FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5180, 152 aa 1>>>pF1KE5180 152 - 152 aa - 152 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9985+/-0.00057; mu= 13.3877+/- 0.034 mean_var=60.5661+/-11.931, 0's: 0 Z-trim(112.5): 14 B-trim: 0 in 0/49 Lambda= 0.164801 statistics sampled from 13210 (13214) to 13210 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.788), E-opt: 0.2 (0.406), width: 16 Scan time: 1.270 The best scores are: opt bits E(32554) CCDS12535.1 RPS16 gene_id:6217|Hs108|chr19 ( 146) 543 136.6 5.6e-33 >>CCDS12535.1 RPS16 gene_id:6217|Hs108|chr19 (146 aa) initn: 540 init1: 540 opt: 543 Z-score: 705.5 bits: 136.6 E(32554): 5.6e-33 Smith-Waterman score: 543; 94.3% identity (96.6% similar) in 88 aa overlap (1-88:1-88) 10 20 30 40 50 60 pF1KE5 MPSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MPSKGPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 ERFAGVDIRVRVKGGGHVAQIYGESQELGAWRRWLWEGGLHSAPVPFNCVSFSQLSVSPS ::::::::::::::::::::::. : . CCDS12 ERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLL 70 80 90 100 110 120 152 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:20:43 2016 done: Mon Nov 7 22:20:43 2016 Total Scan time: 1.270 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]