FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5002, 636 aa 1>>>pF1KE5002 636 - 636 aa - 636 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3469+/-0.000329; mu= 15.4759+/- 0.021 mean_var=90.1765+/-17.881, 0's: 0 Z-trim(116.6): 26 B-trim: 69 in 1/55 Lambda= 0.135060 statistics sampled from 27839 (27864) to 27839 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.327), width: 16 Scan time: 9.790 The best scores are: opt bits E(85289) NP_064529 (OMIM: 607436) poly(A) polymerase beta [ ( 637) 4169 822.4 0 XP_005267339 (OMIM: 605553) PREDICTED: poly(A) pol ( 699) 3519 695.8 1.3e-199 XP_005267338 (OMIM: 605553) PREDICTED: poly(A) pol ( 724) 3519 695.8 1.4e-199 NP_116021 (OMIM: 605553) poly(A) polymerase alpha ( 745) 3519 695.8 1.4e-199 XP_016876425 (OMIM: 605553) PREDICTED: poly(A) pol ( 698) 3500 692.1 1.8e-198 XP_016876424 (OMIM: 605553) PREDICTED: poly(A) pol ( 723) 3500 692.1 1.8e-198 NP_001280556 (OMIM: 605553) poly(A) polymerase alp ( 744) 3500 692.1 1.9e-198 XP_005264557 (OMIM: 616865) PREDICTED: poly(A) pol ( 714) 2539 504.8 4.2e-142 NP_075045 (OMIM: 616865) poly(A) polymerase gamma ( 736) 2539 504.8 4.3e-142 XP_005264558 (OMIM: 616865) PREDICTED: poly(A) pol ( 692) 2430 483.6 1e-135 NP_001280557 (OMIM: 605553) poly(A) polymerase alp ( 495) 1987 397.2 7.3e-110 NP_001280561 (OMIM: 605553) poly(A) polymerase alp ( 495) 1987 397.2 7.3e-110 NP_001238935 (OMIM: 605553) poly(A) polymerase alp ( 285) 1711 343.3 7e-94 XP_016860213 (OMIM: 616865) PREDICTED: poly(A) pol ( 476) 1428 288.3 4.3e-77 XP_011531343 (OMIM: 616865) PREDICTED: poly(A) pol ( 498) 1428 288.3 4.5e-77 XP_016860212 (OMIM: 616865) PREDICTED: poly(A) pol ( 498) 1428 288.3 4.5e-77 NP_001238936 (OMIM: 605553) poly(A) polymerase alp ( 238) 1234 250.3 5.7e-66 >>NP_064529 (OMIM: 607436) poly(A) polymerase beta [Homo (637 aa) initn: 4169 init1: 4169 opt: 4169 Z-score: 4389.5 bits: 822.4 E(85289): 0 Smith-Waterman score: 4169; 99.5% identity (100.0% similar) in 636 aa overlap (1-636:2-637) 10 20 30 40 50 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 MMPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQ 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RRILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCV ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 RRILVLEKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCV 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 APSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIP ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: NP_064 APSHVDRSDFFTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 ILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 ILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE5 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWS 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE5 KLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 KLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE5 SFPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 SFPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE5 GMKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSST ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 GMKITAMHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSST 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE5 STMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_064 STMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVSQ 550 560 570 580 590 600 600 610 620 630 pF1KE5 PAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL ::::::::::::::::::::::::::::::::::::: NP_064 PAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL 610 620 630 >>XP_005267339 (OMIM: 605553) PREDICTED: poly(A) polymer (699 aa) initn: 3525 init1: 3245 opt: 3519 Z-score: 3704.4 bits: 695.8 E(85289): 1.3e-199 Smith-Waterman score: 3519; 85.8% identity (93.6% similar) in 625 aa overlap (1-623:1-625) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::::::::: : :: ..::..::::::.::::::.:::.:::::.::::::::::::: XP_005 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_005 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : :::::::::::: ::::::::::::::.:::::::::::::::::::::::::::::: XP_005 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: XP_005 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: XP_005 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK ::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::: XP_005 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::: XP_005 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::. XP_005 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTS :::.:.:..::.::::::.:::: :: ::::: .:: :::::.::: .::::::: :: XP_005 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVS . ::.:: :: :::::::: :: .:::.:::::: :. :::..:::: . .::::.... XP_005 ATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT 550 560 570 580 590 600 600 610 620 630 pF1KE5 QPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL :::::: :: :.:::::: :.. : XP_005 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 610 620 630 640 650 660 >>XP_005267338 (OMIM: 