FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5261, 186 aa 1>>>pF1KE5261 186 - 186 aa - 186 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8855+/-0.00091; mu= 15.0497+/- 0.054 mean_var=60.3305+/-12.170, 0's: 0 Z-trim(104.9): 74 B-trim: 0 in 0/50 Lambda= 0.165122 statistics sampled from 8081 (8157) to 8081 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.251), width: 16 Scan time: 1.920 The best scores are: opt bits E(32554) CCDS54604.1 SLC25A26 gene_id:115286|Hs108|chr3 ( 186) 1216 297.9 2.3e-81 CCDS2905.2 SLC25A26 gene_id:115286|Hs108|chr3 ( 274) 1216 298.0 3.2e-81 CCDS33327.1 SLC25A12 gene_id:8604|Hs108|chr2 ( 678) 258 70.1 3.3e-12 CCDS5645.1 SLC25A13 gene_id:10165|Hs108|chr7 ( 675) 244 66.7 3.3e-11 CCDS55130.1 SLC25A13 gene_id:10165|Hs108|chr7 ( 676) 244 66.7 3.4e-11 >>CCDS54604.1 SLC25A26 gene_id:115286|Hs108|chr3 (186 aa) initn: 1216 init1: 1216 opt: 1216 Z-score: 1574.1 bits: 297.9 E(32554): 2.3e-81 Smith-Waterman score: 1216; 100.0% identity (100.0% similar) in 186 aa overlap (1-186:1-186) 10 20 30 40 50 60 pF1KE5 MKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFSNILYEEGIQGLYRGYKSTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFSNILYEEGIQGLYRGYKSTV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRIT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LAKAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFIFLGAYDRTHSLLLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LAKAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFIFLGAYDRTHSLLLE 130 140 150 160 170 180 pF1KE5 VGRKSP :::::: CCDS54 VGRKSP >>CCDS2905.2 SLC25A26 gene_id:115286|Hs108|chr3 (274 aa) initn: 1216 init1: 1216 opt: 1216 Z-score: 1571.7 bits: 298.0 E(32554): 3.2e-81 Smith-Waterman score: 1216; 100.0% identity (100.0% similar) in 186 aa overlap (1-186:89-274) 10 20 30 pF1KE5 MKHMLAASAGEVVACLIRVPSEVVKQRAQV :::::::::::::::::::::::::::::: CCDS29 GSFPNAAAFFITYEYVKWFLHADSSSYLTPMKHMLAASAGEVVACLIRVPSEVVKQRAQV 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE5 SASTRTFQIFSNILYEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 SASTRTFQIFSNILYEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVD 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE5 SWQSAVCGAFAGGFAAAVTTPLDVAKTRITLAKAGSSTADGNVLSVLHGVWRSQGLAGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 SWQSAVCGAFAGGFAAAVTTPLDVAKTRITLAKAGSSTADGNVLSVLHGVWRSQGLAGLF 180 190 200 210 220 230 160 170 180 pF1KE5 AGVFPRMAAISLGGFIFLGAYDRTHSLLLEVGRKSP :::::::::::::::::::::::::::::::::::: CCDS29 AGVFPRMAAISLGGFIFLGAYDRTHSLLLEVGRKSP 240 250 260 270 >>CCDS33327.1 SLC25A12 gene_id:8604|Hs108|chr2 (678 aa) initn: 233 init1: 135 opt: 258 Z-score: 332.6 bits: 70.1 E(32554): 3.3e-12 Smith-Waterman score: 258; 37.6% identity (65.2% similar) in 141 aa overlap (20-157:446-584) 10 20 30 40 pF1KE5 MKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFS--NILYEE : :.:: : ::.. : : :.: . CCDS33 KFTRRDGSVPLPAEVLAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLRDL 