FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5317, 289 aa
  1>>>pF1KE5317 289 - 289 aa - 289 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.8708+/-0.000671; mu= 5.1030+/- 0.041
 mean_var=139.5232+/-28.403, 0's: 0 Z-trim(115.4): 16  B-trim: 65 in 1/53
 Lambda= 0.108580
 statistics sampled from 15965 (15979) to 15965 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.8), E-opt: 0.2 (0.491), width:  16
 Scan time:  2.890

The best scores are:                                      opt bits E(32554)
CCDS3224.1 ZMAT3 gene_id:64393|Hs108|chr3          ( 289) 1992 322.5 2.3e-88
CCDS46962.1 ZMAT3 gene_id:64393|Hs108|chr3         ( 288) 1975 319.8 1.5e-87


>>CCDS3224.1 ZMAT3 gene_id:64393|Hs108|chr3               (289 aa)
 initn: 1992 init1: 1992 opt: 1992  Z-score: 1699.9  bits: 322.5 E(32554): 2.3e-88
Smith-Waterman score: 1992; 100.0% identity (100.0% similar) in 289 aa overlap (1-289:1-289)

               10        20        30        40        50        60
pF1KE5 MILLQHAVLPPPKQPSPSPPMSVATRSTGTLQLPPQKPFGQEASLPLAGEEELSKGGEQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MILLQHAVLPPPKQPSPSPPMSVATRSTGTLQLPPQKPFGQEASLPLAGEEELSKGGEQD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 CALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 CALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 QSNSFSESSELGQRRARKEGNEFKMMPNRRNMYTVQNNSAGPYFNPRSRQRIPRDLAMCV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 QSNSFSESSELGQRRARKEGNEFKMMPNRRNMYTVQNNSAGPYFNPRSRQRIPRDLAMCV
              190       200       210       220       230       240

              250       260       270       280         
pF1KE5 TPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVSEQRYRNEMENLGYV
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVSEQRYRNEMENLGYV
              250       260       270       280         

>>CCDS46962.1 ZMAT3 gene_id:64393|Hs108|chr3              (288 aa)
 initn: 1499 init1: 1499 opt: 1975  Z-score: 1685.5  bits: 319.8 E(32554): 1.5e-87
Smith-Waterman score: 1975; 99.7% identity (99.7% similar) in 289 aa overlap (1-289:1-288)

               10        20        30        40        50        60
pF1KE5 MILLQHAVLPPPKQPSPSPPMSVATRSTGTLQLPPQKPFGQEASLPLAGEEELSKGGEQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MILLQHAVLPPPKQPSPSPPMSVATRSTGTLQLPPQKPFGQEASLPLAGEEELSKGGEQD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 CALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 CALEELCKPLYCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 ATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ATPVVPVPPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 QSNSFSESSELGQRRARKEGNEFKMMPNRRNMYTVQNNSAGPYFNPRSRQRIPRDLAMCV
       ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::
CCDS46 QSNSFSESSELGQRRARKEGNEFKMMPNRRNMYTVQNNS-GPYFNPRSRQRIPRDLAMCV
              190       200       210        220       230         

              250       260       270       280         
pF1KE5 TPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVSEQRYRNEMENLGYV
       :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKVSEQRYRNEMENLGYV
     240       250       260       270       280        




289 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 23:45:13 2016 done: Mon Nov  7 23:45:14 2016
 Total Scan time:  2.890 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]