605553) PREDICTED: poly(A) polymer (724 aa) initn: 3525 init1: 3245 opt: 3519 Z-score: 3704.1 bits: 695.8 E(85289): 1.4e-199 Smith-Waterman score: 3519; 85.8% identity (93.6% similar) in 625 aa overlap (1-623:1-625) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::::::::: : :: ..::..::::::.::::::.:::.:::::.::::::::::::: XP_005 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_005 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : :::::::::::: ::::::::::::::.:::::::::::::::::::::::::::::: XP_005 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: XP_005 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: XP_005 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK ::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::: XP_005 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::: XP_005 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::. XP_005 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTS :::.:.:..::.::::::.:::: :: ::::: .:: :::::.::: .::::::: :: XP_005 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVS . ::.:: :: :::::::: :: .:::.:::::: :. :::..:::: . .::::.... XP_005 ATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT 550 560 570 580 590 600 600 610 620 630 pF1KE5 QPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL :::::: :: :.:::::: :.. : XP_005 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 610 620 630 640 650 660 >>NP_116021 (OMIM: 605553) poly(A) polymerase alpha isof (745 aa) initn: 3525 init1: 3245 opt: 3519 Z-score: 3703.9 bits: 695.8 E(85289): 1.4e-199 Smith-Waterman score: 3519; 85.8% identity (93.6% similar) in 625 aa overlap (1-623:1-625) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::::::::: : :: ..::..::::::.::::::.:::.:::::.::::::::::::: NP_116 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::: NP_116 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : :::::::::::: ::::::::::::::.:::::::::::::::::::::::::::::: NP_116 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: NP_116 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: NP_116 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK ::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::: NP_116 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::: NP_116 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::. NP_116 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTS :::.:.:..::.::::::.:::: :: ::::: .:: :::::.::: .::::::: :: NP_116 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVS . ::.:: :: :::::::: :: .:::.:::::: :. :::..:::: . .::::.... NP_116 ATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT 550 560 570 580 590 600 600 610 620 630 pF1KE5 QPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL :::::: :: :.:::::: :.. : NP_116 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 610 620 630 640 650 660 >>XP_016876425 (OMIM: 605553) PREDICTED: poly(A) polymer (698 aa) initn: 3501 init1: 3253 opt: 3500 Z-score: 3684.4 bits: 692.1 E(85289): 1.8e-198 Smith-Waterman score: 3500; 85.6% identity (93.4% similar) in 625 aa overlap (1-623:1-624) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::::::::: : :: ..::..::::::.::::::.:::.:::::.::::::::::::: XP_016 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_016 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : :::::::::::: ::::::::::::::.:::::::::::::::::::::::::::::: XP_016 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: XP_016 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: XP_016 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK ::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::: XP_016 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::: XP_016 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::. XP_016 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTS :::.:.:..::.::::::.:::: :: ::::: .:: :::::.::: .::::::: :: XP_016 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVS . ::.:: :: ::: :::: :: .:::.:::::: :. :::..:::: . .::::.... XP_016 ATKTSPLNSSGSSQG-NSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT 550 560 570 580 590 600 610 620 630 pF1KE5 QPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL :::::: :: :.:::::: :.. : XP_016 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 600 610 620 630 640 650 >>XP_016876424 (OMIM: 605553) PREDICTED: poly(A) polymer (723 aa) initn: 3501 init1: 3253 opt: 3500 Z-score: 3684.1 bits: 692.1 E(85289): 1.8e-198 Smith-Waterman score: 3500; 85.6% identity (93.4% similar) in 625 aa overlap (1-623:1-624) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::::::::: : :: ..::..::::::.::::::.:::.:::::.::::::::::::: XP_016 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::: XP_016 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : :::::::::::: ::::::::::::::.:::::::::::::::::::::::::::::: XP_016 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: XP_016 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: XP_016 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK ::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::: XP_016 