420 430 440 450 460 470 50 60 70 80 90 100 pF1KE5 GIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAA :: :::.: :. ::.:::: . ::.. : : . .. :: . . . ::.:: ::. CCDS33 GIFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENGHV-GGLNLLAAGAMAGVPAAS 480 490 500 510 520 530 110 120 130 140 150 160 pF1KE5 VTTPLDVAKTRITLA-KAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFI ..:: :: :::. .: .::..: .: :.. .. . : .: .... :. :. CCDS33 LVTPADVIKTRLQVAARAGQTTYSG-VIDCFRKILREEGPSAFWKGTAARVFRSSPQFGV 540 550 560 570 580 590 170 180 pF1KE5 FLGAYDRTHSLLLEVGRKSP CCDS33 TLVTYELLQRWFYIDFGGLKPAGSEPTPKSRIADLPPANPDHIGGYRLATATFAGIENKF 600 610 620 630 640 650 >>CCDS5645.1 SLC25A13 gene_id:10165|Hs108|chr7 (675 aa) initn: 208 init1: 111 opt: 244 Z-score: 314.6 bits: 66.7 E(32554): 3.3e-11 Smith-Waterman score: 244; 35.5% identity (64.5% similar) in 141 aa overlap (20-157:448-586) 10 20 30 40 pF1KE5 MKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFS--NILYEE : :.:: : ::.. : : ... . CCDS56 KFMHKDGSVPLAAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALSVVRDL 420 430 440 450 460 470 50 60 70 80 90 100 pF1KE5 GIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAA :. :.:.: :. ::.:::: . :: . .:: .. .: :. . . ::.:: ::. CCDS56 GFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFA-NEDGQVSPGSLLLAGAIAGMPAAS 480 490 500 510 520 530 110 120 130 140 150 160 pF1KE5 VTTPLDVAKTRITLA-KAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFI ..:: :: :::. .: .::..: .: :.. .. . : .: .:. :. :. CCDS56 LVTPADVIKTRLQVAARAGQTTYSG-VIDCFRKILREEGPKALWKGAGARVFRSSPQFGV 540 550 560 570 580 590 170 180 pF1KE5 FLGAYDRTHSLLLEVGRKSP CCDS56 TLLTYELLQRWFYIDFGGVKPMGSEPVPKSRINLPAPNPDHVGGYKLAVATFAGIENKFG 600 610 620 630 640 650 >>CCDS55130.1 SLC25A13 gene_id:10165|Hs108|chr7 (676 aa) initn: 208 init1: 111 opt: 244 Z-score: 314.6 bits: 66.7 E(32554): 3.4e-11 Smith-Waterman score: 244; 35.5% identity (64.5% similar) in 141 aa overlap (20-157:449-587) 10 20 30 40 pF1KE5 MKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFS--NILYEE : :.:: : ::.. : : ... . CCDS55 KFMHKDGSVPLAAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALSVVRDL 420 430 440 450 460 470 50 60 70 80 90 100 pF1KE5 GIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWSWRQDHVVDSWQSAVCGAFAGGFAAA :. :.:.: :. ::.:::: . :: . .:: .. .: :. . . ::.:: ::. CCDS55 GFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFA-NEDGQVSPGSLLLAGAIAGMPAAS 480 490 500 510 520 530 110 120 130 140 150 160 pF1KE5 VTTPLDVAKTRITLA-KAGSSTADGNVLSVLHGVWRSQGLAGLFAGVFPRMAAISLGGFI ..:: :: :::. .: .::..: .: :.. .. . : .: .:. :. :. CCDS55 LVTPADVIKTRLQVAARAGQTTYSG-VIDCFRKILREEGPKALWKGAGARVFRSSPQFGV 540 550 560 570 580 590 170 180 pF1KE5 FLGAYDRTHSLLLEVGRKSP CCDS55 TLLTYELLQRWFYIDFGGVKPMGSEPVPKSRINLPAPNPDHVGGYKLAVATFAGIENKFG 600 610 620 630 640 650 186 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:58:37 2016 done: Mon Nov 7 22:58:37 2016 Total Scan time: 1.920 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]