------------------NAPPVRTENRLIVENLS
70 80
120 130 140 150 160 170
pF1KE5 SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRL
:: ::::::::::::::::.::::. . ::::.:: ::.:.: :..::.: :::::.:.:
XP_011 SRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
90 100 110 120 130 140
180 190 200 210 220 230
pF1KE5 IEDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSR-SRSRSRSKGRSRSR
:: ::. .:::: :::::.: :::::::: :.:: : :::::..:::::
XP_011 IE------------GSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSR
150 160 170 180 190
240 250 260 270 280 290
pF1KE5 SKGRKSRSKSKSKPKSD-RGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSR
::.: : :.: ::. ::: :.:.: .. . ..:::::::::
XP_011 SKSR-SVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
200 210 220 230
300 310 320 330 340
pF1KE5 SQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSSSRD
344 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:06:10 2016 done: Tue Nov 8 04:06:11 2016
Total Scan time: 8.430 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]