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::: XP_016 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::. XP_016 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTS :::.:.:..::.::::::.:::: :: ::::: .:: :::::.::: .::::::: :: XP_016 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVS . ::.:: :: ::: :::: :: .:::.:::::: :. :::..:::: . .::::.... XP_016 ATKTSPLNSSGSSQG-NSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT 550 560 570 580 590 600 610 620 630 pF1KE5 QPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL :::::: :: :.:::::: :.. : XP_016 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 600 610 620 630 640 650 >>NP_001280556 (OMIM: 605553) poly(A) polymerase alpha i (744 aa) initn: 3501 init1: 3253 opt: 3500 Z-score: 3683.9 bits: 692.1 E(85289): 1.9e-198 Smith-Waterman score: 3500; 85.6% identity (93.4% similar) in 625 aa overlap (1-623:1-624) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::::::::: : :: ..::..::::::.::::::.:::.:::::.::::::::::::: NP_001 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::: NP_001 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : :::::::::::: ::::::::::::::.:::::::::::::::::::::::::::::: NP_001 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: NP_001 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: NP_001 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK ::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::: NP_001 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::: NP_001 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::. NP_001 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSSTS :::.:.:..::.::::::.:::: :: ::::: .:: :::::.::: .::::::: :: NP_001 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAVS . ::.:: :: ::: :::: :: .:::.:::::: :. :::..:::: . .::::.... NP_001 ATKTSPLNSSGSSQG-NSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT 550 560 570 580 590 600 610 620 630 pF1KE5 QPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL :::::: :: :.:::::: :.. : NP_001 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES 600 610 620 630 640 650 >>XP_005264557 (OMIM: 616865) PREDICTED: poly(A) polymer (714 aa) initn: 2502 init1: 2502 opt: 2539 Z-score: 2672.2 bits: 504.8 E(85289): 4.2e-142 Smith-Waterman score: 2539; 63.6% identity (83.1% similar) in 615 aa overlap (20-626:19-626) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::..:::::: ::: : . ::.::....::::::.::::.. XP_005 MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNH 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :..:: :::::::::: ..::::.:: ::. .:::::::::::::::::::::::::::: XP_005 RLVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : ::.::::: ::. ::: :. ...::::..:::::::. :::::::..:::::.::: . XP_005 PRHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISD 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI .::::::: :..:::::::::::::::::::::::: ..:::::::.::::: ..::::. XP_005 NLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNM 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: XP_005 LGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVW 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK :::::::::::::::::::::::::::::: ::: ::.::::::::.: ::: .:..::: XP_005 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSK 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :.: :.:::::.::::: ::::::..:::::::::::::.:::.::.::::::::::::: XP_005 LLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQS 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::. ::. ... .:: .:. ... .:.: ..:::::::::::::::::: : .:.. : XP_005 FPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEG 420 430 440 450 460 470 490 500 510 520 530 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAG--CENSMSVPSS ::: :.:...:.::. :: ..:: :: .: :.:.: :: :.. .: . :: XP_005 MKIEATHVKKKQLHHYLPAEILQKKKKQS-----LSDVNRSSGGLQSKRLSLDSSCLDSS 480 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALN------ES .: . :. : .. .::... . :. :. . . ... ..:... .: XP_005 RDTDNGTPFNSPASKSDSPSVGETERNSAE-PAAVIVEKPLSVPPAQGLSIPVIGAKVDS 540 550 560 570 580 590 600 610 620 630 pF1KE5 IPHAVSQPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL ..:: :.. : ..:.: : : : XP_005 TVKTVSPPTVCTIP-TVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSID 600 610 620 630 640 650 XP_005 GTPKRLKDVEKDAIGGESMPIPTIDTSRKKRLPSKELPDSSSPVPANNIRVIKNSIRLTL 660 670 680 690 700 710 >>NP_075045 (OMIM: 616865) poly(A) polymerase gamma [Hom (736 aa) initn: 2502 init1: 2502 opt: 2539 Z-score: 2672.0 bits: 504.8 E(85289): 4.3e-142 Smith-Waterman score: 2539; 63.6% identity (83.1% similar) in 615 aa overlap (20-626:19-626) 10 20 30 40 50 60 pF1KE5 MPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQR ::..:::::: ::: : . ::.::....::::::.::::.. NP_075 MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNH 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 RILVLDKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA :..:: :::::::::: ..::::.:: ::. .:::::::::::::::::::::::::::: NP_075 RLVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 PSHVDRSDFFTSFYAKLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPE : ::.::::: ::. ::: :. ...::::..:::::::. :::::::..:::::.::: . NP_075 PRHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISD 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNI .::::::: :..:::::::::::::::::::::::: ..:::::::.::::: ..::::. NP_075 NLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNM 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE5 LGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVW :::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::: NP_075 LGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVW 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE5 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSK :::::::::::::::::::::::::::::: ::: ::.::::::::.: ::: .:..::: NP_075 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSK 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE5 LFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS :.: :.:::::.::::: ::::::..:::::::::::::.:::.::.::::::::::::: NP_075 LLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQS 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE5 FPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMG ::. ::. ... .:: .:. ... .:.: ..:::::::::::::::::: : .:.. : NP_075 FPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEG 420 430 440 450 460 470 490 500 510 520 530 pF1KE5 MKITAVHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAG--CENSMSVPSS ::: :.:...:.::. :: ..:: :: .: :.:.: :: :.. .: . :: NP_075 MKIEATHVKKKQLHHYLPAEILQKKKKQS-----LSDVNRSSGGLQSKRLSLDSSCLDSS 480 490 500 510 520 530 540 550 560 570 580 590 pF1KE5 TSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALN------ES .: . :. : .. .::... . :. :. . . ... ..:... .: NP_075 RDTDNGTPFNSPASKSDSPSVGETERNSAE-PAAVIVEKPLSVPPAQGLSIPVIGAKVDS 540 550 560 570 580 590 600 610 620 630 pF1KE5 IPHAVSQPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL ..:: :.. : ..:.: : : : NP_075 TVKTVSPPTVCTIP-TVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSID 600 610 620 630 640 650 NP_075 GTPKRLKDVEKFIRLESTFKDPRTAEERKRKSVDAIGGESMPIPTIDTSRKKRLPSKELP 660 670 680 690 700 710 >>XP_005264558 (OMIM: 616865) PREDICTED: poly(A) polymer (692 aa) initn: 2393 init1: 2393 opt: 2430 Z-score: 2557.7 bits: 483.6 E(85289): 1e-135 Smith-Waterman score: 2430; 63.7% identity (83.0% similar) in 589 aa overlap (46-626:1-582) 20 30 40 50 60 70 pF1KE5 PPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQRRILVLDKLNNLVKEW ..::::::.::::..:..:: ::::::::: XP_005 MKPFGVFEDEEELNHRLVVLGKLNNLVKEW 10 20 30 80 90 100 110 120 130 pF1KE5 IREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPSHVDRSDFFTSFYA : ..::::.:: ::. .::::::::::::::::::::::::::::: ::.::::: ::. XP_005 ISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFE 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE5 KLKLQEEVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDI ::: :. ...::::..:::::::. :::::::..:::::.::: ..::::::: :..::: XP_005 KLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDI 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE5 RCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVAR ::::::::::::::::::::: ..:::::::.::::: ..::::.::::::::::::::: XP_005 RCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVAR 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE5 TCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPI ::::::::.:::::.:::::::.::::::::::.::: :::::::::::::::::::::: XP_005 TCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPI 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE5 ITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYI ::::::::::::::: ::: ::.::::::::.: ::: .:..::::.: :.:::::.::: XP_005 ITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYI 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE5 VLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFRT :: ::::::..:::::::::::::.:::.::.:::::::::::::::. ::. ... . XP_005 VLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVS 340 350 360 370 380 390 440 450 460 470 480 490 pF1KE5 MWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKELHQ :: .:. ... .:.: ..:::::::::::::::::: : .:.. :::: :.:...:.::. XP_005 MWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHH 400 410 420 430 440 450 500 510 520 530 540 550 pF1KE5 LLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAG--CENSMSVPSSTSTMKTGPLISSSQG :: ..:: :: .: :.:.: :: :.. .: . :: .: . :. : .. XP_005 YLPAEILQKKKKQS-----LSDVNRSSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASK 460 470 480 490 500 560 570 580 590 600 pF1KE5 RNSPALAVMTASVANIQATEFSLQQVNTNESSGVALN------ESIPHAVSQPAISPSPK .::... . :. :. . . ... ..:... .: ..:: :.. : XP_005 SDSPSVGETERNSAE-PAAVIVEKPLSVPPAQGLSIPVIGAKVDSTVKTVSPPTVCTIP- 510 520 530 540 550 560 610 620 630 pF1KE5 AMVARVVSSTCLISHPDLQETQQQTYLIL ..:.: : : : XP_005 TVVGRNVIPRITTPHNPAQGQPHLNGMSNITKTVTPKRSHSPSIDGTPKRLKDVEKFIRL 570 580 590 600 610 620 636 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:02:51 2016 done: Tue Nov 8 04:02:52 2016 Total Scan time: 9.790 Total Display time: 0.130 Function used was FASTA [36.3.4 Apr, 2011]